Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 AC020916.1-201ENST00000587762 1774 ntBASIC13.53□□□□□ -0.24
LST1O00453 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LST1O00453 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.53□□□□□ -0.24
LST1O00453 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LST1O00453 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LST1O00453 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.53□□□□□ -0.24
LST1O00453 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
LST1O00453 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LST1O00453 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LST1O00453 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LST1O00453 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LST1O00453 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
LST1O00453 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LST1O00453 METRNL-202ENST00000570778 967 ntTSL 5 BASIC13.52□□□□□ -0.25
LST1O00453 MIR3648-2-201ENST00000581792 180 ntBASIC13.52□□□□□ -0.25
LST1O00453 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 MIR3648-1-201ENST00000615959 180 ntBASIC13.52□□□□□ -0.25
LST1O00453 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LST1O00453 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.52□□□□□ -0.25
LST1O00453 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.52□□□□□ -0.25
LST1O00453 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.52□□□□□ -0.25
LST1O00453 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
LST1O00453 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.52□□□□□ -0.25
LST1O00453 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LST1O00453 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LST1O00453 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 LTB4R2-202ENST00000528054 3092 ntBASIC13.51□□□□□ -0.25
LST1O00453 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LST1O00453 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.51□□□□□ -0.25
LST1O00453 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 MACF1-219ENST00000484793 834 ntTSL 2 BASIC13.51□□□□□ -0.25
LST1O00453 AC018755.3-202ENST00000596210 929 ntBASIC13.51□□□□□ -0.25
LST1O00453 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.51□□□□□ -0.25
LST1O00453 AC093503.3-201ENST00000624917 2352 ntBASIC13.51□□□□□ -0.25
LST1O00453 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LST1O00453 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.5□□□□□ -0.25
LST1O00453 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LST1O00453 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LST1O00453 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LST1O00453 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.5□□□□□ -0.25
LST1O00453 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LST1O00453 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LST1O00453 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LST1O00453 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LST1O00453 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
LST1O00453 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms