RNA–Protein interactions for RNA: ENST00000397463.2

LYPD1-202, Transcript of LY6/PLAUR domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYPD1, Length 1,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-202ENST00000397463 NISCHQ9Y2I1 1504 aa47.62■■■■■ 5.21
LYPD1-202ENST00000397463 CCDC180Q9P1Z9 1646 aa41.54■■■■■ 4.24
LYPD1-202ENST00000397463 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
LYPD1-202ENST00000397463 DCAF8L2P0C7V8 631 aa39.38■■■■□ 3.89
LYPD1-202ENST00000397463 DCAF1Q9Y4B6 1507 aa39.36■■■■□ 3.89
LYPD1-202ENST00000397463 ABCC9O60706 1549 aa39.33■■■■□ 3.89
LYPD1-202ENST00000397463 MYO15BQ96JP2 1530 aa38.92■■■■□ 3.82
LYPD1-202ENST00000397463 SHROOM4Q9ULL8 1493 aa38.85■■■■□ 3.81
LYPD1-202ENST00000397463 NACADO15069 1562 aa38.7■■■■□ 3.79
LYPD1-202ENST00000397463 RB1CC1Q8TDY2 1594 aa38.38■■■■□ 3.73
LYPD1-202ENST00000397463 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
LYPD1-202ENST00000397463 UNC13AQ9UPW8 1703 aa37.62■■■■□ 3.61
LYPD1-202ENST00000397463 SUPT5HO00267 1087 aaKnown RBP37.36■■■■□ 3.57
LYPD1-202ENST00000397463 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
LYPD1-202ENST00000397463 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
LYPD1-202ENST00000397463 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
LYPD1-202ENST00000397463 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
LYPD1-202ENST00000397463 MROH2BQ7Z745 1585 aa36.79■■■■□ 3.48
LYPD1-202ENST00000397463 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
LYPD1-202ENST00000397463 SMARCA4P51532 1647 aa36.62■■■■□ 3.45
LYPD1-202ENST00000397463 WIZO95785 1651 aa36.5■■■■□ 3.43
LYPD1-202ENST00000397463 PEG3Q9GZU2 1588 aa36.17■■■■□ 3.38
LYPD1-202ENST00000397463 EIF4G1Q04637 1599 aaKnown RBP36.12■■■■□ 3.37
LYPD1-202ENST00000397463 TOP2AP11388 1531 aaKnown RBP36.11■■■■□ 3.37
LYPD1-202ENST00000397463 ATAD2BQ9ULI0 1458 aa36.03■■■■□ 3.36
LYPD1-202ENST00000397463 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
LYPD1-202ENST00000397463 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
LYPD1-202ENST00000397463 CCDC88BA6NC98 1476 aa35.75■■■■□ 3.31
LYPD1-202ENST00000397463 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
LYPD1-202ENST00000397463 NCAPD3P42695 1498 aa35.72■■■■□ 3.31
LYPD1-202ENST00000397463 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
LYPD1-202ENST00000397463 CC2D2AQ9P2K1 1620 aa35.59■■■■□ 3.29
LYPD1-202ENST00000397463 TRIM41Q8WV44 630 aa35.14■■■■□ 3.22
LYPD1-202ENST00000397463 ABCC8Q09428 1581 aa34.99■■■■□ 3.19
LYPD1-202ENST00000397463 CFTRP13569 1480 aa34.93■■■■□ 3.18
LYPD1-202ENST00000397463 CADPSQ9ULU8 1353 aa34.81■■■■□ 3.16
LYPD1-202ENST00000397463 WRNQ14191 1432 aaPredicted RBP eCLIP34.77■■■■□ 3.16
LYPD1-202ENST00000397463 PRDM2Q13029 1718 aa34.74■■■■□ 3.15
LYPD1-202ENST00000397463 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
LYPD1-202ENST00000397463 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
LYPD1-202ENST00000397463 NESP48681 1621 aa34.52■■■■□ 3.12
LYPD1-202ENST00000397463 LAMC3Q9Y6N6 1575 aa34.51■■■■□ 3.12
LYPD1-202ENST00000397463 TOP2BQ02880 1626 aa34.49■■■■□ 3.11
LYPD1-202ENST00000397463 FAM9AQ8IZU1 332 aaPredicted RBP34.49■■■■□ 3.11
LYPD1-202ENST00000397463 BIVM-ERCC5R4GMW8 1640 aa34.45■■■■□ 3.11
LYPD1-202ENST00000397463 FANCD2Q9BXW9 1451 aa34.43■■■■□ 3.1
LYPD1-202ENST00000397463 CUX1P39880 1505 aa34.41■■■■□ 3.1
LYPD1-202ENST00000397463 LOC105371045A0A1W2PR82 267 aa34.37■■■■□ 3.09
LYPD1-202ENST00000397463 SOGA1O94964 1423 aa34.33■■■■□ 3.09
LYPD1-202ENST00000397463 PDS5BQ9NTI5 1447 aa34.25■■■■□ 3.07
LYPD1-202ENST00000397463 EEA1Q15075 1411 aa34.24■■■■□ 3.07
LYPD1-202ENST00000397463 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
LYPD1-202ENST00000397463 RUSC2Q8N2Y8 1516 aa34.2■■■■□ 3.07
LYPD1-202ENST00000397463 DNMBPQ6XZF7 1577 aa34.11■■■■□ 3.05
LYPD1-202ENST00000397463 KIF21AQ7Z4S6 1674 aa34.11■■■■□ 3.05
LYPD1-202ENST00000397463 CSRNP3Q8WYN3 585 aa34.07■■■■□ 3.04
LYPD1-202ENST00000397463 TOPBP1Q92547 1522 aa34.05■■■■□ 3.04
LYPD1-202ENST00000397463 FGD5Q6ZNL6 1462 aa34.04■■■■□ 3.04
LYPD1-202ENST00000397463 EHMT2Q96KQ7 1210 aa34.02■■■■□ 3.04
LYPD1-202ENST00000397463 URB2Q14146 1524 aaKnown RBP34■■■■□ 3.03
LYPD1-202ENST00000397463 KIF27Q86VH2 1401 aa33.9■■■■□ 3.02
LYPD1-202ENST00000397463 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
LYPD1-202ENST00000397463 CUX2O14529 1486 aa33.82■■■■□ 3
LYPD1-202ENST00000397463 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
LYPD1-202ENST00000397463 KIF21BO75037 1637 aa33.81■■■■□ 3
LYPD1-202ENST00000397463 GOLGA3Q08378 1498 aa33.78■■■■□ 3
LYPD1-202ENST00000397463 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
LYPD1-202ENST00000397463 ERCC6Q03468 1493 aa33.74■■■□□ 2.99
LYPD1-202ENST00000397463 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
LYPD1-202ENST00000397463 TNIKQ9UKE5 1360 aa33.66■■■□□ 2.98
LYPD1-202ENST00000397463 PRXQ9BXM0 1461 aa33.66■■■□□ 2.98
LYPD1-202ENST00000397463 UBTFP17480 764 aaKnown RBP33.65■■■□□ 2.98
LYPD1-202ENST00000397463 WDR62O43379 1518 aa33.64■■■□□ 2.98
LYPD1-202ENST00000397463 RAPGEF2Q9Y4G8 1499 aa33.64■■■□□ 2.98
LYPD1-202ENST00000397463 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
LYPD1-202ENST00000397463 IGF1RP08069 1367 aa33.6■■■□□ 2.97
LYPD1-202ENST00000397463 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
LYPD1-202ENST00000397463 TARBP1Q13395 1621 aaKnown RBP33.54■■■□□ 2.96
LYPD1-202ENST00000397463 THOC2Q8NI27 1593 aaKnown RBP33.54■■■□□ 2.96
LYPD1-202ENST00000397463 CEP162Q5TB80 1403 aa33.49■■■□□ 2.95
LYPD1-202ENST00000397463 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
LYPD1-202ENST00000397463 TDRD9Q8NDG6 1382 aaKnown RBP33.46■■■□□ 2.95
LYPD1-202ENST00000397463 CARMIL1Q5VZK9 1371 aa33.43■■■□□ 2.94
LYPD1-202ENST00000397463 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
LYPD1-202ENST00000397463 IFT140Q96RY7 1462 aa33.39■■■□□ 2.94
LYPD1-202ENST00000397463 CUL7Q14999 1698 aa33.34■■■□□ 2.93
LYPD1-202ENST00000397463 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.91
LYPD1-202ENST00000397463 CLIP1P30622 1438 aa33.24■■■□□ 2.91
LYPD1-202ENST00000397463 ZNF608Q9ULD9 1512 aaPredicted RBP33.22■■■□□ 2.91
LYPD1-202ENST00000397463 PBRM1Q86U86 1689 aa33.22■■■□□ 2.91
LYPD1-202ENST00000397463 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
LYPD1-202ENST00000397463 RANGAP1P46060 587 aaPredicted RBP33.13■■■□□ 2.89
LYPD1-202ENST00000397463 EIF4G3O43432 1585 aaKnown RBP33.11■■■□□ 2.89
LYPD1-202ENST00000397463 FHAD1B1AJZ9 1412 aa33.04■■■□□ 2.88
LYPD1-202ENST00000397463 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
LYPD1-202ENST00000397463 CTTNBP2Q8WZ74 1663 aa32.97■■■□□ 2.87
LYPD1-202ENST00000397463 VPS8Q8N3P4 1428 aa32.94■■■□□ 2.86
LYPD1-202ENST00000397463 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
LYPD1-202ENST00000397463 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
LYPD1-202ENST00000397463 ARHGAP35Q9NRY4 1499 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms