RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 NISCHQ9Y2I1 1504 aa43.51■■■■■ 4.56
TUBGCP3-204ENST00000464139 CCDC180Q9P1Z9 1646 aa37.23■■■■□ 3.55
TUBGCP3-204ENST00000464139 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
TUBGCP3-204ENST00000464139 ZCCHC6Q5VYS8 1495 aaKnown RBP36.72■■■■□ 3.47
TUBGCP3-204ENST00000464139 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
TUBGCP3-204ENST00000464139 SUPT5HO00267 1087 aaKnown RBP35.81■■■■□ 3.32
TUBGCP3-204ENST00000464139 DCAF1Q9Y4B6 1507 aa35.73■■■■□ 3.31
TUBGCP3-204ENST00000464139 MYO15BQ96JP2 1530 aa34.86■■■■□ 3.17
TUBGCP3-204ENST00000464139 ABCC9O60706 1549 aa34.81■■■■□ 3.16
TUBGCP3-204ENST00000464139 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
TUBGCP3-204ENST00000464139 CHIC1Q5VXU3 224 aa34.63■■■■□ 3.13
TUBGCP3-204ENST00000464139 NACADO15069 1562 aa34.52■■■■□ 3.12
TUBGCP3-204ENST00000464139 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
TUBGCP3-204ENST00000464139 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
TUBGCP3-204ENST00000464139 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
TUBGCP3-204ENST00000464139 MROH2BQ7Z745 1585 aa33.8■■■■□ 3
TUBGCP3-204ENST00000464139 WIZO95785 1651 aa33.6■■■□□ 2.97
TUBGCP3-204ENST00000464139 LOC105371045A0A1W2PR82 267 aa33.57■■■□□ 2.96
TUBGCP3-204ENST00000464139 UNC13AQ9UPW8 1703 aa33.54■■■□□ 2.96
TUBGCP3-204ENST00000464139 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
TUBGCP3-204ENST00000464139 TRIM41Q8WV44 630 aa33.41■■■□□ 2.94
TUBGCP3-204ENST00000464139 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
TUBGCP3-204ENST00000464139 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.9
TUBGCP3-204ENST00000464139 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
TUBGCP3-204ENST00000464139 FAM9AQ8IZU1 332 aaPredicted RBP33.1■■■□□ 2.89
TUBGCP3-204ENST00000464139 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.89
TUBGCP3-204ENST00000464139 PCGF6Q9BYE7 350 aa33.07■■■□□ 2.88
TUBGCP3-204ENST00000464139 EIF4G1Q04637 1599 aaKnown RBP32.95■■■□□ 2.87
TUBGCP3-204ENST00000464139 CCDC88BA6NC98 1476 aa32.92■■■□□ 2.86
TUBGCP3-204ENST00000464139 SMARCA2P51531 1590 aa32.88■■■□□ 2.85
TUBGCP3-204ENST00000464139 EHMT2Q96KQ7 1210 aa32.81■■■□□ 2.84
TUBGCP3-204ENST00000464139 HRCP23327 699 aa32.76■■■□□ 2.84
TUBGCP3-204ENST00000464139 ABCC8Q09428 1581 aa32.68■■■□□ 2.82
TUBGCP3-204ENST00000464139 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
TUBGCP3-204ENST00000464139 TRIM26Q12899 539 aaPredicted RBP32.57■■■□□ 2.8
TUBGCP3-204ENST00000464139 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
TUBGCP3-204ENST00000464139 BAZ1BQ9UIG0 1483 aaKnown RBP32.37■■■□□ 2.77
TUBGCP3-204ENST00000464139 SOGA1O94964 1423 aa32.28■■■□□ 2.76
TUBGCP3-204ENST00000464139 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.74
TUBGCP3-204ENST00000464139 PPARGC1BQ86YN6 1023 aaKnown RBP32.16■■■□□ 2.74
TUBGCP3-204ENST00000464139 RUSC2Q8N2Y8 1516 aa32.15■■■□□ 2.74
TUBGCP3-204ENST00000464139 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
TUBGCP3-204ENST00000464139 EEA1Q15075 1411 aa32.06■■■□□ 2.72
TUBGCP3-204ENST00000464139 SYNJ1O43426 1573 aa32.06■■■□□ 2.72
TUBGCP3-204ENST00000464139 NCAPD3P42695 1498 aa31.94■■■□□ 2.7
TUBGCP3-204ENST00000464139 CEP162Q5TB80 1403 aa31.92■■■□□ 2.7
TUBGCP3-204ENST00000464139 TNIKQ9UKE5 1360 aa31.91■■■□□ 2.7
TUBGCP3-204ENST00000464139 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
TUBGCP3-204ENST00000464139 UBTFP17480 764 aaKnown RBP31.89■■■□□ 2.7
TUBGCP3-204ENST00000464139 GOLGA3Q08378 1498 aa31.81■■■□□ 2.68
TUBGCP3-204ENST00000464139 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
TUBGCP3-204ENST00000464139 CEP164Q9UPV0 1460 aa31.68■■■□□ 2.66
TUBGCP3-204ENST00000464139 KIF21BO75037 1637 aa31.65■■■□□ 2.66
TUBGCP3-204ENST00000464139 ZEB1P37275 1124 aaPredicted RBP31.64■■■□□ 2.66
TUBGCP3-204ENST00000464139 TTBK1Q5TCY1 1321 aaPredicted RBP31.63■■■□□ 2.65
TUBGCP3-204ENST00000464139 BIVM-ERCC5R4GMW8 1640 aa31.61■■■□□ 2.65
TUBGCP3-204ENST00000464139 CFTRP13569 1480 aa31.55■■■□□ 2.64
TUBGCP3-204ENST00000464139 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
TUBGCP3-204ENST00000464139 CUX1P39880 1505 aa31.5■■■□□ 2.63
TUBGCP3-204ENST00000464139 CLIP1P30622 1438 aa31.43■■■□□ 2.62
TUBGCP3-204ENST00000464139 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
TUBGCP3-204ENST00000464139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.36■■■□□ 2.61
TUBGCP3-204ENST00000464139 RANGAP1P46060 587 aaPredicted RBP31.35■■■□□ 2.61
TUBGCP3-204ENST00000464139 PRDM2Q13029 1718 aa31.3■■■□□ 2.6
TUBGCP3-204ENST00000464139 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
TUBGCP3-204ENST00000464139 PRXQ9BXM0 1461 aa31.27■■■□□ 2.6
TUBGCP3-204ENST00000464139 CCER1Q8TC90 406 aaPredicted RBP31.24■■■□□ 2.59
TUBGCP3-204ENST00000464139 KIF27Q86VH2 1401 aa31.24■■■□□ 2.59
TUBGCP3-204ENST00000464139 VPS8Q8N3P4 1428 aa31.23■■■□□ 2.59
TUBGCP3-204ENST00000464139 ERICH3Q5RHP9 1530 aa31.22■■■□□ 2.59
TUBGCP3-204ENST00000464139 APLP2Q06481 763 aa31.07■■■□□ 2.56
TUBGCP3-204ENST00000464139 CUX2O14529 1486 aa31.03■■■□□ 2.56
TUBGCP3-204ENST00000464139 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
TUBGCP3-204ENST00000464139 ARAP1Q96P48 1450 aa30.98■■■□□ 2.55
TUBGCP3-204ENST00000464139 FANCD2Q9BXW9 1451 aa30.98■■■□□ 2.55
TUBGCP3-204ENST00000464139 IGF1RP08069 1367 aa30.94■■■□□ 2.54
TUBGCP3-204ENST00000464139 HNRNPUL2Q1KMD3 747 aaKnown RBP30.9■■■□□ 2.54
TUBGCP3-204ENST00000464139 NESP48681 1621 aa30.9■■■□□ 2.54
TUBGCP3-204ENST00000464139 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
TUBGCP3-204ENST00000464139 CARMIL1Q5VZK9 1371 aa30.8■■■□□ 2.52
TUBGCP3-204ENST00000464139 ARHGAP35Q9NRY4 1499 aa30.8■■■□□ 2.52
TUBGCP3-204ENST00000464139 DNMBPQ6XZF7 1577 aa30.77■■■□□ 2.52
TUBGCP3-204ENST00000464139 KANK4Q5T7N3 995 aaPredicted RBP30.75■■■□□ 2.51
TUBGCP3-204ENST00000464139 RAD54L2Q9Y4B4 1467 aa30.74■■■□□ 2.51
TUBGCP3-204ENST00000464139 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
TUBGCP3-204ENST00000464139 POLA1P09884 1462 aaPredicted RBP30.69■■■□□ 2.5
TUBGCP3-204ENST00000464139 LAMC3Q9Y6N6 1575 aa30.64■■■□□ 2.5
TUBGCP3-204ENST00000464139 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
TUBGCP3-204ENST00000464139 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
TUBGCP3-204ENST00000464139 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
TUBGCP3-204ENST00000464139 P3H3Q8IVL6 736 aa30.46■■■□□ 2.47
TUBGCP3-204ENST00000464139 RRBP1Q9P2E9 1410 aaKnown RBP30.43■■■□□ 2.46
TUBGCP3-204ENST00000464139 CUL7Q14999 1698 aa30.4■■■□□ 2.46
TUBGCP3-204ENST00000464139 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
TUBGCP3-204ENST00000464139 TDRD9Q8NDG6 1382 aaKnown RBP30.39■■■□□ 2.46
TUBGCP3-204ENST00000464139 TIAM1Q13009 1591 aa30.38■■■□□ 2.45
TUBGCP3-204ENST00000464139 KIF21AQ7Z4S6 1674 aa30.38■■■□□ 2.45
TUBGCP3-204ENST00000464139 DIEXFQ68CQ4 756 aaKnown RBP30.36■■■□□ 2.45
TUBGCP3-204ENST00000464139 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
TUBGCP3-204ENST00000464139 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms