Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 AC105265.2-201ENST00000467189 838 ntBASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 EEF1DP3-203ENST00000566025 782 ntBASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 AL354811.1-201ENST00000610286 706 ntBASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 IRS3P-201ENST00000223076 1006 ntBASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 AC012414.1-201ENST00000556676 535 ntBASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 AL358852.1-201ENST00000623174 1268 ntBASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM116Q8NCL8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM116Q8NCL8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 AC073314.1-201ENST00000568729 2216 ntBASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM116Q8NCL8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 AC007225.1-201ENST00000566331 1836 ntBASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM116Q8NCL8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 AP004607.4-201ENST00000530158 1459 ntBASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms