RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 NISCHQ9Y2I1 1504 aa48.61■■■■■ 5.37
SNX21-201ENST00000342644 CCDC180Q9P1Z9 1646 aa42.84■■■■■ 4.45
SNX21-201ENST00000342644 ABCC9O60706 1549 aa40.99■■■■■ 4.15
SNX21-201ENST00000342644 ZCCHC6Q5VYS8 1495 aaKnown RBP40.68■■■■■ 4.1
SNX21-201ENST00000342644 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
SNX21-201ENST00000342644 MYO15BQ96JP2 1530 aa40.18■■■■■ 4.02
SNX21-201ENST00000342644 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
SNX21-201ENST00000342644 NACADO15069 1562 aa40.07■■■■■ 4.01
SNX21-201ENST00000342644 RB1CC1Q8TDY2 1594 aa39.88■■■■□ 3.97
SNX21-201ENST00000342644 SCRIBQ14160 1630 aa39.08■■■■□ 3.85
SNX21-201ENST00000342644 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
SNX21-201ENST00000342644 SHROOM4Q9ULL8 1493 aa38.81■■■■□ 3.8
SNX21-201ENST00000342644 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
SNX21-201ENST00000342644 PABPN1Q86U42 306 aaKnown RBP eCLIP38.44■■■■□ 3.74
SNX21-201ENST00000342644 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
SNX21-201ENST00000342644 BAZ1AQ9NRL2 1556 aaPredicted RBP37.61■■■■□ 3.61
SNX21-201ENST00000342644 EIF4G1Q04637 1599 aaKnown RBP37.54■■■■□ 3.6
SNX21-201ENST00000342644 SMARCA4P51532 1647 aa37.52■■■■□ 3.6
SNX21-201ENST00000342644 MROH2BQ7Z745 1585 aa37.45■■■■□ 3.59
SNX21-201ENST00000342644 RSF1Q96T23 1441 aaPredicted RBP37.35■■■■□ 3.57
SNX21-201ENST00000342644 PEG3Q9GZU2 1588 aa37.19■■■■□ 3.54
SNX21-201ENST00000342644 CC2D2AQ9P2K1 1620 aa37.16■■■■□ 3.54
SNX21-201ENST00000342644 SMARCA2P51531 1590 aa37.1■■■■□ 3.53
SNX21-201ENST00000342644 ATAD2BQ9ULI0 1458 aa37.1■■■■□ 3.53
SNX21-201ENST00000342644 WIZO95785 1651 aa37.08■■■■□ 3.53
SNX21-201ENST00000342644 SUPT5HO00267 1087 aaKnown RBP36.99■■■■□ 3.51
SNX21-201ENST00000342644 NCAPD3P42695 1498 aa36.97■■■■□ 3.51
SNX21-201ENST00000342644 HMGXB3Q12766 1538 aa36.87■■■■□ 3.49
SNX21-201ENST00000342644 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
SNX21-201ENST00000342644 BAZ1BQ9UIG0 1483 aaKnown RBP36.81■■■■□ 3.48
SNX21-201ENST00000342644 TOP2AP11388 1531 aaKnown RBP36.76■■■■□ 3.48
SNX21-201ENST00000342644 CCDC88BA6NC98 1476 aa36.32■■■■□ 3.41
SNX21-201ENST00000342644 CADPSQ9ULU8 1353 aa35.93■■■■□ 3.34
SNX21-201ENST00000342644 CFTRP13569 1480 aa35.91■■■■□ 3.34
SNX21-201ENST00000342644 LAMC3Q9Y6N6 1575 aa35.84■■■■□ 3.33
SNX21-201ENST00000342644 NESP48681 1621 aa35.74■■■■□ 3.31
SNX21-201ENST00000342644 PRDM2Q13029 1718 aa35.7■■■■□ 3.31
SNX21-201ENST00000342644 PDS5BQ9NTI5 1447 aa35.56■■■■□ 3.28
SNX21-201ENST00000342644 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
SNX21-201ENST00000342644 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
SNX21-201ENST00000342644 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
SNX21-201ENST00000342644 ERCC6Q03468 1493 aa35.26■■■■□ 3.24
SNX21-201ENST00000342644 ABCC8Q09428 1581 aa35.22■■■■□ 3.23
SNX21-201ENST00000342644 WRNQ14191 1432 aaPredicted RBP eCLIP35.19■■■■□ 3.22
SNX21-201ENST00000342644 MRC2Q9UBG0 1479 aa35.12■■■■□ 3.21
SNX21-201ENST00000342644 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
SNX21-201ENST00000342644 CUX1P39880 1505 aa35.08■■■■□ 3.21
SNX21-201ENST00000342644 URB2Q14146 1524 aaKnown RBP35.07■■■■□ 3.2
SNX21-201ENST00000342644 DNMBPQ6XZF7 1577 aa35.07■■■■□ 3.2
SNX21-201ENST00000342644 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
SNX21-201ENST00000342644 TOP2BQ02880 1626 aa35.04■■■■□ 3.2
SNX21-201ENST00000342644 SYNJ1O43426 1573 aa35.03■■■■□ 3.2
SNX21-201ENST00000342644 BIVM-ERCC5R4GMW8 1640 aa35.02■■■■□ 3.2
SNX21-201ENST00000342644 TOPBP1Q92547 1522 aa35.02■■■■□ 3.2
SNX21-201ENST00000342644 WDR62O43379 1518 aa35■■■■□ 3.19
SNX21-201ENST00000342644 TRIM41Q8WV44 630 aa34.94■■■■□ 3.18
SNX21-201ENST00000342644 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
SNX21-201ENST00000342644 POLA1P09884 1462 aaPredicted RBP34.79■■■■□ 3.16
SNX21-201ENST00000342644 CUX2O14529 1486 aa34.67■■■■□ 3.14
SNX21-201ENST00000342644 SOGA1O94964 1423 aa34.65■■■■□ 3.14
SNX21-201ENST00000342644 IFT140Q96RY7 1462 aa34.6■■■■□ 3.13
SNX21-201ENST00000342644 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
SNX21-201ENST00000342644 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
SNX21-201ENST00000342644 ABCA10Q8WWZ4 1543 aa34.57■■■■□ 3.12
SNX21-201ENST00000342644 WDR97A6NE52 1622 aa34.51■■■■□ 3.12
SNX21-201ENST00000342644 KIF27Q86VH2 1401 aa34.4■■■■□ 3.1
SNX21-201ENST00000342644 EEA1Q15075 1411 aa34.36■■■■□ 3.09
SNX21-201ENST00000342644 ZNF608Q9ULD9 1512 aaPredicted RBP34.33■■■■□ 3.09
SNX21-201ENST00000342644 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
SNX21-201ENST00000342644 TDRD9Q8NDG6 1382 aaKnown RBP34.32■■■■□ 3.08
SNX21-201ENST00000342644 RUSC2Q8N2Y8 1516 aa34.31■■■■□ 3.08
SNX21-201ENST00000342644 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
SNX21-201ENST00000342644 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.07
SNX21-201ENST00000342644 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
SNX21-201ENST00000342644 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
SNX21-201ENST00000342644 GRIN2BQ13224 1484 aa34.15■■■■□ 3.06
SNX21-201ENST00000342644 IGF1RP08069 1367 aa34.15■■■■□ 3.06
SNX21-201ENST00000342644 CSRNP3Q8WYN3 585 aa34.14■■■■□ 3.06
SNX21-201ENST00000342644 PBRM1Q86U86 1689 aa34.13■■■■□ 3.05
SNX21-201ENST00000342644 FAM9AQ8IZU1 332 aaPredicted RBP34.12■■■■□ 3.05
SNX21-201ENST00000342644 CUL7Q14999 1698 aa34.01■■■■□ 3.03
SNX21-201ENST00000342644 MAGI1Q96QZ7 1491 aaPredicted RBP33.99■■■■□ 3.03
SNX21-201ENST00000342644 PRXQ9BXM0 1461 aa33.97■■■■□ 3.03
SNX21-201ENST00000342644 CARMIL1Q5VZK9 1371 aa33.96■■■■□ 3.03
SNX21-201ENST00000342644 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.03
SNX21-201ENST00000342644 FHAD1B1AJZ9 1412 aa33.92■■■■□ 3.02
SNX21-201ENST00000342644 ADAMTS12P58397 1594 aa33.92■■■■□ 3.02
SNX21-201ENST00000342644 KIF21BO75037 1637 aa33.9■■■■□ 3.02
SNX21-201ENST00000342644 RAPGEF2Q9Y4G8 1499 aa33.85■■■■□ 3.01
SNX21-201ENST00000342644 SYNJ2O15056 1496 aa33.83■■■■□ 3.01
SNX21-201ENST00000342644 GOLGA3Q08378 1498 aa33.76■■■□□ 2.99
SNX21-201ENST00000342644 CHMP7Q8WUX9 453 aaPredicted RBP33.72■■■□□ 2.99
SNX21-201ENST00000342644 GRIN2AQ12879 1464 aa33.71■■■□□ 2.99
SNX21-201ENST00000342644 CHD1O14646 1710 aa33.63■■■□□ 2.97
SNX21-201ENST00000342644 LOC105371045A0A1W2PR82 267 aa33.62■■■□□ 2.97
SNX21-201ENST00000342644 FBLN2P98095 1184 aa33.62■■■□□ 2.97
SNX21-201ENST00000342644 NUP160Q12769 1436 aa33.55■■■□□ 2.96
SNX21-201ENST00000342644 UBTFP17480 764 aaKnown RBP33.54■■■□□ 2.96
SNX21-201ENST00000342644 EHMT2Q96KQ7 1210 aa33.54■■■□□ 2.96
SNX21-201ENST00000342644 TNIKQ9UKE5 1360 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms