RNA–Protein interactions for RNA: ENST00000424390.1

PRDX1-204, Transcript of peroxiredoxin 1, humanhuman

TSL 2

Gene PRDX1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX1-204ENST00000424390 NISCHQ9Y2I1 1504 aa34.46■■■■□ 3.11
PRDX1-204ENST00000424390 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
PRDX1-204ENST00000424390 ABCC9O60706 1549 aa30.67■■■□□ 2.5
PRDX1-204ENST00000424390 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
PRDX1-204ENST00000424390 NACADO15069 1562 aa29.24■■■□□ 2.27
PRDX1-204ENST00000424390 MYO15BQ96JP2 1530 aa28.97■■■□□ 2.23
PRDX1-204ENST00000424390 UNC13AQ9UPW8 1703 aa28.9■■■□□ 2.22
PRDX1-204ENST00000424390 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
PRDX1-204ENST00000424390 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
PRDX1-204ENST00000424390 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
PRDX1-204ENST00000424390 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
PRDX1-204ENST00000424390 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
PRDX1-204ENST00000424390 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
PRDX1-204ENST00000424390 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
PRDX1-204ENST00000424390 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
PRDX1-204ENST00000424390 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
PRDX1-204ENST00000424390 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
PRDX1-204ENST00000424390 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
PRDX1-204ENST00000424390 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
PRDX1-204ENST00000424390 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
PRDX1-204ENST00000424390 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
PRDX1-204ENST00000424390 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
PRDX1-204ENST00000424390 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
PRDX1-204ENST00000424390 BAZ1AQ9NRL2 1556 aaPredicted RBP26.77■■□□□ 1.88
PRDX1-204ENST00000424390 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
PRDX1-204ENST00000424390 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
PRDX1-204ENST00000424390 CUX2O14529 1486 aa26.55■■□□□ 1.84
PRDX1-204ENST00000424390 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
PRDX1-204ENST00000424390 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
PRDX1-204ENST00000424390 NESP48681 1621 aa26.41■■□□□ 1.82
PRDX1-204ENST00000424390 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
PRDX1-204ENST00000424390 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
PRDX1-204ENST00000424390 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
PRDX1-204ENST00000424390 WIZO95785 1651 aa26.23■■□□□ 1.79
PRDX1-204ENST00000424390 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
PRDX1-204ENST00000424390 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
PRDX1-204ENST00000424390 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
PRDX1-204ENST00000424390 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
PRDX1-204ENST00000424390 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
PRDX1-204ENST00000424390 WDR62O43379 1518 aa25.93■■□□□ 1.74
PRDX1-204ENST00000424390 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
PRDX1-204ENST00000424390 CFTRP13569 1480 aa25.85■■□□□ 1.73
PRDX1-204ENST00000424390 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
PRDX1-204ENST00000424390 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
PRDX1-204ENST00000424390 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
PRDX1-204ENST00000424390 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
PRDX1-204ENST00000424390 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
PRDX1-204ENST00000424390 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
PRDX1-204ENST00000424390 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
PRDX1-204ENST00000424390 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
PRDX1-204ENST00000424390 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
PRDX1-204ENST00000424390 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
PRDX1-204ENST00000424390 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
PRDX1-204ENST00000424390 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
PRDX1-204ENST00000424390 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
PRDX1-204ENST00000424390 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.6
PRDX1-204ENST00000424390 CHD1O14646 1710 aa25.03■■□□□ 1.6
PRDX1-204ENST00000424390 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
PRDX1-204ENST00000424390 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
PRDX1-204ENST00000424390 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
PRDX1-204ENST00000424390 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
PRDX1-204ENST00000424390 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
PRDX1-204ENST00000424390 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
PRDX1-204ENST00000424390 CUX1P39880 1505 aa24.93■■□□□ 1.58
PRDX1-204ENST00000424390 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.588e-7■■■■□ 26.1
PRDX1-204ENST00000424390 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
PRDX1-204ENST00000424390 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
PRDX1-204ENST00000424390 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
PRDX1-204ENST00000424390 SOGA1O94964 1423 aa24.85■■□□□ 1.57
PRDX1-204ENST00000424390 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
PRDX1-204ENST00000424390 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
PRDX1-204ENST00000424390 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
PRDX1-204ENST00000424390 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
PRDX1-204ENST00000424390 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
PRDX1-204ENST00000424390 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
PRDX1-204ENST00000424390 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
PRDX1-204ENST00000424390 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
PRDX1-204ENST00000424390 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
PRDX1-204ENST00000424390 ARAP1Q96P48 1450 aa24.66■■□□□ 1.54
PRDX1-204ENST00000424390 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
PRDX1-204ENST00000424390 SYNJ2O15056 1496 aa24.64■■□□□ 1.53
PRDX1-204ENST00000424390 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
PRDX1-204ENST00000424390 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
PRDX1-204ENST00000424390 FBLN2P98095 1184 aa24.54■■□□□ 1.52
PRDX1-204ENST00000424390 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
PRDX1-204ENST00000424390 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
PRDX1-204ENST00000424390 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
PRDX1-204ENST00000424390 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
PRDX1-204ENST00000424390 GRIN2AQ12879 1464 aa24.42■■□□□ 1.5
PRDX1-204ENST00000424390 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
PRDX1-204ENST00000424390 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
PRDX1-204ENST00000424390 NUP160Q12769 1436 aa24.36■■□□□ 1.49
PRDX1-204ENST00000424390 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
PRDX1-204ENST00000424390 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
PRDX1-204ENST00000424390 ERCC6L2Q5T890 1561 aa24.26■■□□□ 1.47
PRDX1-204ENST00000424390 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
PRDX1-204ENST00000424390 CUL7Q14999 1698 aa24.1■■□□□ 1.45
PRDX1-204ENST00000424390 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
PRDX1-204ENST00000424390 KIF27Q86VH2 1401 aa24■■□□□ 1.43
PRDX1-204ENST00000424390 PRG4Q92954 1404 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms