RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
SH2B3-201ENST00000341259 DCAF8L2P0C7V8 631 aa33.91■■■■□ 3.02
SH2B3-201ENST00000341259 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
SH2B3-201ENST00000341259 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
SH2B3-201ENST00000341259 EHMT2Q96KQ7 1210 aa31.03■■■□□ 2.56
SH2B3-201ENST00000341259 FAM9AQ8IZU1 332 aaPredicted RBP30.45■■■□□ 2.47
SH2B3-201ENST00000341259 APLP2Q06481 763 aa30.31■■■□□ 2.44
SH2B3-201ENST00000341259 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
SH2B3-201ENST00000341259 PCGF6Q9BYE7 350 aa30.06■■■□□ 2.4
SH2B3-201ENST00000341259 TTBK1Q5TCY1 1321 aaPredicted RBP29.97■■■□□ 2.39
SH2B3-201ENST00000341259 RANGAP1P46060 587 aaPredicted RBP29.73■■■□□ 2.35
SH2B3-201ENST00000341259 UBTFP17480 764 aaKnown RBP29.54■■■□□ 2.32
SH2B3-201ENST00000341259 PELP1Q8IZL8 1130 aaKnown RBP29.48■■■□□ 2.31
SH2B3-201ENST00000341259 ZEB1P37275 1124 aaPredicted RBP29.46■■■□□ 2.31
SH2B3-201ENST00000341259 CCER1Q8TC90 406 aaPredicted RBP29.4■■■□□ 2.3
SH2B3-201ENST00000341259 ATP1B4Q9UN42 357 aaPredicted RBP29.35■■■□□ 2.29
SH2B3-201ENST00000341259 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
SH2B3-201ENST00000341259 PPARGC1BQ86YN6 1023 aaKnown RBP29.09■■■□□ 2.25
SH2B3-201ENST00000341259 TRIM26Q12899 539 aaPredicted RBP29■■■□□ 2.23
SH2B3-201ENST00000341259 CENPBP07199 599 aaPredicted RBP28.98■■■□□ 2.23
SH2B3-201ENST00000341259 LOC105371045A0A1W2PR82 267 aa28.97■■■□□ 2.23
SH2B3-201ENST00000341259 ABCC9O60706 1549 aa28.92■■■□□ 2.22
SH2B3-201ENST00000341259 HRCP23327 699 aa28.64■■■□□ 2.18
SH2B3-201ENST00000341259 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.17
SH2B3-201ENST00000341259 YTHDC1Q96MU7 727 aaKnown RBP28.53■■■□□ 2.16
SH2B3-201ENST00000341259 ITGAEP38570 1179 aa28.48■■■□□ 2.15
SH2B3-201ENST00000341259 HNRNPUL2Q1KMD3 747 aaKnown RBP28.4■■■□□ 2.14
SH2B3-201ENST00000341259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
SH2B3-201ENST00000341259 NEFLP07196 543 aa28.26■■■□□ 2.12
SH2B3-201ENST00000341259 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
SH2B3-201ENST00000341259 ERICH6Q7L0X2 663 aa28.21■■■□□ 2.11
SH2B3-201ENST00000341259 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
SH2B3-201ENST00000341259 MYT1LQ9UL68 1186 aa28.02■■■□□ 2.08
SH2B3-201ENST00000341259 CCDC180Q9P1Z9 1646 aa28.02■■■□□ 2.08
SH2B3-201ENST00000341259 POLR3GLQ9BT43 218 aa27.92■■■□□ 2.06
SH2B3-201ENST00000341259 FAM50AQ14320 339 aaKnown RBP27.89■■■□□ 2.06
SH2B3-201ENST00000341259 MYT1Q01538 1121 aa27.85■■■□□ 2.05
SH2B3-201ENST00000341259 DIEXFQ68CQ4 756 aaKnown RBP27.75■■■□□ 2.03
SH2B3-201ENST00000341259 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
SH2B3-201ENST00000341259 CNGB1Q14028 1251 aaPredicted RBP27.63■■■□□ 2.01
SH2B3-201ENST00000341259 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
SH2B3-201ENST00000341259 NEUROD1Q13562 356 aa27.56■■■□□ 2
SH2B3-201ENST00000341259 FBLN2P98095 1184 aa27.47■■□□□ 1.99
SH2B3-201ENST00000341259 P3H3Q8IVL6 736 aa27.46■■□□□ 1.99
SH2B3-201ENST00000341259 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
SH2B3-201ENST00000341259 SLC4A1APQ9BWU0 796 aaKnown RBP27.3■■□□□ 1.96
SH2B3-201ENST00000341259 RB1CC1Q8TDY2 1594 aa27.29■■□□□ 1.96
SH2B3-201ENST00000341259 ZNF316A6NFI3 1004 aaPredicted RBP27.27■■□□□ 1.96
SH2B3-201ENST00000341259 ARID3CA6NKF2 412 aa27.25■■□□□ 1.95
SH2B3-201ENST00000341259 ZNF326Q5BKZ1 582 aaKnown RBP27.2■■□□□ 1.95
SH2B3-201ENST00000341259 DAXXQ9UER7 740 aaPredicted RBP27.18■■□□□ 1.94
SH2B3-201ENST00000341259 RSF1Q96T23 1441 aaPredicted RBP27.18■■□□□ 1.94
SH2B3-201ENST00000341259 ANP32CO43423 234 aa27.15■■□□□ 1.94
SH2B3-201ENST00000341259 NACADO15069 1562 aa27.11■■□□□ 1.93
SH2B3-201ENST00000341259 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
SH2B3-201ENST00000341259 GTF3C3Q9Y5Q9 886 aa27.01■■□□□ 1.91
SH2B3-201ENST00000341259 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
SH2B3-201ENST00000341259 CDK11AQ9UQ88 783 aaPredicted RBP27■■□□□ 1.91
SH2B3-201ENST00000341259 BCANQ96GW7 911 aa26.9■■□□□ 1.9
SH2B3-201ENST00000341259 CLIP1P30622 1438 aa26.83■■□□□ 1.89
SH2B3-201ENST00000341259 CLSPNQ9HAW4 1339 aa26.81■■□□□ 1.88
SH2B3-201ENST00000341259 EEA1Q15075 1411 aa26.78■■□□□ 1.88
SH2B3-201ENST00000341259 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
SH2B3-201ENST00000341259 TONSLQ96HA7 1378 aa26.77■■□□□ 1.88
SH2B3-201ENST00000341259 ACIN1Q9UKV3 1341 aaKnown RBP26.77■■□□□ 1.88
SH2B3-201ENST00000341259 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
SH2B3-201ENST00000341259 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.873e-6■■■■□ 26.3
SH2B3-201ENST00000341259 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
SH2B3-201ENST00000341259 BAZ1AQ9NRL2 1556 aaPredicted RBP26.68■■□□□ 1.86
SH2B3-201ENST00000341259 CHIC2Q9UKJ5 165 aa26.65■■□□□ 1.86
SH2B3-201ENST00000341259 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.85
SH2B3-201ENST00000341259 MTUS2Q5JR59 1369 aa26.62■■□□□ 1.85
SH2B3-201ENST00000341259 RTL5Q5HYW3 569 aaPredicted RBP26.58■■□□□ 1.84
SH2B3-201ENST00000341259 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
SH2B3-201ENST00000341259 TNIKQ9UKE5 1360 aa26.53■■□□□ 1.84
SH2B3-201ENST00000341259 DDX10Q13206 875 aaKnown RBP26.52■■□□□ 1.84
SH2B3-201ENST00000341259 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
SH2B3-201ENST00000341259 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
SH2B3-201ENST00000341259 CANXP27824 592 aaKnown RBP26.45■■□□□ 1.82
SH2B3-201ENST00000341259 NPM1P06748 294 aaKnown RBP eCLIP26.43■■□□□ 1.82
SH2B3-201ENST00000341259 CHGAP10645 457 aaKnown RBP26.4■■□□□ 1.82
SH2B3-201ENST00000341259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.39■■□□□ 1.82
SH2B3-201ENST00000341259 TSPY4P0CV99 314 aa26.39■■□□□ 1.81
SH2B3-201ENST00000341259 TSPY10P0CW01 314 aa26.39■■□□□ 1.81
SH2B3-201ENST00000341259 NEFMP07197 916 aa26.37■■□□□ 1.81
SH2B3-201ENST00000341259 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
SH2B3-201ENST00000341259 HNRNPUQ00839 825 aaKnown RBP eCLIP26.33■■□□□ 1.81
SH2B3-201ENST00000341259 RRP7BPQ9NSQ0 103 aa26.32■■□□□ 1.8
SH2B3-201ENST00000341259 ZBTB47Q9UFB7 747 aaPredicted RBP26.32■■□□□ 1.8
SH2B3-201ENST00000341259 FAM9BQ8IZU0 186 aa26.3■■□□□ 1.8
SH2B3-201ENST00000341259 ESF1Q9H501 851 aaKnown RBP26.3■■□□□ 1.8
SH2B3-201ENST00000341259 FKBP8Q14318 412 aa26.29■■□□□ 1.8
SH2B3-201ENST00000341259 STAG3Q9UJ98 1225 aa26.25■■□□□ 1.79
SH2B3-201ENST00000341259 SOGA1O94964 1423 aa26.25■■□□□ 1.79
SH2B3-201ENST00000341259 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
SH2B3-201ENST00000341259 SLC24A1O60721 1099 aa26.23■■□□□ 1.79
SH2B3-201ENST00000341259 MIER1Q8N108 512 aa26.23■■□□□ 1.79
SH2B3-201ENST00000341259 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
SH2B3-201ENST00000341259 HIRIP3Q9BW71 556 aaPredicted RBP26.2■■□□□ 1.78
SH2B3-201ENST00000341259 PLEKHD1A6NEE1 506 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms