Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.61■□□□□ 0.73
SSR2P43308 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.61■□□□□ 0.73
SSR2P43308 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR2P43308 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
SSR2P43308 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 BID-214ENST00000617586 542 ntTSL 5 BASIC19.61■□□□□ 0.73
SSR2P43308 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR2P43308 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.61■□□□□ 0.73
SSR2P43308 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SSR2P43308 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR2P43308 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR2P43308 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR2P43308 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR2P43308 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR2P43308 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR2P43308 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SSR2P43308 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR2P43308 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR2P43308 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR2P43308 AC011767.1-201ENST00000617410 1153 ntBASIC19.6■□□□□ 0.73
SSR2P43308 AC013268.1-206ENST00000638368 961 ntBASIC19.6■□□□□ 0.73
SSR2P43308 AC112229.1-201ENST00000639295 961 ntBASIC19.6■□□□□ 0.73
SSR2P43308 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR2P43308 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SSR2P43308 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR2P43308 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR2P43308 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR2P43308 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSR2P43308 AC007322.3-201ENST00000426526 701 ntBASIC19.59■□□□□ 0.73
SSR2P43308 CDV3P1-201ENST00000471403 739 ntBASIC19.59■□□□□ 0.73
SSR2P43308 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.59■□□□□ 0.73
SSR2P43308 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR2P43308 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SSR2P43308 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR2P43308 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.58■□□□□ 0.73
SSR2P43308 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR2P43308 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSR2P43308 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR2P43308 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.58■□□□□ 0.73
SSR2P43308 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.58■□□□□ 0.72
SSR2P43308 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.58■□□□□ 0.72
SSR2P43308 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.58■□□□□ 0.72
SSR2P43308 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.58■□□□□ 0.72
SSR2P43308 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.58■□□□□ 0.72
SSR2P43308 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SSR2P43308 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SSR2P43308 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SSR2P43308 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR2P43308 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.57■□□□□ 0.72
SSR2P43308 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SSR2P43308 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.57■□□□□ 0.72
SSR2P43308 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.57■□□□□ 0.72
SSR2P43308 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR2P43308 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.57■□□□□ 0.72
SSR2P43308 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.57■□□□□ 0.72
SSR2P43308 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SSR2P43308 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSR2P43308 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR2P43308 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SSR2P43308 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms