Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LST1O00453 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
LST1O00453 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
LST1O00453 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LST1O00453 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC21.93■■□□□ 1.1
LST1O00453 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LST1O00453 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.54■■□□□ 1.04
LST1O00453 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LST1O00453 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LST1O00453 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LST1O00453 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.13■□□□□ 0.97
LST1O00453 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LST1O00453 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LST1O00453 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LST1O00453 HES6-203ENST00000409160 1600 ntTSL 2 BASIC20.84■□□□□ 0.93
LST1O00453 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LST1O00453 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
LST1O00453 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LST1O00453 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.56■□□□□ 0.88
LST1O00453 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LST1O00453 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LST1O00453 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LST1O00453 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
LST1O00453 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LST1O00453 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LST1O00453 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LST1O00453 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LST1O00453 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.23■□□□□ 0.83
LST1O00453 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LST1O00453 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LST1O00453 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LST1O00453 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LST1O00453 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LST1O00453 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LST1O00453 AL356512.1-201ENST00000607453 1739 ntBASIC20.13■□□□□ 0.81
LST1O00453 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LST1O00453 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LST1O00453 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LST1O00453 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LST1O00453 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
LST1O00453 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LST1O00453 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LST1O00453 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LST1O00453 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LST1O00453 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LST1O00453 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.87■□□□□ 0.77
LST1O00453 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LST1O00453 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.85■□□□□ 0.77
LST1O00453 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.85■□□□□ 0.77
LST1O00453 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LST1O00453 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LST1O00453 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LST1O00453 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LST1O00453 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LST1O00453 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LST1O00453 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LST1O00453 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LST1O00453 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.6■□□□□ 0.73
LST1O00453 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LST1O00453 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LST1O00453 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LST1O00453 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LST1O00453 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LST1O00453 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.51■□□□□ 0.71
LST1O00453 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LST1O00453 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LST1O00453 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LST1O00453 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LST1O00453 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
LST1O00453 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LST1O00453 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.38■□□□□ 0.69
LST1O00453 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LST1O00453 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LST1O00453 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.37■□□□□ 0.69
LST1O00453 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LST1O00453 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.3■□□□□ 0.68
LST1O00453 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.3■□□□□ 0.68
LST1O00453 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
LST1O00453 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LST1O00453 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LST1O00453 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LST1O00453 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.24■□□□□ 0.67
LST1O00453 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
LST1O00453 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.22■□□□□ 0.67
LST1O00453 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LST1O00453 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LST1O00453 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LST1O00453 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LST1O00453 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LST1O00453 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LST1O00453 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
LST1O00453 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.16■□□□□ 0.66
LST1O00453 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LST1O00453 AL161658.1-201ENST00000623641 1967 ntBASIC19.13■□□□□ 0.65
LST1O00453 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LST1O00453 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LST1O00453 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LST1O00453 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LST1O00453 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LST1O00453 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms