RNA–Protein interactions for RNA: ENST00000432807.1

LINC00094-201, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LINC00094, Length 2,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00094-201ENST00000432807 NISCHQ9Y2I1 1504 aa43.59■■■■■ 4.57
LINC00094-201ENST00000432807 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
LINC00094-201ENST00000432807 SHROOM4Q9ULL8 1493 aa36.96■■■■□ 3.51
LINC00094-201ENST00000432807 ZCCHC6Q5VYS8 1495 aaKnown RBP36.84■■■■□ 3.49
LINC00094-201ENST00000432807 SUPT5HO00267 1087 aaKnown RBP36.17■■■■□ 3.38
LINC00094-201ENST00000432807 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
LINC00094-201ENST00000432807 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
LINC00094-201ENST00000432807 CHIC1Q5VXU3 224 aa35.13■■■■□ 3.21
LINC00094-201ENST00000432807 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
LINC00094-201ENST00000432807 SCRIBQ14160 1630 aa34.74■■■■□ 3.15
LINC00094-201ENST00000432807 ABCC9O60706 1549 aa34.7■■■■□ 3.15
LINC00094-201ENST00000432807 RSF1Q96T23 1441 aaPredicted RBP34.43■■■■□ 3.1
LINC00094-201ENST00000432807 NACADO15069 1562 aa34.4■■■■□ 3.1
LINC00094-201ENST00000432807 LOC105371045A0A1W2PR82 267 aa34.05■■■■□ 3.04
LINC00094-201ENST00000432807 RB1CC1Q8TDY2 1594 aa34.01■■■■□ 3.03
LINC00094-201ENST00000432807 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
LINC00094-201ENST00000432807 MROH2BQ7Z745 1585 aa33.87■■■■□ 3.01
LINC00094-201ENST00000432807 PCGF6Q9BYE7 350 aa33.81■■■■□ 3
LINC00094-201ENST00000432807 TRIM41Q8WV44 630 aa33.74■■■□□ 2.99
LINC00094-201ENST00000432807 HRCP23327 699 aa33.71■■■□□ 2.99
LINC00094-201ENST00000432807 WIZO95785 1651 aa33.66■■■□□ 2.98
LINC00094-201ENST00000432807 BAZ1AQ9NRL2 1556 aaPredicted RBP33.49■■■□□ 2.95
LINC00094-201ENST00000432807 FAM9AQ8IZU1 332 aaPredicted RBP33.4■■■□□ 2.94
LINC00094-201ENST00000432807 UNC13AQ9UPW8 1703 aa33.32■■■□□ 2.92
LINC00094-201ENST00000432807 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
LINC00094-201ENST00000432807 SMARCA4P51532 1647 aa33.22■■■□□ 2.91
LINC00094-201ENST00000432807 TOP2AP11388 1531 aaKnown RBP33.15■■■□□ 2.9
LINC00094-201ENST00000432807 EIF4G1Q04637 1599 aaKnown RBP33.15■■■□□ 2.9
LINC00094-201ENST00000432807 EHMT2Q96KQ7 1210 aa33.09■■■□□ 2.89
LINC00094-201ENST00000432807 CCDC88BA6NC98 1476 aa33.02■■■□□ 2.88
LINC00094-201ENST00000432807 PPARGC1BQ86YN6 1023 aaKnown RBP33.01■■■□□ 2.87
LINC00094-201ENST00000432807 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
LINC00094-201ENST00000432807 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
LINC00094-201ENST00000432807 BICRAQ9NZM4 1560 aa32.95■■■□□ 2.87
LINC00094-201ENST00000432807 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
LINC00094-201ENST00000432807 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
LINC00094-201ENST00000432807 SOGA1O94964 1423 aa32.52■■■□□ 2.8
LINC00094-201ENST00000432807 ATAD2BQ9ULI0 1458 aa32.43■■■□□ 2.78
LINC00094-201ENST00000432807 ZEB1P37275 1124 aaPredicted RBP32.43■■■□□ 2.78
LINC00094-201ENST00000432807 RUSC2Q8N2Y8 1516 aa32.36■■■□□ 2.77
LINC00094-201ENST00000432807 EEA1Q15075 1411 aa32.34■■■□□ 2.77
LINC00094-201ENST00000432807 WRNQ14191 1432 aaPredicted RBP eCLIP32.33■■■□□ 2.77
LINC00094-201ENST00000432807 CSRNP3Q8WYN3 585 aa32.33■■■□□ 2.77
LINC00094-201ENST00000432807 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
LINC00094-201ENST00000432807 CEP162Q5TB80 1403 aa32.27■■■□□ 2.76
LINC00094-201ENST00000432807 TNIKQ9UKE5 1360 aa32.26■■■□□ 2.76
LINC00094-201ENST00000432807 SYNJ1O43426 1573 aa32.17■■■□□ 2.74
LINC00094-201ENST00000432807 UBTFP17480 764 aaKnown RBP32.15■■■□□ 2.74
LINC00094-201ENST00000432807 GOLGA3Q08378 1498 aa32.09■■■□□ 2.73
LINC00094-201ENST00000432807 TTBK1Q5TCY1 1321 aaPredicted RBP31.98■■■□□ 2.71
LINC00094-201ENST00000432807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.94■■■□□ 2.7
LINC00094-201ENST00000432807 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
LINC00094-201ENST00000432807 KIF21BO75037 1637 aa31.89■■■□□ 2.7
LINC00094-201ENST00000432807 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
LINC00094-201ENST00000432807 CCER1Q8TC90 406 aaPredicted RBP31.83■■■□□ 2.69
LINC00094-201ENST00000432807 TOP2BQ02880 1626 aa31.81■■■□□ 2.68
LINC00094-201ENST00000432807 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
LINC00094-201ENST00000432807 RAPGEF2Q9Y4G8 1499 aa31.73■■■□□ 2.67
LINC00094-201ENST00000432807 CLIP1P30622 1438 aa31.72■■■□□ 2.67
LINC00094-201ENST00000432807 BIVM-ERCC5R4GMW8 1640 aa31.69■■■□□ 2.66
LINC00094-201ENST00000432807 VPS8Q8N3P4 1428 aa31.56■■■□□ 2.64
LINC00094-201ENST00000432807 CUX1P39880 1505 aa31.54■■■□□ 2.64
LINC00094-201ENST00000432807 CFTRP13569 1480 aa31.54■■■□□ 2.64
LINC00094-201ENST00000432807 RANGAP1P46060 587 aaPredicted RBP31.52■■■□□ 2.64
LINC00094-201ENST00000432807 PRXQ9BXM0 1461 aa31.47■■■□□ 2.63
LINC00094-201ENST00000432807 ERICH3Q5RHP9 1530 aa31.42■■■□□ 2.62
LINC00094-201ENST00000432807 APLP2Q06481 763 aa31.39■■■□□ 2.62
LINC00094-201ENST00000432807 KIF27Q86VH2 1401 aa31.36■■■□□ 2.61
LINC00094-201ENST00000432807 HNRNPUL2Q1KMD3 747 aaKnown RBP31.31■■■□□ 2.6
LINC00094-201ENST00000432807 ARAP1Q96P48 1450 aa31.24■■■□□ 2.59
LINC00094-201ENST00000432807 CADPSQ9ULU8 1353 aa31.22■■■□□ 2.59
LINC00094-201ENST00000432807 PRDM2Q13029 1718 aa31.22■■■□□ 2.59
LINC00094-201ENST00000432807 DIEXFQ68CQ4 756 aaKnown RBP31.11■■■□□ 2.57
LINC00094-201ENST00000432807 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
LINC00094-201ENST00000432807 CUX2O14529 1486 aa31.08■■■□□ 2.57
LINC00094-201ENST00000432807 IGF1RP08069 1367 aa31.05■■■□□ 2.56
LINC00094-201ENST00000432807 KANK4Q5T7N3 995 aaPredicted RBP31.05■■■□□ 2.56
LINC00094-201ENST00000432807 ARHGAP35Q9NRY4 1499 aa31.01■■■□□ 2.55
LINC00094-201ENST00000432807 FGD5Q6ZNL6 1462 aa31■■■□□ 2.55
LINC00094-201ENST00000432807 ZNF316A6NFI3 1004 aaPredicted RBP30.95■■■□□ 2.54
LINC00094-201ENST00000432807 CARMIL1Q5VZK9 1371 aa30.91■■■□□ 2.54
LINC00094-201ENST00000432807 SCAF1Q9H7N4 1312 aaKnown RBP30.9■■■□□ 2.54
LINC00094-201ENST00000432807 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
LINC00094-201ENST00000432807 RRBP1Q9P2E9 1410 aaKnown RBP30.82■■■□□ 2.52
LINC00094-201ENST00000432807 NESP48681 1621 aa30.73■■■□□ 2.51
LINC00094-201ENST00000432807 DNMBPQ6XZF7 1577 aa30.72■■■□□ 2.51
LINC00094-201ENST00000432807 DHX57Q6P158 1386 aaKnown RBP30.71■■■□□ 2.51
LINC00094-201ENST00000432807 RAD54L2Q9Y4B4 1467 aa30.71■■■□□ 2.51
LINC00094-201ENST00000432807 ACIN1Q9UKV3 1341 aaKnown RBP30.71■■■□□ 2.51
LINC00094-201ENST00000432807 CCNB3Q8WWL7 1395 aa30.69■■■□□ 2.5
LINC00094-201ENST00000432807 NEUROD1Q13562 356 aa30.69■■■□□ 2.5
LINC00094-201ENST00000432807 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
LINC00094-201ENST00000432807 CLSPNQ9HAW4 1339 aa30.67■■■□□ 2.5
LINC00094-201ENST00000432807 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
LINC00094-201ENST00000432807 ABCA10Q8WWZ4 1543 aa30.65■■■□□ 2.5
LINC00094-201ENST00000432807 TIAM1Q13009 1591 aa30.62■■■□□ 2.49
LINC00094-201ENST00000432807 MAP3K1Q13233 1512 aa30.61■■■□□ 2.49
LINC00094-201ENST00000432807 P3H3Q8IVL6 736 aa30.56■■■□□ 2.48
LINC00094-201ENST00000432807 CENPBP07199 599 aaPredicted RBP30.55■■■□□ 2.48
LINC00094-201ENST00000432807 ITGAEP38570 1179 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms