RNA–Protein interactions for RNA: ENST00000382512.3

HTRA3-202, Transcript of HtrA serine peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene HTRA3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3-202ENST00000382512 NISCHQ9Y2I1 1504 aa44.55■■■■■ 4.72
HTRA3-202ENST00000382512 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
HTRA3-202ENST00000382512 ZCCHC6Q5VYS8 1495 aaKnown RBP37.49■■■■□ 3.59
HTRA3-202ENST00000382512 ABCC9O60706 1549 aa36.96■■■■□ 3.51
HTRA3-202ENST00000382512 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
HTRA3-202ENST00000382512 SHROOM4Q9ULL8 1493 aa36.8■■■■□ 3.48
HTRA3-202ENST00000382512 DCAF1Q9Y4B6 1507 aa36.72■■■■□ 3.47
HTRA3-202ENST00000382512 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.37
HTRA3-202ENST00000382512 NACADO15069 1562 aa35.99■■■■□ 3.35
HTRA3-202ENST00000382512 SUPT5HO00267 1087 aaKnown RBP35.93■■■■□ 3.34
HTRA3-202ENST00000382512 RB1CC1Q8TDY2 1594 aa35.79■■■■□ 3.32
HTRA3-202ENST00000382512 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
HTRA3-202ENST00000382512 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
HTRA3-202ENST00000382512 CHIC1Q5VXU3 224 aa35.05■■■■□ 3.2
HTRA3-202ENST00000382512 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
HTRA3-202ENST00000382512 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
HTRA3-202ENST00000382512 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
HTRA3-202ENST00000382512 CECR2Q9BXF3 1484 aa34.7■■■■□ 3.14
HTRA3-202ENST00000382512 MROH2BQ7Z745 1585 aa34.51■■■■□ 3.11
HTRA3-202ENST00000382512 BAZ1AQ9NRL2 1556 aaPredicted RBP34.35■■■■□ 3.09
HTRA3-202ENST00000382512 WIZO95785 1651 aa34.26■■■■□ 3.07
HTRA3-202ENST00000382512 SMARCA4P51532 1647 aa34.2■■■■□ 3.07
HTRA3-202ENST00000382512 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3
HTRA3-202ENST00000382512 LOC105371045A0A1W2PR82 267 aa33.79■■■■□ 3
HTRA3-202ENST00000382512 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
HTRA3-202ENST00000382512 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
HTRA3-202ENST00000382512 HRCP23327 699 aa33.69■■■□□ 2.98
HTRA3-202ENST00000382512 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
HTRA3-202ENST00000382512 PCGF6Q9BYE7 350 aa33.6■■■□□ 2.97
HTRA3-202ENST00000382512 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
HTRA3-202ENST00000382512 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
HTRA3-202ENST00000382512 CCDC88BA6NC98 1476 aa33.54■■■□□ 2.96
HTRA3-202ENST00000382512 BAZ1BQ9UIG0 1483 aaKnown RBP33.41■■■□□ 2.94
HTRA3-202ENST00000382512 CC2D2AQ9P2K1 1620 aa33.38■■■□□ 2.93
HTRA3-202ENST00000382512 NCAPD3P42695 1498 aa33.26■■■□□ 2.91
HTRA3-202ENST00000382512 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
HTRA3-202ENST00000382512 HMGXB3Q12766 1538 aa33.16■■■□□ 2.9
HTRA3-202ENST00000382512 FAM9AQ8IZU1 332 aaPredicted RBP33.12■■■□□ 2.89
HTRA3-202ENST00000382512 ABCC8Q09428 1581 aa33.01■■■□□ 2.88
HTRA3-202ENST00000382512 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
HTRA3-202ENST00000382512 PPARGC1BQ86YN6 1023 aaKnown RBP32.71■■■□□ 2.83
HTRA3-202ENST00000382512 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
HTRA3-202ENST00000382512 EHMT2Q96KQ7 1210 aa32.63■■■□□ 2.81
HTRA3-202ENST00000382512 EEA1Q15075 1411 aa32.6■■■□□ 2.81
HTRA3-202ENST00000382512 ZEB1P37275 1124 aaPredicted RBP32.58■■■□□ 2.81
HTRA3-202ENST00000382512 SYNJ1O43426 1573 aa32.57■■■□□ 2.8
HTRA3-202ENST00000382512 CFTRP13569 1480 aa32.54■■■□□ 2.8
HTRA3-202ENST00000382512 SOGA1O94964 1423 aa32.45■■■□□ 2.79
HTRA3-202ENST00000382512 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
HTRA3-202ENST00000382512 TNIKQ9UKE5 1360 aa32.37■■■□□ 2.77
HTRA3-202ENST00000382512 NESP48681 1621 aa32.37■■■□□ 2.77
HTRA3-202ENST00000382512 PRDM2Q13029 1718 aa32.36■■■□□ 2.77
HTRA3-202ENST00000382512 TOP2BQ02880 1626 aa32.33■■■□□ 2.77
HTRA3-202ENST00000382512 RUSC2Q8N2Y8 1516 aa32.33■■■□□ 2.77
HTRA3-202ENST00000382512 CEP162Q5TB80 1403 aa32.31■■■□□ 2.76
HTRA3-202ENST00000382512 CSRNP3Q8WYN3 585 aa32.31■■■□□ 2.76
HTRA3-202ENST00000382512 BIVM-ERCC5R4GMW8 1640 aa32.28■■■□□ 2.76
HTRA3-202ENST00000382512 GOLGA3Q08378 1498 aa32.24■■■□□ 2.75
HTRA3-202ENST00000382512 CUX1P39880 1505 aa32.23■■■□□ 2.75
HTRA3-202ENST00000382512 LAMC3Q9Y6N6 1575 aa32.16■■■□□ 2.74
HTRA3-202ENST00000382512 KIF21BO75037 1637 aa32.16■■■□□ 2.74
HTRA3-202ENST00000382512 FANCD2Q9BXW9 1451 aa32.09■■■□□ 2.73
HTRA3-202ENST00000382512 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
HTRA3-202ENST00000382512 UBTFP17480 764 aaKnown RBP32.03■■■□□ 2.72
HTRA3-202ENST00000382512 PDS5BQ9NTI5 1447 aa31.95■■■□□ 2.7
HTRA3-202ENST00000382512 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
HTRA3-202ENST00000382512 FGD5Q6ZNL6 1462 aa31.83■■■□□ 2.69
HTRA3-202ENST00000382512 DNMBPQ6XZF7 1577 aa31.78■■■□□ 2.68
HTRA3-202ENST00000382512 KIF27Q86VH2 1401 aa31.78■■■□□ 2.68
HTRA3-202ENST00000382512 CLIP1P30622 1438 aa31.76■■■□□ 2.68
HTRA3-202ENST00000382512 RAPGEF2Q9Y4G8 1499 aa31.75■■■□□ 2.67
HTRA3-202ENST00000382512 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
HTRA3-202ENST00000382512 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
HTRA3-202ENST00000382512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.73■■■□□ 2.67
HTRA3-202ENST00000382512 CCER1Q8TC90 406 aaPredicted RBP31.73■■■□□ 2.67
HTRA3-202ENST00000382512 CUX2O14529 1486 aa31.7■■■□□ 2.66
HTRA3-202ENST00000382512 ERICH3Q5RHP9 1530 aa31.68■■■□□ 2.66
HTRA3-202ENST00000382512 VPS8Q8N3P4 1428 aa31.67■■■□□ 2.66
HTRA3-202ENST00000382512 ERCC6Q03468 1493 aa31.67■■■□□ 2.66
HTRA3-202ENST00000382512 PRXQ9BXM0 1461 aa31.65■■■□□ 2.66
HTRA3-202ENST00000382512 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
HTRA3-202ENST00000382512 TTBK1Q5TCY1 1321 aaPredicted RBP31.6■■■□□ 2.65
HTRA3-202ENST00000382512 MRC2Q9UBG0 1479 aa31.59■■■□□ 2.65
HTRA3-202ENST00000382512 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
HTRA3-202ENST00000382512 IGF1RP08069 1367 aa31.5■■■□□ 2.63
HTRA3-202ENST00000382512 ABCA10Q8WWZ4 1543 aa31.5■■■□□ 2.63
HTRA3-202ENST00000382512 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
HTRA3-202ENST00000382512 WDR62O43379 1518 aa31.42■■■□□ 2.62
HTRA3-202ENST00000382512 RANGAP1P46060 587 aaPredicted RBP31.39■■■□□ 2.62
HTRA3-202ENST00000382512 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
HTRA3-202ENST00000382512 APLP2Q06481 763 aa31.37■■■□□ 2.61
HTRA3-202ENST00000382512 CARMIL1Q5VZK9 1371 aa31.35■■■□□ 2.61
HTRA3-202ENST00000382512 ARAP1Q96P48 1450 aa31.31■■■□□ 2.6
HTRA3-202ENST00000382512 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
HTRA3-202ENST00000382512 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
HTRA3-202ENST00000382512 ABCA5Q8WWZ7 1642 aa31.23■■■□□ 2.59
HTRA3-202ENST00000382512 CUL7Q14999 1698 aa31.17■■■□□ 2.58
HTRA3-202ENST00000382512 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
HTRA3-202ENST00000382512 IFT140Q96RY7 1462 aa31.13■■■□□ 2.57
HTRA3-202ENST00000382512 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms