RNA–Protein interactions for RNA: ENST00000360105.8

NFIX-202, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 5,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-202ENST00000360105 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
NFIX-202ENST00000360105 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
NFIX-202ENST00000360105 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.7
NFIX-202ENST00000360105 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
NFIX-202ENST00000360105 FAM9AQ8IZU1 332 aaPredicted RBP31.25■■■□□ 2.59
NFIX-202ENST00000360105 APLP2Q06481 763 aa31.04■■■□□ 2.56
NFIX-202ENST00000360105 EHMT2Q96KQ7 1210 aa30.99■■■□□ 2.55
NFIX-202ENST00000360105 PELP1Q8IZL8 1130 aaKnown RBP30.47■■■□□ 2.47
NFIX-202ENST00000360105 ATP1B4Q9UN42 357 aaPredicted RBP29.98■■■□□ 2.39
NFIX-202ENST00000360105 RANGAP1P46060 587 aaPredicted RBP29.95■■■□□ 2.38
NFIX-202ENST00000360105 TTBK1Q5TCY1 1321 aaPredicted RBP29.9■■■□□ 2.38
NFIX-202ENST00000360105 TRIM41Q8WV44 630 aa29.76■■■□□ 2.36
NFIX-202ENST00000360105 UBTFP17480 764 aaKnown RBP29.6■■■□□ 2.33
NFIX-202ENST00000360105 PCGF6Q9BYE7 350 aa29.45■■■□□ 2.3
NFIX-202ENST00000360105 MYT1LQ9UL68 1186 aa29.28■■■□□ 2.28
NFIX-202ENST00000360105 CCER1Q8TC90 406 aaPredicted RBP29.24■■■□□ 2.27
NFIX-202ENST00000360105 ZEB1P37275 1124 aaPredicted RBP29.2■■■□□ 2.27
NFIX-202ENST00000360105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
NFIX-202ENST00000360105 HNRNPUL2Q1KMD3 747 aaKnown RBP29.12■■■□□ 2.25
NFIX-202ENST00000360105 ERICH6Q7L0X2 663 aa29.05■■■□□ 2.24
NFIX-202ENST00000360105 CENPBP07199 599 aaPredicted RBP29.03■■■□□ 2.24
NFIX-202ENST00000360105 NEFLP07196 543 aa28.8■■■□□ 2.2
NFIX-202ENST00000360105 ITGAEP38570 1179 aa28.54■■■□□ 2.16
NFIX-202ENST00000360105 POLR3GLQ9BT43 218 aa28.49■■■□□ 2.15
NFIX-202ENST00000360105 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
NFIX-202ENST00000360105 PPARGC1BQ86YN6 1023 aaKnown RBP28.44■■■□□ 2.14
NFIX-202ENST00000360105 ABCC9O60706 1549 aa28.37■■■□□ 2.13
NFIX-202ENST00000360105 SLC4A1APQ9BWU0 796 aaKnown RBP28.3■■■□□ 2.12
NFIX-202ENST00000360105 YTHDC1Q96MU7 727 aaKnown RBP28.29■■■□□ 2.12
NFIX-202ENST00000360105 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
NFIX-202ENST00000360105 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
NFIX-202ENST00000360105 DAXXQ9UER7 740 aaPredicted RBP28.13■■■□□ 2.09
NFIX-202ENST00000360105 FBLN2P98095 1184 aa28.03■■■□□ 2.08
NFIX-202ENST00000360105 CNGB1Q14028 1251 aaPredicted RBP27.95■■■□□ 2.07
NFIX-202ENST00000360105 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.07
NFIX-202ENST00000360105 TRIM52Q96A61 297 aa27.91■■■□□ 2.06
NFIX-202ENST00000360105 LOC105371045A0A1W2PR82 267 aa27.75■■■□□ 2.03
NFIX-202ENST00000360105 BCANQ96GW7 911 aa27.67■■■□□ 2.02
NFIX-202ENST00000360105 CLSPNQ9HAW4 1339 aa27.6■■■□□ 2.01
NFIX-202ENST00000360105 ESF1Q9H501 851 aaKnown RBP27.56■■■□□ 2
NFIX-202ENST00000360105 HRCP23327 699 aa27.51■■□□□ 1.99
NFIX-202ENST00000360105 ZNF326Q5BKZ1 582 aaKnown RBP27.5■■□□□ 1.99
NFIX-202ENST00000360105 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
NFIX-202ENST00000360105 ZBTB47Q9UFB7 747 aaPredicted RBP27.45■■□□□ 1.98
NFIX-202ENST00000360105 CDK11AQ9UQ88 783 aaPredicted RBP27.43■■□□□ 1.98
NFIX-202ENST00000360105 NPM1P06748 294 aaKnown RBP eCLIP27.42■■□□□ 1.98
NFIX-202ENST00000360105 NEFMP07197 916 aa27.41■■□□□ 1.98
NFIX-202ENST00000360105 ZNF316A6NFI3 1004 aaPredicted RBP27.4■■□□□ 1.98
NFIX-202ENST00000360105 SLC24A1O60721 1099 aa27.37■■□□□ 1.97
NFIX-202ENST00000360105 ARID3CA6NKF2 412 aa27.3■■□□□ 1.96
NFIX-202ENST00000360105 ZNF777Q9ULD5 760 aaPredicted RBP27.28■■□□□ 1.96
NFIX-202ENST00000360105 P3H3Q8IVL6 736 aa27.26■■□□□ 1.95
NFIX-202ENST00000360105 STAG3Q9UJ98 1225 aa27.22■■□□□ 1.95
NFIX-202ENST00000360105 MYT1Q01538 1121 aa27.18■■□□□ 1.94
NFIX-202ENST00000360105 ANP32CO43423 234 aa27.16■■□□□ 1.94
NFIX-202ENST00000360105 CANXP27824 592 aaKnown RBP27.12■■□□□ 1.93
NFIX-202ENST00000360105 DIEXFQ68CQ4 756 aaKnown RBP27.08■■□□□ 1.93
NFIX-202ENST00000360105 CSRNP3Q8WYN3 585 aa27.07■■□□□ 1.92
NFIX-202ENST00000360105 RTL5Q5HYW3 569 aaPredicted RBP27.06■■□□□ 1.92
NFIX-202ENST00000360105 PLPPR3Q6T4P5 718 aa27.06■■□□□ 1.92
NFIX-202ENST00000360105 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
NFIX-202ENST00000360105 CHGAP10645 457 aaKnown RBP27.02■■□□□ 1.92
NFIX-202ENST00000360105 BCL11AQ9H165 835 aa26.83■■□□□ 1.89
NFIX-202ENST00000360105 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
NFIX-202ENST00000360105 TSPY4P0CV99 314 aa26.66■■□□□ 1.86
NFIX-202ENST00000360105 TSPY10P0CW01 314 aa26.66■■□□□ 1.86
NFIX-202ENST00000360105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.861e-8■■■■■ 27.4
NFIX-202ENST00000360105 TONSLQ96HA7 1378 aa26.64■■□□□ 1.85
NFIX-202ENST00000360105 SCAF1Q9H7N4 1312 aaKnown RBP26.58■■□□□ 1.85
NFIX-202ENST00000360105 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
NFIX-202ENST00000360105 PPP1R15AO75807 674 aaPredicted RBP26.46■■□□□ 1.83
NFIX-202ENST00000360105 MTUS2Q5JR59 1369 aa26.45■■□□□ 1.83
NFIX-202ENST00000360105 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
NFIX-202ENST00000360105 NPM2Q86SE8 214 aaKnown RBP26.43■■□□□ 1.82
NFIX-202ENST00000360105 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
NFIX-202ENST00000360105 A0A0G2JS52 829 aa26.4■■□□□ 1.82
NFIX-202ENST00000360105 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
NFIX-202ENST00000360105 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
NFIX-202ENST00000360105 ARID4BQ4LE39 1312 aaPredicted RBP26.37■■□□□ 1.81
NFIX-202ENST00000360105 KCNH8Q96L42 1107 aa26.36■■□□□ 1.81
NFIX-202ENST00000360105 PLEKHD1A6NEE1 506 aa26.35■■□□□ 1.81
NFIX-202ENST00000360105 WDR43Q15061 677 aaKnown RBP eCLIP26.28■■□□□ 1.8
NFIX-202ENST00000360105 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
NFIX-202ENST00000360105 HAP1P54257 671 aaPredicted RBP26.27■■□□□ 1.8
NFIX-202ENST00000360105 ZBTB7CA1YPR0 619 aa26.27■■□□□ 1.8
NFIX-202ENST00000360105 ANP32AP39687 249 aaKnown RBP26.26■■□□□ 1.79
NFIX-202ENST00000360105 KDM2AQ9Y2K7 1162 aa26.26■■□□□ 1.79
NFIX-202ENST00000360105 UPF2Q9HAU5 1272 aaKnown RBP26.25■■□□□ 1.79
NFIX-202ENST00000360105 HSP90AA1P07900 732 aaKnown RBP26.25■■□□□ 1.79
NFIX-202ENST00000360105 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
NFIX-202ENST00000360105 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.23■■□□□ 1.79
NFIX-202ENST00000360105 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
NFIX-202ENST00000360105 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
NFIX-202ENST00000360105 FAM9BQ8IZU0 186 aa26.12■■□□□ 1.77
NFIX-202ENST00000360105 ANP32BQ92688 251 aaKnown RBP26.11■■□□□ 1.77
NFIX-202ENST00000360105 PLEKHG5O94827 1062 aa26.11■■□□□ 1.77
NFIX-202ENST00000360105 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
NFIX-202ENST00000360105 GTF3C3Q9Y5Q9 886 aa26.1■■□□□ 1.77
NFIX-202ENST00000360105 MYH16Q9H6N6 1097 aa26.09■■□□□ 1.77
NFIX-202ENST00000360105 HNRNPUQ00839 825 aaKnown RBP eCLIP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms