Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 PRPSAP1-205ENST00000442767 908 ntTSL 520.85■□□□□ 0.937e-7■■□□□ 14.4
DDX59Q5T1V6 PRPSAP1-202ENST00000423915 549 ntTSL 414.8□□□□□ -0.047e-7■■□□□ 14.4
DDX59Q5T1V6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.532e-7■■□□□ 14.4
DDX59Q5T1V6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.22■□□□□ 0.517e-15■■□□□ 14.4
DDX59Q5T1V6 EXOC7-212ENST00000467586 2393 ntTSL 218.06■□□□□ 0.482e-7■■□□□ 14.4
DDX59Q5T1V6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.82■□□□□ 0.442e-7■■□□□ 14.4
DDX59Q5T1V6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.16■□□□□ 0.187e-15■■□□□ 14.4
DDX59Q5T1V6 GNAI2-206ENST00000446079 2086 ntTSL 1 (best)14.77□□□□□ -0.042e-7■■□□□ 14.4
DDX59Q5T1V6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.58□□□□□ -0.087e-15■■□□□ 14.4
DDX59Q5T1V6 SGCE-208ENST00000450385 815 ntTSL 314.35□□□□□ -0.117e-15■■□□□ 14.4
DDX59Q5T1V6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.78□□□□□ -0.22e-7■■□□□ 14.4
DDX59Q5T1V6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.36□□□□□ -0.277e-15■■□□□ 14.4
DDX59Q5T1V6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.35□□□□□ -0.272e-7■■□□□ 14.4
DDX59Q5T1V6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.33□□□□□ -0.277e-15■■□□□ 14.4
DDX59Q5T1V6 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.412e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.442e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC11.9□□□□□ -0.512e-7■■□□□ 14.4
DDX59Q5T1V6 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.537e-15■■□□□ 14.4
DDX59Q5T1V6 SGCE-203ENST00000425444 597 ntTSL 311.41□□□□□ -0.587e-15■■□□□ 14.4
DDX59Q5T1V6 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.62e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-203ENST00000357231 1924 ntTSL 1 (best)11.31□□□□□ -0.62e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC10.84□□□□□ -0.672e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC10.48□□□□□ -0.732e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-219ENST00000592559 645 ntTSL 59.86□□□□□ -0.832e-7■■□□□ 14.4
DDX59Q5T1V6 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.42□□□□□ -1.062e-7■■□□□ 14.4
DDX59Q5T1V6 L3MBTL1-205ENST00000422861 4322 ntAPPRIS ALT2 TSL 29.08□□□□□ -0.963e-18■■□□□ 14.4
DDX59Q5T1V6 L3MBTL1-213ENST00000471977 318 ntTSL 38.91□□□□□ -0.983e-18■■□□□ 14.4
DDX59Q5T1V6 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.123e-18■■□□□ 14.4
DDX59Q5T1V6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.253e-8■■□□□ 14.4
DDX59Q5T1V6 SLC9A1-202ENST00000374084 695 ntTSL 57.68□□□□□ -1.181e-9■■□□□ 14.3
DDX59Q5T1V6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.596e-8■■□□□ 14.3
DDX59Q5T1V6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.21■□□□□ 0.516e-8■■□□□ 14.3
DDX59Q5T1V6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.283e-11■■□□□ 14.3
DDX59Q5T1V6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.243e-11■■□□□ 14.3
DDX59Q5T1V6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.163e-11■■□□□ 14.3
DDX59Q5T1V6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.935e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-203ENST00000577379 861 ntTSL 520.47■□□□□ 0.875e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-211ENST00000585091 739 ntTSL 317.59■□□□□ 0.415e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-209ENST00000584514 882 ntTSL 216.97■□□□□ 0.315e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-205ENST00000580090 752 ntTSL 216.92■□□□□ 0.35e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.75■□□□□ 0.275e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-207ENST00000583767 894 ntTSL 316.73■□□□□ 0.275e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.96■□□□□ 0.155e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-204ENST00000579520 702 ntTSL 315.5■□□□□ 0.075e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-210ENST00000584600 730 ntTSL 214.62□□□□□ -0.075e-7■■□□□ 14.3
DDX59Q5T1V6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.07□□□□□ -0.325e-7■■□□□ 14.3
DDX59Q5T1V6 DROSHA-215ENST00000512076 1124 ntTSL 1 (best)7.8□□□□□ -1.163e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-215ENST00000602164 582 ntTSL 324.35■■□□□ 1.495e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.035e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.1■□□□□ 0.975e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-210ENST00000598058 510 ntTSL 218.94■□□□□ 0.625e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.35■□□□□ 0.375e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.85■□□□□ 0.295e-10■■□□□ 14.3
DDX59Q5T1V6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.25e-10■■□□□ 14.3
DDX59Q5T1V6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.075e-11■■□□□ 14.2
DDX59Q5T1V6 COL18A1-201ENST00000342220 3386 ntTSL 212.41□□□□□ -0.422e-7■■□□□ 14.2
DDX59Q5T1V6 KPNB1-205ENST00000577918 859 ntTSL 313.28□□□□□ -0.289e-8■■□□□ 14.2
DDX59Q5T1V6 KPNB1-214ENST00000583648 896 ntTSL 413.03□□□□□ -0.329e-8■■□□□ 14.2
DDX59Q5T1V6 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.819e-8■■□□□ 14.2
DDX59Q5T1V6 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.59□□□□□ -1.049e-8■■□□□ 14.2
DDX59Q5T1V6 PKP4-209ENST00000479398 550 ntTSL 518.71■□□□□ 0.592e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-204ENST00000421462 3099 ntTSL 216.45■□□□□ 0.222e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-205ENST00000426248 4134 ntTSL 1 (best)15.87■□□□□ 0.132e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-206ENST00000452162 2359 ntTSL 1 (best)10.2□□□□□ -0.782e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.822e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-203ENST00000411900 552 ntTSL 49.02□□□□□ -0.972e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.052e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-207ENST00000457109 520 ntTSL 37.82□□□□□ -1.162e-7■■□□□ 14.2
DDX59Q5T1V6 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.28□□□□□ -1.242e-7■■□□□ 14.2
DDX59Q5T1V6 CSK-208ENST00000567123 556 ntTSL 413.36□□□□□ -0.275e-8■■□□□ 14.2
DDX59Q5T1V6 EXD3-205ENST00000475006 1132 ntTSL 319.06■□□□□ 0.641e-8■■□□□ 14.2
DDX59Q5T1V6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.06■□□□□ 0.641e-8■■□□□ 14.2
DDX59Q5T1V6 TMC6-213ENST00000589933 580 ntTSL 318.76■□□□□ 0.591e-8■■□□□ 14.2
DDX59Q5T1V6 EXD3-202ENST00000460390 1432 ntTSL 217.43■□□□□ 0.381e-8■■□□□ 14.2
DDX59Q5T1V6 SYVN1-212ENST00000530451 656 ntTSL 517.17■□□□□ 0.341e-8■■□□□ 14.2
DDX59Q5T1V6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.321e-8■■□□□ 14.2
DDX59Q5T1V6 EXD3-211ENST00000490886 1123 ntTSL 517.06■□□□□ 0.321e-8■■□□□ 14.2
DDX59Q5T1V6 ETV4-210ENST00000590236 616 ntTSL 314.14□□□□□ -0.152e-15■■□□□ 14.2
DDX59Q5T1V6 TCF25-220ENST00000567171 1535 ntTSL 215.37■□□□□ 0.052e-7■■□□□ 14.1
DDX59Q5T1V6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.747e-8■■□□□ 14.1
DDX59Q5T1V6 ARID4B-208ENST00000466653 2315 ntTSL 216.72■□□□□ 0.277e-8■■□□□ 14.1
DDX59Q5T1V6 ARID4B-204ENST00000418304 1759 ntTSL 516.48■□□□□ 0.237e-8■■□□□ 14.1
DDX59Q5T1V6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.6■□□□□ 0.097e-8■■□□□ 14.1
DDX59Q5T1V6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.217e-8■■□□□ 14.1
DDX59Q5T1V6 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)11.84□□□□□ -0.517e-8■■□□□ 14.1
DDX59Q5T1V6 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)11.12□□□□□ -0.637e-8■■□□□ 14.1
DDX59Q5T1V6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.681e-6■■□□□ 14.1
DDX59Q5T1V6 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.79□□□□□ -0.361e-6■■□□□ 14.1
DDX59Q5T1V6 CERS4-203ENST00000558268 713 ntTSL 322.84■■□□□ 1.253e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.55■□□□□ 0.883e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.47■□□□□ 0.713e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-210ENST00000559490 420 ntTSL 519.38■□□□□ 0.693e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.663e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-214ENST00000595722 1826 ntTSL 1 (best)18.49■□□□□ 0.553e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-213ENST00000561053 768 ntTSL 517.91■□□□□ 0.463e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.423e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-206ENST00000558501 873 ntTSL 515.74■□□□□ 0.113e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-211ENST00000560412 568 ntTSL 415.63■□□□□ 0.093e-7■■□□□ 14.1
DDX59Q5T1V6 CERS4-212ENST00000561008 531 ntTSL 413.68□□□□□ -0.223e-7■■□□□ 14.1
DDX59Q5T1V6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.17■■□□□ 1.145e-8■■□□□ 14.1
Retrieved 100 of 7,289 protein–RNA pairs in 39.3 ms