RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
SDC2-206ENST00000521590 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
SDC2-206ENST00000521590 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
SDC2-206ENST00000521590 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
SDC2-206ENST00000521590 FOXD1Q16676 465 aa14.73□□□□□ -0.05
SDC2-206ENST00000521590 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
SDC2-206ENST00000521590 MSH5O43196 834 aa13.77□□□□□ -0.21
SDC2-206ENST00000521590 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
SDC2-206ENST00000521590 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
SDC2-206ENST00000521590 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
SDC2-206ENST00000521590 NISCHQ9Y2I1 1504 aa13.61□□□□□ -0.23
SDC2-206ENST00000521590 ADRA2BP18089 450 aa13.58□□□□□ -0.24
SDC2-206ENST00000521590 ABCC9O60706 1549 aa13.27□□□□□ -0.29
SDC2-206ENST00000521590 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
SDC2-206ENST00000521590 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
SDC2-206ENST00000521590 CCDC180Q9P1Z9 1646 aa12.58□□□□□ -0.4
SDC2-206ENST00000521590 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
SDC2-206ENST00000521590 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
SDC2-206ENST00000521590 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
SDC2-206ENST00000521590 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
SDC2-206ENST00000521590 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
SDC2-206ENST00000521590 UNC13AQ9UPW8 1703 aa12.18□□□□□ -0.46
SDC2-206ENST00000521590 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
SDC2-206ENST00000521590 NACADO15069 1562 aa12.04□□□□□ -0.48
SDC2-206ENST00000521590 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
SDC2-206ENST00000521590 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
SDC2-206ENST00000521590 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
SDC2-206ENST00000521590 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
SDC2-206ENST00000521590 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
SDC2-206ENST00000521590 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
SDC2-206ENST00000521590 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
SDC2-206ENST00000521590 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
SDC2-206ENST00000521590 EIF4G1Q04637 1599 aaKnown RBP11.76□□□□□ -0.53
SDC2-206ENST00000521590 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
SDC2-206ENST00000521590 CUX2O14529 1486 aa11.74□□□□□ -0.53
SDC2-206ENST00000521590 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
SDC2-206ENST00000521590 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
SDC2-206ENST00000521590 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
SDC2-206ENST00000521590 MYO15BQ96JP2 1530 aa11.62□□□□□ -0.55
SDC2-206ENST00000521590 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
SDC2-206ENST00000521590 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
SDC2-206ENST00000521590 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
SDC2-206ENST00000521590 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
SDC2-206ENST00000521590 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
SDC2-206ENST00000521590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■□□□ 11.4
SDC2-206ENST00000521590 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
SDC2-206ENST00000521590 NESP48681 1621 aa11.22□□□□□ -0.61
SDC2-206ENST00000521590 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
SDC2-206ENST00000521590 NCAPD3P42695 1498 aa11.13□□□□□ -0.63
SDC2-206ENST00000521590 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
SDC2-206ENST00000521590 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
SDC2-206ENST00000521590 ZCCHC6Q5VYS8 1495 aaKnown RBP11.1□□□□□ -0.63
SDC2-206ENST00000521590 KIF21AQ7Z4S6 1674 aa11.1□□□□□ -0.63
SDC2-206ENST00000521590 RIMBP3CA6NJZ7 1639 aa11.08□□□□□ -0.64
SDC2-206ENST00000521590 RIMBP3BA6NNM3 1639 aa11.08□□□□□ -0.64
SDC2-206ENST00000521590 RIMBP3Q9UFD9 1639 aa11.08□□□□□ -0.64
SDC2-206ENST00000521590 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
SDC2-206ENST00000521590 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
SDC2-206ENST00000521590 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
SDC2-206ENST00000521590 LAMC3Q9Y6N6 1575 aa11□□□□□ -0.65
SDC2-206ENST00000521590 DSG3P32926 999 aa10.98□□□□□ -0.65
SDC2-206ENST00000521590 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
SDC2-206ENST00000521590 KCNA4P22459 653 aa10.97□□□□□ -0.65
SDC2-206ENST00000521590 HMGXB3Q12766 1538 aa10.97□□□□□ -0.65
SDC2-206ENST00000521590 CAPN15O75808 1086 aa10.96□□□□□ -0.65
SDC2-206ENST00000521590 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
SDC2-206ENST00000521590 ILDR1Q86SU0 546 aaPredicted RBP10.93□□□□□ -0.66
SDC2-206ENST00000521590 ARHGEF11O15085 1522 aa10.93□□□□□ -0.66
SDC2-206ENST00000521590 WDR62O43379 1518 aa10.91□□□□□ -0.66
SDC2-206ENST00000521590 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
SDC2-206ENST00000521590 PDS5BQ9NTI5 1447 aa10.9□□□□□ -0.66
SDC2-206ENST00000521590 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
SDC2-206ENST00000521590 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
SDC2-206ENST00000521590 POTEHQ6S545 545 aa10.8□□□□□ -0.68
SDC2-206ENST00000521590 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
SDC2-206ENST00000521590 BAZ1BQ9UIG0 1483 aaKnown RBP10.79□□□□□ -0.68
SDC2-206ENST00000521590 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
SDC2-206ENST00000521590 ABCB7O75027 752 aa10.73□□□□□ -0.69
SDC2-206ENST00000521590 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
SDC2-206ENST00000521590 PEG3Q9GZU2 1588 aa10.72□□□□□ -0.69
SDC2-206ENST00000521590 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
SDC2-206ENST00000521590 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
SDC2-206ENST00000521590 APLP2Q06481 763 aa10.63□□□□□ -0.71
SDC2-206ENST00000521590 CHD1O14646 1710 aa10.61□□□□□ -0.71
SDC2-206ENST00000521590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
SDC2-206ENST00000521590 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
SDC2-206ENST00000521590 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
SDC2-206ENST00000521590 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
SDC2-206ENST00000521590 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
SDC2-206ENST00000521590 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
SDC2-206ENST00000521590 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
SDC2-206ENST00000521590 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
SDC2-206ENST00000521590 MROH2BQ7Z745 1585 aa10.49□□□□□ -0.73
SDC2-206ENST00000521590 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
SDC2-206ENST00000521590 IFT140Q96RY7 1462 aa10.48□□□□□ -0.73
SDC2-206ENST00000521590 CFTRP13569 1480 aa10.46□□□□□ -0.74
SDC2-206ENST00000521590 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
SDC2-206ENST00000521590 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
SDC2-206ENST00000521590 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
SDC2-206ENST00000521590 POLA2Q14181 598 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms