RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 NISCHQ9Y2I1 1504 aa51.31■■■■■ 5.8
TNFRSF18-201ENST00000328596 CCDC180Q9P1Z9 1646 aa45.72■■■■■ 4.91
TNFRSF18-201ENST00000328596 ABCC9O60706 1549 aa45.01■■■■■ 4.8
TNFRSF18-201ENST00000328596 RB1CC1Q8TDY2 1594 aa43.18■■■■■ 4.5
TNFRSF18-201ENST00000328596 NACADO15069 1562 aa43.07■■■■■ 4.49
TNFRSF18-201ENST00000328596 DCAF8L2P0C7V8 631 aa43■■■■■ 4.47
TNFRSF18-201ENST00000328596 MYO15BQ96JP2 1530 aa42.74■■■■■ 4.43
TNFRSF18-201ENST00000328596 ZCCHC6Q5VYS8 1495 aaKnown RBP42.68■■■■■ 4.42
TNFRSF18-201ENST00000328596 DCAF1Q9Y4B6 1507 aa42.45■■■■■ 4.39
TNFRSF18-201ENST00000328596 UNC13AQ9UPW8 1703 aa42.17■■■■■ 4.34
TNFRSF18-201ENST00000328596 PABPN1Q86U42 306 aaKnown RBP eCLIP42.04■■■■■ 4.32
TNFRSF18-201ENST00000328596 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.29
TNFRSF18-201ENST00000328596 SCRIBQ14160 1630 aa41.69■■■■■ 4.27
TNFRSF18-201ENST00000328596 DNAJC5BQ9UF47 199 aa41.59■■■■■ 4.25
TNFRSF18-201ENST00000328596 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
TNFRSF18-201ENST00000328596 EIF4G1Q04637 1599 aaKnown RBP40.8■■■■■ 4.12
TNFRSF18-201ENST00000328596 CC2D2AQ9P2K1 1620 aa40.71■■■■■ 4.11
TNFRSF18-201ENST00000328596 CECR2Q9BXF3 1484 aa40.49■■■■■ 4.07
TNFRSF18-201ENST00000328596 SMARCA4P51532 1647 aa39.86■■■■□ 3.97
TNFRSF18-201ENST00000328596 BAZ1AQ9NRL2 1556 aaPredicted RBP39.79■■■■□ 3.96
TNFRSF18-201ENST00000328596 NCAPD3P42695 1498 aa39.76■■■■□ 3.96
TNFRSF18-201ENST00000328596 ATAD2BQ9ULI0 1458 aa39.74■■■■□ 3.95
TNFRSF18-201ENST00000328596 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
TNFRSF18-201ENST00000328596 MROH2BQ7Z745 1585 aa39.53■■■■□ 3.92
TNFRSF18-201ENST00000328596 HMGXB3Q12766 1538 aa39.52■■■■□ 3.92
TNFRSF18-201ENST00000328596 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
TNFRSF18-201ENST00000328596 BAZ1BQ9UIG0 1483 aaKnown RBP39.39■■■■□ 3.9
TNFRSF18-201ENST00000328596 WIZO95785 1651 aa39.09■■■■□ 3.85
TNFRSF18-201ENST00000328596 RSF1Q96T23 1441 aaPredicted RBP38.99■■■■□ 3.83
TNFRSF18-201ENST00000328596 NESP48681 1621 aa38.87■■■■□ 3.81
TNFRSF18-201ENST00000328596 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
TNFRSF18-201ENST00000328596 LAMC3Q9Y6N6 1575 aa38.74■■■■□ 3.79
TNFRSF18-201ENST00000328596 TOP2AP11388 1531 aaKnown RBP38.66■■■■□ 3.78
TNFRSF18-201ENST00000328596 CADPSQ9ULU8 1353 aa38.59■■■■□ 3.77
TNFRSF18-201ENST00000328596 CUX2O14529 1486 aa38.53■■■■□ 3.76
TNFRSF18-201ENST00000328596 PDS5BQ9NTI5 1447 aa38.51■■■■□ 3.76
TNFRSF18-201ENST00000328596 KIF21AQ7Z4S6 1674 aa38.38■■■■□ 3.73
TNFRSF18-201ENST00000328596 THOC2Q8NI27 1593 aaKnown RBP38.33■■■■□ 3.73
TNFRSF18-201ENST00000328596 CFTRP13569 1480 aa38.29■■■■□ 3.72
TNFRSF18-201ENST00000328596 CCDC88BA6NC98 1476 aa38.22■■■■□ 3.71
TNFRSF18-201ENST00000328596 FANCD2Q9BXW9 1451 aa38.14■■■■□ 3.7
TNFRSF18-201ENST00000328596 MRC2Q9UBG0 1479 aa38.11■■■■□ 3.69
TNFRSF18-201ENST00000328596 CEP164Q9UPV0 1460 aa38.11■■■■□ 3.69
TNFRSF18-201ENST00000328596 WDR62O43379 1518 aa37.99■■■■□ 3.67
TNFRSF18-201ENST00000328596 PRDM2Q13029 1718 aa37.94■■■■□ 3.66
TNFRSF18-201ENST00000328596 SUPT5HO00267 1087 aaKnown RBP37.81■■■■□ 3.64
TNFRSF18-201ENST00000328596 URB2Q14146 1524 aaKnown RBP37.77■■■■□ 3.64
TNFRSF18-201ENST00000328596 DNAJC5Q9H3Z4 198 aa37.68■■■■□ 3.62
TNFRSF18-201ENST00000328596 TOPBP1Q92547 1522 aa37.5■■■■□ 3.59
TNFRSF18-201ENST00000328596 ABCC8Q09428 1581 aa37.48■■■■□ 3.59
TNFRSF18-201ENST00000328596 DNMBPQ6XZF7 1577 aa37.42■■■■□ 3.58
TNFRSF18-201ENST00000328596 IFT140Q96RY7 1462 aa37.33■■■■□ 3.57
TNFRSF18-201ENST00000328596 ZNF608Q9ULD9 1512 aaPredicted RBP37.18■■■■□ 3.54
TNFRSF18-201ENST00000328596 POLA1P09884 1462 aaPredicted RBP37.15■■■■□ 3.54
TNFRSF18-201ENST00000328596 CUX1P39880 1505 aa37.1■■■■□ 3.53
TNFRSF18-201ENST00000328596 TARBP1Q13395 1621 aaKnown RBP37.09■■■■□ 3.53
TNFRSF18-201ENST00000328596 FGD5Q6ZNL6 1462 aa37.02■■■■□ 3.52
TNFRSF18-201ENST00000328596 SOGA1O94964 1423 aa37.02■■■■□ 3.52
TNFRSF18-201ENST00000328596 RAD54L2Q9Y4B4 1467 aa37.01■■■■□ 3.51
TNFRSF18-201ENST00000328596 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
TNFRSF18-201ENST00000328596 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.5
TNFRSF18-201ENST00000328596 OSCARQ8IYS5 282 aa36.9■■■■□ 3.5
TNFRSF18-201ENST00000328596 TDRD9Q8NDG6 1382 aaKnown RBP36.84■■■■□ 3.49
TNFRSF18-201ENST00000328596 WDR97A6NE52 1622 aa36.79■■■■□ 3.48
TNFRSF18-201ENST00000328596 WRNQ14191 1432 aaPredicted RBP eCLIP36.78■■■■□ 3.48
TNFRSF18-201ENST00000328596 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
TNFRSF18-201ENST00000328596 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
TNFRSF18-201ENST00000328596 SYNJ1O43426 1573 aa36.68■■■■□ 3.46
TNFRSF18-201ENST00000328596 ABCA10Q8WWZ4 1543 aa36.66■■■■□ 3.46
TNFRSF18-201ENST00000328596 GRIN2BQ13224 1484 aa36.61■■■■□ 3.45
TNFRSF18-201ENST00000328596 SNAPC4Q5SXM2 1469 aa36.59■■■■□ 3.45
TNFRSF18-201ENST00000328596 CHD1O14646 1710 aa36.58■■■■□ 3.45
TNFRSF18-201ENST00000328596 GAPVD1Q14C86 1478 aa36.57■■■■□ 3.45
TNFRSF18-201ENST00000328596 FBLN2P98095 1184 aa36.56■■■■□ 3.44
TNFRSF18-201ENST00000328596 MAGI1Q96QZ7 1491 aaPredicted RBP36.54■■■■□ 3.44
TNFRSF18-201ENST00000328596 ABCA5Q8WWZ7 1642 aa36.52■■■■□ 3.44
TNFRSF18-201ENST00000328596 PBRM1Q86U86 1689 aa36.48■■■■□ 3.43
TNFRSF18-201ENST00000328596 CHMP7Q8WUX9 453 aaPredicted RBP36.43■■■■□ 3.42
TNFRSF18-201ENST00000328596 SYNJ2O15056 1496 aa36.4■■■■□ 3.42
TNFRSF18-201ENST00000328596 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
TNFRSF18-201ENST00000328596 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
TNFRSF18-201ENST00000328596 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
TNFRSF18-201ENST00000328596 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
TNFRSF18-201ENST00000328596 ARHGEF11O15085 1522 aa36.28■■■■□ 3.4
TNFRSF18-201ENST00000328596 ERICH3Q5RHP9 1530 aa36.22■■■■□ 3.39
TNFRSF18-201ENST00000328596 CLASP1Q7Z460 1538 aa36.2■■■■□ 3.39
TNFRSF18-201ENST00000328596 ADAMTS12P58397 1594 aa36.19■■■■□ 3.38
TNFRSF18-201ENST00000328596 FHAD1B1AJZ9 1412 aa36.15■■■■□ 3.38
TNFRSF18-201ENST00000328596 GRIN2AQ12879 1464 aa36.13■■■■□ 3.37
TNFRSF18-201ENST00000328596 KIF27Q86VH2 1401 aa36.04■■■■□ 3.36
TNFRSF18-201ENST00000328596 NUP160Q12769 1436 aa35.99■■■■□ 3.35
TNFRSF18-201ENST00000328596 CYB5RLQ6IPT4 315 aa35.98■■■■□ 3.35
TNFRSF18-201ENST00000328596 ARAP1Q96P48 1450 aa35.97■■■■□ 3.35
TNFRSF18-201ENST00000328596 CEP170Q5SW79 1584 aa35.95■■■■□ 3.35
TNFRSF18-201ENST00000328596 IGF1RP08069 1367 aa35.93■■■■□ 3.34
TNFRSF18-201ENST00000328596 CUL7Q14999 1698 aa35.82■■■■□ 3.33
TNFRSF18-201ENST00000328596 SHROOM2Q13796 1616 aa35.73■■■■□ 3.31
TNFRSF18-201ENST00000328596 CARMIL1Q5VZK9 1371 aa35.71■■■■□ 3.31
TNFRSF18-201ENST00000328596 ERCC6L2Q5T890 1561 aa35.68■■■■□ 3.3
TNFRSF18-201ENST00000328596 RUSC2Q8N2Y8 1516 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms