RNA–Protein interactions for RNA: ENST00000320330.7

PAGR1-201, Transcript of PAXIP1 associated glutamate rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAGR1, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAGR1-201ENST00000320330 NISCHQ9Y2I1 1504 aa48.41■■■■■ 5.34
PAGR1-201ENST00000320330 CCDC180Q9P1Z9 1646 aa42.56■■■■■ 4.4
PAGR1-201ENST00000320330 ABCC9O60706 1549 aa41.19■■■■■ 4.18
PAGR1-201ENST00000320330 DCAF8L2P0C7V8 631 aa40.5■■■■■ 4.07
PAGR1-201ENST00000320330 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
PAGR1-201ENST00000320330 DCAF1Q9Y4B6 1507 aa39.97■■■■□ 3.99
PAGR1-201ENST00000320330 NACADO15069 1562 aa39.9■■■■□ 3.98
PAGR1-201ENST00000320330 MYO15BQ96JP2 1530 aa39.83■■■■□ 3.97
PAGR1-201ENST00000320330 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
PAGR1-201ENST00000320330 SCRIBQ14160 1630 aa39.1■■■■□ 3.85
PAGR1-201ENST00000320330 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
PAGR1-201ENST00000320330 UNC13AQ9UPW8 1703 aa38.84■■■■□ 3.81
PAGR1-201ENST00000320330 PABPN1Q86U42 306 aaKnown RBP eCLIP38.73■■■■□ 3.79
PAGR1-201ENST00000320330 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
PAGR1-201ENST00000320330 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
PAGR1-201ENST00000320330 EIF4G1Q04637 1599 aaKnown RBP37.52■■■■□ 3.6
PAGR1-201ENST00000320330 BAZ1AQ9NRL2 1556 aaPredicted RBP37.46■■■■□ 3.59
PAGR1-201ENST00000320330 SMARCA4P51532 1647 aa37.38■■■■□ 3.57
PAGR1-201ENST00000320330 MROH2BQ7Z745 1585 aa37.37■■■■□ 3.57
PAGR1-201ENST00000320330 RSF1Q96T23 1441 aaPredicted RBP37.23■■■■□ 3.55
PAGR1-201ENST00000320330 CC2D2AQ9P2K1 1620 aa37.19■■■■□ 3.54
PAGR1-201ENST00000320330 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
PAGR1-201ENST00000320330 SUPT5HO00267 1087 aaKnown RBP37.1■■■■□ 3.53
PAGR1-201ENST00000320330 ATAD2BQ9ULI0 1458 aa37.03■■■■□ 3.52
PAGR1-201ENST00000320330 WIZO95785 1651 aa37■■■■□ 3.51
PAGR1-201ENST00000320330 SMARCA2P51531 1590 aa36.98■■■■□ 3.51
PAGR1-201ENST00000320330 PEG3Q9GZU2 1588 aa36.92■■■■□ 3.5
PAGR1-201ENST00000320330 NCAPD3P42695 1498 aa36.85■■■■□ 3.49
PAGR1-201ENST00000320330 BAZ1BQ9UIG0 1483 aaKnown RBP36.8■■■■□ 3.48
PAGR1-201ENST00000320330 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
PAGR1-201ENST00000320330 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
PAGR1-201ENST00000320330 CCDC88BA6NC98 1476 aa36.25■■■■□ 3.39
PAGR1-201ENST00000320330 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
PAGR1-201ENST00000320330 NESP48681 1621 aa35.86■■■■□ 3.33
PAGR1-201ENST00000320330 CFTRP13569 1480 aa35.79■■■■□ 3.32
PAGR1-201ENST00000320330 LAMC3Q9Y6N6 1575 aa35.73■■■■□ 3.31
PAGR1-201ENST00000320330 PDS5BQ9NTI5 1447 aa35.56■■■■□ 3.28
PAGR1-201ENST00000320330 FANCD2Q9BXW9 1451 aa35.49■■■■□ 3.27
PAGR1-201ENST00000320330 ERCC6Q03468 1493 aa35.45■■■■□ 3.26
PAGR1-201ENST00000320330 PRDM2Q13029 1718 aa35.42■■■■□ 3.26
PAGR1-201ENST00000320330 CEP164Q9UPV0 1460 aa35.36■■■■□ 3.25
PAGR1-201ENST00000320330 KIF21AQ7Z4S6 1674 aa35.34■■■■□ 3.25
PAGR1-201ENST00000320330 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
PAGR1-201ENST00000320330 MRC2Q9UBG0 1479 aa35.12■■■■□ 3.21
PAGR1-201ENST00000320330 WRNQ14191 1432 aaPredicted RBP eCLIP35.1■■■■□ 3.21
PAGR1-201ENST00000320330 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
PAGR1-201ENST00000320330 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
PAGR1-201ENST00000320330 CUX1P39880 1505 aa35■■■■□ 3.19
PAGR1-201ENST00000320330 TOPBP1Q92547 1522 aa34.97■■■■□ 3.19
PAGR1-201ENST00000320330 CHIC1Q5VXU3 224 aa34.96■■■■□ 3.19
PAGR1-201ENST00000320330 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
PAGR1-201ENST00000320330 TRIM41Q8WV44 630 aa34.94■■■■□ 3.18
PAGR1-201ENST00000320330 SYNJ1O43426 1573 aa34.94■■■■□ 3.18
PAGR1-201ENST00000320330 WDR62O43379 1518 aa34.93■■■■□ 3.18
PAGR1-201ENST00000320330 TOP2BQ02880 1626 aa34.85■■■■□ 3.17
PAGR1-201ENST00000320330 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
PAGR1-201ENST00000320330 FGD5Q6ZNL6 1462 aa34.79■■■■□ 3.16
PAGR1-201ENST00000320330 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
PAGR1-201ENST00000320330 SOGA1O94964 1423 aa34.67■■■■□ 3.14
PAGR1-201ENST00000320330 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
PAGR1-201ENST00000320330 CUX2O14529 1486 aa34.64■■■■□ 3.14
PAGR1-201ENST00000320330 IFT140Q96RY7 1462 aa34.55■■■■□ 3.12
PAGR1-201ENST00000320330 TARBP1Q13395 1621 aaKnown RBP34.48■■■■□ 3.11
PAGR1-201ENST00000320330 TDRD9Q8NDG6 1382 aaKnown RBP34.43■■■■□ 3.1
PAGR1-201ENST00000320330 ABCA10Q8WWZ4 1543 aa34.43■■■■□ 3.1
PAGR1-201ENST00000320330 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
PAGR1-201ENST00000320330 AQRO60306 1485 aaKnown RBP eCLIP34.35■■■■□ 3.092e-8■■■■□ 22
PAGR1-201ENST00000320330 FAM9AQ8IZU1 332 aaPredicted RBP34.32■■■■□ 3.08
PAGR1-201ENST00000320330 KIF27Q86VH2 1401 aa34.31■■■■□ 3.08
PAGR1-201ENST00000320330 WDR97A6NE52 1622 aa34.31■■■■□ 3.08
PAGR1-201ENST00000320330 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
PAGR1-201ENST00000320330 GAPVD1Q14C86 1478 aa34.25■■■■□ 3.07
PAGR1-201ENST00000320330 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
PAGR1-201ENST00000320330 ABCA5Q8WWZ7 1642 aa34.18■■■■□ 3.06
PAGR1-201ENST00000320330 GRIN2BQ13224 1484 aa34.11■■■■□ 3.05
PAGR1-201ENST00000320330 EEA1Q15075 1411 aa34.09■■■■□ 3.05
PAGR1-201ENST00000320330 IGF1RP08069 1367 aa34.08■■■■□ 3.05
PAGR1-201ENST00000320330 CSRNP3Q8WYN3 585 aa34.07■■■■□ 3.05
PAGR1-201ENST00000320330 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
PAGR1-201ENST00000320330 ERICH3Q5RHP9 1530 aa34.01■■■■□ 3.04
PAGR1-201ENST00000320330 SNAPC4Q5SXM2 1469 aa34■■■■□ 3.03
PAGR1-201ENST00000320330 FBLN2P98095 1184 aa33.93■■■■□ 3.02
PAGR1-201ENST00000320330 CARMIL1Q5VZK9 1371 aa33.92■■■■□ 3.02
PAGR1-201ENST00000320330 EHMT2Q96KQ7 1210 aa33.91■■■■□ 3.02
PAGR1-201ENST00000320330 MAGI1Q96QZ7 1491 aaPredicted RBP33.91■■■■□ 3.02
PAGR1-201ENST00000320330 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
PAGR1-201ENST00000320330 FHAD1B1AJZ9 1412 aa33.86■■■■□ 3.01
PAGR1-201ENST00000320330 CUL7Q14999 1698 aa33.82■■■■□ 3.01
PAGR1-201ENST00000320330 ADAMTS12P58397 1594 aa33.82■■■■□ 3.01
PAGR1-201ENST00000320330 SYNJ2O15056 1496 aa33.79■■■■□ 3
PAGR1-201ENST00000320330 PRXQ9BXM0 1461 aa33.79■■■■□ 3
PAGR1-201ENST00000320330 RAPGEF2Q9Y4G8 1499 aa33.76■■■□□ 2.99
PAGR1-201ENST00000320330 GRIN2AQ12879 1464 aa33.68■■■□□ 2.98
PAGR1-201ENST00000320330 KIF21BO75037 1637 aa33.65■■■□□ 2.98
PAGR1-201ENST00000320330 LOC105371045A0A1W2PR82 267 aa33.65■■■□□ 2.98
PAGR1-201ENST00000320330 UBTFP17480 764 aaKnown RBP33.62■■■□□ 2.97
PAGR1-201ENST00000320330 CHD1O14646 1710 aa33.62■■■□□ 2.97
PAGR1-201ENST00000320330 GOLGA3Q08378 1498 aa33.61■■■□□ 2.97
PAGR1-201ENST00000320330 OSCARQ8IYS5 282 aa33.51■■■□□ 2.96
PAGR1-201ENST00000320330 CEP170Q5SW79 1584 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms