RNA–Protein interactions for RNA: ENST00000567123.1

CSK-208, Transcript of C-terminal Src kinase, humanhuman

TSL 4

Gene CSK, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-208ENST00000567123 NISCHQ9Y2I1 1504 aa38.92■■■■□ 3.82
CSK-208ENST00000567123 ABCC9O60706 1549 aa35.59■■■■□ 3.29
CSK-208ENST00000567123 CCDC180Q9P1Z9 1646 aa35.09■■■■□ 3.21
CSK-208ENST00000567123 DNAJC5BQ9UF47 199 aa33.76■■■□□ 2.99
CSK-208ENST00000567123 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
CSK-208ENST00000567123 NACADO15069 1562 aa33.29■■■□□ 2.92
CSK-208ENST00000567123 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
CSK-208ENST00000567123 DCAF8L2P0C7V8 631 aa33.04■■■□□ 2.88
CSK-208ENST00000567123 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
CSK-208ENST00000567123 BICRAQ9NZM4 1560 aa32.69■■■□□ 2.82
CSK-208ENST00000567123 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
CSK-208ENST00000567123 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
CSK-208ENST00000567123 ZCCHC6Q5VYS8 1495 aaKnown RBP32.18■■■□□ 2.74
CSK-208ENST00000567123 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
CSK-208ENST00000567123 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
CSK-208ENST00000567123 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
CSK-208ENST00000567123 SCRIBQ14160 1630 aa32■■■□□ 2.71
CSK-208ENST00000567123 EIF4G1Q04637 1599 aaKnown RBP31.93■■■□□ 2.7
CSK-208ENST00000567123 DNAJC5Q9H3Z4 198 aa31.3■■■□□ 2.6
CSK-208ENST00000567123 CUX2O14529 1486 aa30.82■■■□□ 2.53
CSK-208ENST00000567123 ERCC6Q03468 1493 aa30.76■■■□□ 2.51
CSK-208ENST00000567123 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
CSK-208ENST00000567123 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
CSK-208ENST00000567123 HMGXB3Q12766 1538 aa30.49■■■□□ 2.47
CSK-208ENST00000567123 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
CSK-208ENST00000567123 SMARCA4P51532 1647 aa30.46■■■□□ 2.47
CSK-208ENST00000567123 NESP48681 1621 aa30.44■■■□□ 2.46
CSK-208ENST00000567123 BAZ1BQ9UIG0 1483 aaKnown RBP30.3■■■□□ 2.44
CSK-208ENST00000567123 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
CSK-208ENST00000567123 THOC2Q8NI27 1593 aaKnown RBP30.22■■■□□ 2.43
CSK-208ENST00000567123 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
CSK-208ENST00000567123 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
CSK-208ENST00000567123 MROH2BQ7Z745 1585 aa30■■■□□ 2.39
CSK-208ENST00000567123 KIF21AQ7Z4S6 1674 aa29.99■■■□□ 2.39
CSK-208ENST00000567123 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
CSK-208ENST00000567123 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
CSK-208ENST00000567123 CADPSQ9ULU8 1353 aa29.79■■■□□ 2.36
CSK-208ENST00000567123 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
CSK-208ENST00000567123 WDR62O43379 1518 aa29.71■■■□□ 2.35
CSK-208ENST00000567123 WIZO95785 1651 aa29.59■■■□□ 2.33
CSK-208ENST00000567123 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
CSK-208ENST00000567123 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
CSK-208ENST00000567123 CFTRP13569 1480 aa29.37■■■□□ 2.29
CSK-208ENST00000567123 OSCARQ8IYS5 282 aa29.31■■■□□ 2.28
CSK-208ENST00000567123 URB2Q14146 1524 aaKnown RBP29.28■■■□□ 2.28
CSK-208ENST00000567123 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
CSK-208ENST00000567123 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
CSK-208ENST00000567123 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
CSK-208ENST00000567123 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
CSK-208ENST00000567123 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
CSK-208ENST00000567123 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
CSK-208ENST00000567123 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
CSK-208ENST00000567123 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
CSK-208ENST00000567123 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
CSK-208ENST00000567123 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
CSK-208ENST00000567123 TOPBP1Q92547 1522 aa28.87■■■□□ 2.21
CSK-208ENST00000567123 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
CSK-208ENST00000567123 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
CSK-208ENST00000567123 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
CSK-208ENST00000567123 CYB5RLQ6IPT4 315 aa28.69■■■□□ 2.18
CSK-208ENST00000567123 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.187e-6■■■□□ 17.6
CSK-208ENST00000567123 CHD1O14646 1710 aa28.63■■■□□ 2.17
CSK-208ENST00000567123 TARBP1Q13395 1621 aaKnown RBP28.62■■■□□ 2.17
CSK-208ENST00000567123 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
CSK-208ENST00000567123 FBLN2P98095 1184 aa28.56■■■□□ 2.16
CSK-208ENST00000567123 POLA1P09884 1462 aaPredicted RBP28.55■■■□□ 2.16
CSK-208ENST00000567123 TRHP20396 242 aaPredicted RBP28.53■■■□□ 2.16
CSK-208ENST00000567123 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
CSK-208ENST00000567123 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
CSK-208ENST00000567123 SOGA1O94964 1423 aa28.39■■■□□ 2.14
CSK-208ENST00000567123 SNAPC4Q5SXM2 1469 aa28.38■■■□□ 2.13
CSK-208ENST00000567123 CLASP1Q7Z460 1538 aa28.33■■■□□ 2.13
CSK-208ENST00000567123 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
CSK-208ENST00000567123 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
CSK-208ENST00000567123 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
CSK-208ENST00000567123 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
CSK-208ENST00000567123 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
CSK-208ENST00000567123 CUX1P39880 1505 aa28.22■■■□□ 2.11
CSK-208ENST00000567123 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
CSK-208ENST00000567123 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
CSK-208ENST00000567123 GAPVD1Q14C86 1478 aa28.06■■■□□ 2.08
CSK-208ENST00000567123 PBRM1Q86U86 1689 aa28.03■■■□□ 2.08
CSK-208ENST00000567123 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
CSK-208ENST00000567123 ABCA10Q8WWZ4 1543 aa27.95■■■□□ 2.06
CSK-208ENST00000567123 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
CSK-208ENST00000567123 ERCC6L2Q5T890 1561 aa27.87■■■□□ 2.05
CSK-208ENST00000567123 GRIN2AQ12879 1464 aa27.85■■■□□ 2.05
CSK-208ENST00000567123 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
CSK-208ENST00000567123 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
CSK-208ENST00000567123 NUP160Q12769 1436 aa27.78■■■□□ 2.04
CSK-208ENST00000567123 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
CSK-208ENST00000567123 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
CSK-208ENST00000567123 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
CSK-208ENST00000567123 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
CSK-208ENST00000567123 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
CSK-208ENST00000567123 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
CSK-208ENST00000567123 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
CSK-208ENST00000567123 PRG4Q92954 1404 aaPredicted RBP27.55■■■□□ 2
CSK-208ENST00000567123 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
CSK-208ENST00000567123 JPH4Q96JJ6 628 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms