RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
ZNF48-201ENST00000320159 SHROOM4Q9ULL8 1493 aa37.18■■■■□ 3.54
ZNF48-201ENST00000320159 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
ZNF48-201ENST00000320159 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
ZNF48-201ENST00000320159 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
ZNF48-201ENST00000320159 CHIC1Q5VXU3 224 aa34.9■■■■□ 3.18
ZNF48-201ENST00000320159 CCDC180Q9P1Z9 1646 aa34.87■■■■□ 3.17
ZNF48-201ENST00000320159 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
ZNF48-201ENST00000320159 LOC105371045A0A1W2PR82 267 aa34.45■■■■□ 3.11
ZNF48-201ENST00000320159 PCGF6Q9BYE7 350 aa34.45■■■■□ 3.1
ZNF48-201ENST00000320159 EHMT2Q96KQ7 1210 aa34.23■■■■□ 3.07
ZNF48-201ENST00000320159 PPARGC1BQ86YN6 1023 aaKnown RBP34.03■■■■□ 3.04
ZNF48-201ENST00000320159 FAM9AQ8IZU1 332 aaPredicted RBP33.96■■■■□ 3.03
ZNF48-201ENST00000320159 HRCP23327 699 aa33.92■■■■□ 3.02
ZNF48-201ENST00000320159 SCRIBQ14160 1630 aa33.78■■■■□ 3
ZNF48-201ENST00000320159 DCAF1Q9Y4B6 1507 aa33.64■■■□□ 2.98
ZNF48-201ENST00000320159 ABCC9O60706 1549 aa33.61■■■□□ 2.97
ZNF48-201ENST00000320159 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
ZNF48-201ENST00000320159 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
ZNF48-201ENST00000320159 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
ZNF48-201ENST00000320159 CECR2Q9BXF3 1484 aa33.17■■■□□ 2.9
ZNF48-201ENST00000320159 TRIM26Q12899 539 aaPredicted RBP33.11■■■□□ 2.89
ZNF48-201ENST00000320159 TTBK1Q5TCY1 1321 aaPredicted RBP33.02■■■□□ 2.88
ZNF48-201ENST00000320159 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
ZNF48-201ENST00000320159 WIZO95785 1651 aa32.69■■■□□ 2.82
ZNF48-201ENST00000320159 PABPN1Q86U42 306 aaKnown RBP eCLIP32.6■■■□□ 2.81
ZNF48-201ENST00000320159 NACADO15069 1562 aa32.48■■■□□ 2.79
ZNF48-201ENST00000320159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.44■■■□□ 2.78
ZNF48-201ENST00000320159 ABCC8Q09428 1581 aa32.28■■■□□ 2.76
ZNF48-201ENST00000320159 RANGAP1P46060 587 aaPredicted RBP32.22■■■□□ 2.75
ZNF48-201ENST00000320159 CCER1Q8TC90 406 aaPredicted RBP32.15■■■□□ 2.74
ZNF48-201ENST00000320159 UBTFP17480 764 aaKnown RBP32.12■■■□□ 2.73
ZNF48-201ENST00000320159 CCDC88BA6NC98 1476 aa32.12■■■□□ 2.73
ZNF48-201ENST00000320159 ZEB1P37275 1124 aaPredicted RBP32.06■■■□□ 2.72
ZNF48-201ENST00000320159 SOGA1O94964 1423 aa32.03■■■□□ 2.72
ZNF48-201ENST00000320159 BAZ1AQ9NRL2 1556 aaPredicted RBP32.01■■■□□ 2.71
ZNF48-201ENST00000320159 RUSC2Q8N2Y8 1516 aa31.95■■■□□ 2.71
ZNF48-201ENST00000320159 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
ZNF48-201ENST00000320159 CSRNP3Q8WYN3 585 aa31.77■■■□□ 2.68
ZNF48-201ENST00000320159 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
ZNF48-201ENST00000320159 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
ZNF48-201ENST00000320159 CEP162Q5TB80 1403 aa31.72■■■□□ 2.67
ZNF48-201ENST00000320159 UNC13AQ9UPW8 1703 aa31.7■■■□□ 2.67
ZNF48-201ENST00000320159 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
ZNF48-201ENST00000320159 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
ZNF48-201ENST00000320159 SCAF1Q9H7N4 1312 aaKnown RBP31.64■■■□□ 2.66
ZNF48-201ENST00000320159 WRNQ14191 1432 aaPredicted RBP eCLIP31.43■■■□□ 2.62
ZNF48-201ENST00000320159 DIEXFQ68CQ4 756 aaKnown RBP31.41■■■□□ 2.62
ZNF48-201ENST00000320159 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
ZNF48-201ENST00000320159 BICRAQ9NZM4 1560 aa31.38■■■□□ 2.61
ZNF48-201ENST00000320159 YTHDC1Q96MU7 727 aaKnown RBP31.34■■■□□ 2.61
ZNF48-201ENST00000320159 NEUROD1Q13562 356 aa31.32■■■□□ 2.6
ZNF48-201ENST00000320159 SYNJ1O43426 1573 aa31.22■■■□□ 2.59
ZNF48-201ENST00000320159 APLP2Q06481 763 aa31.21■■■□□ 2.59
ZNF48-201ENST00000320159 GOLGA3Q08378 1498 aa31.2■■■□□ 2.59
ZNF48-201ENST00000320159 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
ZNF48-201ENST00000320159 ATAD2BQ9ULI0 1458 aa31.13■■■□□ 2.57
ZNF48-201ENST00000320159 CLIP1P30622 1438 aa31.12■■■□□ 2.57
ZNF48-201ENST00000320159 RAPGEF2Q9Y4G8 1499 aa31.1■■■□□ 2.57
ZNF48-201ENST00000320159 ACIN1Q9UKV3 1341 aaKnown RBP31.05■■■□□ 2.56
ZNF48-201ENST00000320159 ITGAEP38570 1179 aa31.05■■■□□ 2.56
ZNF48-201ENST00000320159 GTF3C3Q9Y5Q9 886 aa31.03■■■□□ 2.56
ZNF48-201ENST00000320159 EEA1Q15075 1411 aa31.02■■■□□ 2.56
ZNF48-201ENST00000320159 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.55
ZNF48-201ENST00000320159 ZNF316A6NFI3 1004 aaPredicted RBP30.95■■■□□ 2.54
ZNF48-201ENST00000320159 KANK4Q5T7N3 995 aaPredicted RBP30.88■■■□□ 2.53
ZNF48-201ENST00000320159 MIER1Q8N108 512 aa30.86■■■□□ 2.53
ZNF48-201ENST00000320159 VPS8Q8N3P4 1428 aa30.77■■■□□ 2.52
ZNF48-201ENST00000320159 CENPBP07199 599 aaPredicted RBP30.77■■■□□ 2.52
ZNF48-201ENST00000320159 ATP1B4Q9UN42 357 aaPredicted RBP30.75■■■□□ 2.51
ZNF48-201ENST00000320159 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
ZNF48-201ENST00000320159 P3H3Q8IVL6 736 aa30.71■■■□□ 2.51
ZNF48-201ENST00000320159 KIF21BO75037 1637 aa30.66■■■□□ 2.5
ZNF48-201ENST00000320159 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
ZNF48-201ENST00000320159 CUX1P39880 1505 aa30.48■■■□□ 2.47
ZNF48-201ENST00000320159 ARAP1Q96P48 1450 aa30.48■■■□□ 2.47
ZNF48-201ENST00000320159 KIF27Q86VH2 1401 aa30.36■■■□□ 2.45
ZNF48-201ENST00000320159 PRXQ9BXM0 1461 aa30.35■■■□□ 2.45
ZNF48-201ENST00000320159 FAM50AQ14320 339 aaKnown RBP30.34■■■□□ 2.45
ZNF48-201ENST00000320159 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
ZNF48-201ENST00000320159 CUX2O14529 1486 aa30.31■■■□□ 2.44
ZNF48-201ENST00000320159 HIRIP3Q9BW71 556 aaPredicted RBP30.27■■■□□ 2.44
ZNF48-201ENST00000320159 NCAPD3P42695 1498 aa30.26■■■□□ 2.43
ZNF48-201ENST00000320159 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.43
ZNF48-201ENST00000320159 BIVM-ERCC5R4GMW8 1640 aa30.2■■■□□ 2.42
ZNF48-201ENST00000320159 SIN3AQ96ST3 1273 aa30.18■■■□□ 2.42
ZNF48-201ENST00000320159 KCNH8Q96L42 1107 aa30.18■■■□□ 2.42
ZNF48-201ENST00000320159 PELP1Q8IZL8 1130 aaKnown RBP30.16■■■□□ 2.42
ZNF48-201ENST00000320159 IGF1RP08069 1367 aa30.16■■■□□ 2.42
ZNF48-201ENST00000320159 CFTRP13569 1480 aa30.16■■■□□ 2.42
ZNF48-201ENST00000320159 CCNB3Q8WWL7 1395 aa30.13■■■□□ 2.41
ZNF48-201ENST00000320159 CARMIL1Q5VZK9 1371 aa30.09■■■□□ 2.41
ZNF48-201ENST00000320159 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
ZNF48-201ENST00000320159 DNAJC5BQ9UF47 199 aa30.04■■■□□ 2.4
ZNF48-201ENST00000320159 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
ZNF48-201ENST00000320159 ARID3CA6NKF2 412 aa30.03■■■□□ 2.4
ZNF48-201ENST00000320159 RAB3GAP2Q9H2M9 1393 aa30.02■■■□□ 2.4
ZNF48-201ENST00000320159 FGD5Q6ZNL6 1462 aa30.02■■■□□ 2.4
ZNF48-201ENST00000320159 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.39
ZNF48-201ENST00000320159 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms