RNA–Protein interactions for RNA: ENST00000600474.1

COLGALT1-205, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 4

Gene COLGALT1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-205ENST00000600474 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
COLGALT1-205ENST00000600474 ABCC9O60706 1549 aa17.66■□□□□ 0.42
COLGALT1-205ENST00000600474 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
COLGALT1-205ENST00000600474 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
COLGALT1-205ENST00000600474 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
COLGALT1-205ENST00000600474 RB1CC1Q8TDY2 1594 aa16.4■□□□□ 0.22
COLGALT1-205ENST00000600474 ZCCHC6Q5VYS8 1495 aaKnown RBP16.28■□□□□ 0.2
COLGALT1-205ENST00000600474 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
COLGALT1-205ENST00000600474 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
COLGALT1-205ENST00000600474 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
COLGALT1-205ENST00000600474 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
COLGALT1-205ENST00000600474 NACADO15069 1562 aa16.09■□□□□ 0.17
COLGALT1-205ENST00000600474 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
COLGALT1-205ENST00000600474 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
COLGALT1-205ENST00000600474 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
COLGALT1-205ENST00000600474 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
COLGALT1-205ENST00000600474 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
COLGALT1-205ENST00000600474 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.11
COLGALT1-205ENST00000600474 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
COLGALT1-205ENST00000600474 CUX2O14529 1486 aa15.58■□□□□ 0.08
COLGALT1-205ENST00000600474 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
COLGALT1-205ENST00000600474 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
COLGALT1-205ENST00000600474 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
COLGALT1-205ENST00000600474 BAZ1AQ9NRL2 1556 aaPredicted RBP15.05■□□□□ -0
COLGALT1-205ENST00000600474 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
COLGALT1-205ENST00000600474 NESP48681 1621 aa14.99□□□□□ -0.01
COLGALT1-205ENST00000600474 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
COLGALT1-205ENST00000600474 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
COLGALT1-205ENST00000600474 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
COLGALT1-205ENST00000600474 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
COLGALT1-205ENST00000600474 WIZO95785 1651 aa14.87□□□□□ -0.03
COLGALT1-205ENST00000600474 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
COLGALT1-205ENST00000600474 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
COLGALT1-205ENST00000600474 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
COLGALT1-205ENST00000600474 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
COLGALT1-205ENST00000600474 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
COLGALT1-205ENST00000600474 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
COLGALT1-205ENST00000600474 RIMBP3CA6NJZ7 1639 aa14.69□□□□□ -0.06
COLGALT1-205ENST00000600474 RIMBP3BA6NNM3 1639 aa14.69□□□□□ -0.06
COLGALT1-205ENST00000600474 RIMBP3Q9UFD9 1639 aa14.69□□□□□ -0.06
COLGALT1-205ENST00000600474 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
COLGALT1-205ENST00000600474 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
COLGALT1-205ENST00000600474 WDR62O43379 1518 aa14.63□□□□□ -0.07
COLGALT1-205ENST00000600474 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
COLGALT1-205ENST00000600474 ARHGEF11O15085 1522 aa14.53□□□□□ -0.08
COLGALT1-205ENST00000600474 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
COLGALT1-205ENST00000600474 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
COLGALT1-205ENST00000600474 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
COLGALT1-205ENST00000600474 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
COLGALT1-205ENST00000600474 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
COLGALT1-205ENST00000600474 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
COLGALT1-205ENST00000600474 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
COLGALT1-205ENST00000600474 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
COLGALT1-205ENST00000600474 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
COLGALT1-205ENST00000600474 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
COLGALT1-205ENST00000600474 CFTRP13569 1480 aa14.26□□□□□ -0.13
COLGALT1-205ENST00000600474 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
COLGALT1-205ENST00000600474 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
COLGALT1-205ENST00000600474 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
COLGALT1-205ENST00000600474 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
COLGALT1-205ENST00000600474 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
COLGALT1-205ENST00000600474 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
COLGALT1-205ENST00000600474 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.15
COLGALT1-205ENST00000600474 CHD1O14646 1710 aa14.12□□□□□ -0.15
COLGALT1-205ENST00000600474 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
COLGALT1-205ENST00000600474 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.15
COLGALT1-205ENST00000600474 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
COLGALT1-205ENST00000600474 TOP2BQ02880 1626 aa14.06□□□□□ -0.16
COLGALT1-205ENST00000600474 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
COLGALT1-205ENST00000600474 CUX1P39880 1505 aa14.02□□□□□ -0.16
COLGALT1-205ENST00000600474 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
COLGALT1-205ENST00000600474 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
COLGALT1-205ENST00000600474 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
COLGALT1-205ENST00000600474 EEA1Q15075 1411 aa13.92□□□□□ -0.18
COLGALT1-205ENST00000600474 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
COLGALT1-205ENST00000600474 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
COLGALT1-205ENST00000600474 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
COLGALT1-205ENST00000600474 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.191e-7■■■■■ 30.7
COLGALT1-205ENST00000600474 SOGA1O94964 1423 aa13.84□□□□□ -0.19
COLGALT1-205ENST00000600474 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
COLGALT1-205ENST00000600474 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
COLGALT1-205ENST00000600474 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
COLGALT1-205ENST00000600474 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
COLGALT1-205ENST00000600474 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
COLGALT1-205ENST00000600474 GAPVD1Q14C86 1478 aa13.79□□□□□ -0.2
COLGALT1-205ENST00000600474 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
COLGALT1-205ENST00000600474 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
COLGALT1-205ENST00000600474 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
COLGALT1-205ENST00000600474 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
COLGALT1-205ENST00000600474 KIF21BO75037 1637 aa13.74□□□□□ -0.21
COLGALT1-205ENST00000600474 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
COLGALT1-205ENST00000600474 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
COLGALT1-205ENST00000600474 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
COLGALT1-205ENST00000600474 FBLN2P98095 1184 aa13.71□□□□□ -0.21
COLGALT1-205ENST00000600474 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
COLGALT1-205ENST00000600474 GOLGA3Q08378 1498 aa13.69□□□□□ -0.22
COLGALT1-205ENST00000600474 CUL7Q14999 1698 aa13.68□□□□□ -0.22
COLGALT1-205ENST00000600474 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
COLGALT1-205ENST00000600474 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
COLGALT1-205ENST00000600474 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms