RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 NISCHQ9Y2I1 1504 aa50.18■■■■■ 5.62
SCN1B-203ENST00000595652 CCDC180Q9P1Z9 1646 aa44.33■■■■■ 4.69
SCN1B-203ENST00000595652 ABCC9O60706 1549 aa42.85■■■■■ 4.45
SCN1B-203ENST00000595652 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
SCN1B-203ENST00000595652 DCAF8L2P0C7V8 631 aa41.8■■■■■ 4.28
SCN1B-203ENST00000595652 NACADO15069 1562 aa41.5■■■■■ 4.23
SCN1B-203ENST00000595652 DCAF1Q9Y4B6 1507 aa41.46■■■■■ 4.23
SCN1B-203ENST00000595652 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
SCN1B-203ENST00000595652 MYO15BQ96JP2 1530 aa41.36■■■■■ 4.21
SCN1B-203ENST00000595652 SCRIBQ14160 1630 aa40.62■■■■■ 4.09
SCN1B-203ENST00000595652 UNC13AQ9UPW8 1703 aa40.6■■■■■ 4.09
SCN1B-203ENST00000595652 SHROOM4Q9ULL8 1493 aa40.2■■■■■ 4.03
SCN1B-203ENST00000595652 BICRAQ9NZM4 1560 aa40.16■■■■■ 4.02
SCN1B-203ENST00000595652 PABPN1Q86U42 306 aaKnown RBP eCLIP40.16■■■■■ 4.02
SCN1B-203ENST00000595652 CECR2Q9BXF3 1484 aa39.07■■■■□ 3.85
SCN1B-203ENST00000595652 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
SCN1B-203ENST00000595652 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
SCN1B-203ENST00000595652 SMARCA4P51532 1647 aa38.84■■■■□ 3.81
SCN1B-203ENST00000595652 CC2D2AQ9P2K1 1620 aa38.76■■■■□ 3.8
SCN1B-203ENST00000595652 MROH2BQ7Z745 1585 aa38.74■■■■□ 3.79
SCN1B-203ENST00000595652 DNAJC5BQ9UF47 199 aa38.7■■■■□ 3.79
SCN1B-203ENST00000595652 RSF1Q96T23 1441 aaPredicted RBP38.48■■■■□ 3.75
SCN1B-203ENST00000595652 ATAD2BQ9ULI0 1458 aa38.43■■■■□ 3.74
SCN1B-203ENST00000595652 SMARCA2P51531 1590 aa38.4■■■■□ 3.74
SCN1B-203ENST00000595652 WIZO95785 1651 aa38.4■■■■□ 3.74
SCN1B-203ENST00000595652 PEG3Q9GZU2 1588 aa38.36■■■■□ 3.73
SCN1B-203ENST00000595652 NCAPD3P42695 1498 aa38.25■■■■□ 3.71
SCN1B-203ENST00000595652 BAZ1BQ9UIG0 1483 aaKnown RBP38.18■■■■□ 3.7
SCN1B-203ENST00000595652 HMGXB3Q12766 1538 aa38.15■■■■□ 3.7
SCN1B-203ENST00000595652 SUPT5HO00267 1087 aaKnown RBP38.12■■■■□ 3.69
SCN1B-203ENST00000595652 TOP2AP11388 1531 aaKnown RBP37.96■■■■□ 3.67
SCN1B-203ENST00000595652 CCDC88BA6NC98 1476 aa37.52■■■■□ 3.6
SCN1B-203ENST00000595652 NESP48681 1621 aa37.27■■■■□ 3.56
SCN1B-203ENST00000595652 CADPSQ9ULU8 1353 aa37.2■■■■□ 3.55
SCN1B-203ENST00000595652 LAMC3Q9Y6N6 1575 aa37.18■■■■□ 3.54
SCN1B-203ENST00000595652 CFTRP13569 1480 aa37.11■■■■□ 3.53
SCN1B-203ENST00000595652 PRDM2Q13029 1718 aa36.99■■■■□ 3.51
SCN1B-203ENST00000595652 PDS5BQ9NTI5 1447 aa36.9■■■■□ 3.5
SCN1B-203ENST00000595652 KIF21AQ7Z4S6 1674 aa36.88■■■■□ 3.49
SCN1B-203ENST00000595652 ERCC6Q03468 1493 aa36.86■■■■□ 3.49
SCN1B-203ENST00000595652 FANCD2Q9BXW9 1451 aa36.82■■■■□ 3.49
SCN1B-203ENST00000595652 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
SCN1B-203ENST00000595652 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
SCN1B-203ENST00000595652 MRC2Q9UBG0 1479 aa36.52■■■■□ 3.44
SCN1B-203ENST00000595652 URB2Q14146 1524 aaKnown RBP36.43■■■■□ 3.42
SCN1B-203ENST00000595652 ABCC8Q09428 1581 aa36.42■■■■□ 3.42
SCN1B-203ENST00000595652 WDR62O43379 1518 aa36.36■■■■□ 3.41
SCN1B-203ENST00000595652 DNMBPQ6XZF7 1577 aa36.32■■■■□ 3.41
SCN1B-203ENST00000595652 TOPBP1Q92547 1522 aa36.32■■■■□ 3.4
SCN1B-203ENST00000595652 CUX1P39880 1505 aa36.29■■■■□ 3.4
SCN1B-203ENST00000595652 WRNQ14191 1432 aaPredicted RBP eCLIP36.28■■■■□ 3.4
SCN1B-203ENST00000595652 SYNJ1O43426 1573 aa36.21■■■■□ 3.39
SCN1B-203ENST00000595652 BIVM-ERCC5R4GMW8 1640 aa36.15■■■■□ 3.38
SCN1B-203ENST00000595652 CUX2O14529 1486 aa36.14■■■■□ 3.38
SCN1B-203ENST00000595652 TOP2BQ02880 1626 aa36.13■■■■□ 3.37
SCN1B-203ENST00000595652 FGD5Q6ZNL6 1462 aa36.07■■■■□ 3.37
SCN1B-203ENST00000595652 POLA1P09884 1462 aaPredicted RBP36.04■■■■□ 3.36
SCN1B-203ENST00000595652 RAD54L2Q9Y4B4 1467 aa35.93■■■■□ 3.34
SCN1B-203ENST00000595652 TRIM41Q8WV44 630 aa35.91■■■■□ 3.34
SCN1B-203ENST00000595652 SOGA1O94964 1423 aa35.91■■■■□ 3.34
SCN1B-203ENST00000595652 CHIC1Q5VXU3 224 aa35.9■■■■□ 3.34
SCN1B-203ENST00000595652 IFT140Q96RY7 1462 aa35.89■■■■□ 3.34
SCN1B-203ENST00000595652 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
SCN1B-203ENST00000595652 WDR97A6NE52 1622 aa35.76■■■■□ 3.32
SCN1B-203ENST00000595652 ZNF608Q9ULD9 1512 aaPredicted RBP35.73■■■■□ 3.31
SCN1B-203ENST00000595652 ABCA10Q8WWZ4 1543 aa35.71■■■■□ 3.31
SCN1B-203ENST00000595652 TDRD9Q8NDG6 1382 aaKnown RBP35.65■■■■□ 3.3
SCN1B-203ENST00000595652 EIF4G3O43432 1585 aaKnown RBP35.63■■■■□ 3.29
SCN1B-203ENST00000595652 AQRO60306 1485 aaKnown RBP eCLIP35.61■■■■□ 3.29
SCN1B-203ENST00000595652 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
SCN1B-203ENST00000595652 GAPVD1Q14C86 1478 aa35.5■■■■□ 3.27
SCN1B-203ENST00000595652 PBRM1Q86U86 1689 aa35.47■■■■□ 3.27
SCN1B-203ENST00000595652 KIF27Q86VH2 1401 aa35.46■■■■□ 3.27
SCN1B-203ENST00000595652 RUSC2Q8N2Y8 1516 aa35.42■■■■□ 3.26
SCN1B-203ENST00000595652 GRIN2BQ13224 1484 aa35.39■■■■□ 3.26
SCN1B-203ENST00000595652 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
SCN1B-203ENST00000595652 ERICH3Q5RHP9 1530 aa35.28■■■■□ 3.24
SCN1B-203ENST00000595652 FAM9AQ8IZU1 332 aaPredicted RBP35.26■■■■□ 3.24
SCN1B-203ENST00000595652 IGF1RP08069 1367 aa35.23■■■■□ 3.23
SCN1B-203ENST00000595652 MAGI1Q96QZ7 1491 aaPredicted RBP35.21■■■■□ 3.23
SCN1B-203ENST00000595652 ADAMTS12P58397 1594 aa35.17■■■■□ 3.22
SCN1B-203ENST00000595652 EEA1Q15075 1411 aa35.17■■■■□ 3.22
SCN1B-203ENST00000595652 CUL7Q14999 1698 aa35.13■■■■□ 3.21
SCN1B-203ENST00000595652 CHD1O14646 1710 aa35.12■■■■□ 3.21
SCN1B-203ENST00000595652 FBLN2P98095 1184 aa35.11■■■■□ 3.21
SCN1B-203ENST00000595652 FHAD1B1AJZ9 1412 aa35.09■■■■□ 3.21
SCN1B-203ENST00000595652 CSRNP3Q8WYN3 585 aa35.08■■■■□ 3.21
SCN1B-203ENST00000595652 SYNJ2O15056 1496 aa35.08■■■■□ 3.21
SCN1B-203ENST00000595652 CARMIL1Q5VZK9 1371 aa35.06■■■■□ 3.2
SCN1B-203ENST00000595652 CHMP7Q8WUX9 453 aaPredicted RBP35.05■■■■□ 3.2
SCN1B-203ENST00000595652 GRIN2AQ12879 1464 aa34.95■■■■□ 3.19
SCN1B-203ENST00000595652 PRXQ9BXM0 1461 aa34.92■■■■□ 3.18
SCN1B-203ENST00000595652 RAPGEF2Q9Y4G8 1499 aa34.91■■■■□ 3.18
SCN1B-203ENST00000595652 EHMT2Q96KQ7 1210 aa34.84■■■■□ 3.17
SCN1B-203ENST00000595652 KIF21BO75037 1637 aa34.82■■■■□ 3.16
SCN1B-203ENST00000595652 OSCARQ8IYS5 282 aa34.79■■■■□ 3.16
SCN1B-203ENST00000595652 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
SCN1B-203ENST00000595652 NUP160Q12769 1436 aa34.73■■■■□ 3.15
SCN1B-203ENST00000595652 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
SCN1B-203ENST00000595652 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms