Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.242e-9■□□□□ 10.3
FTOQ9C0B1 ENO2-210ENST00000539713 543 ntTSL 418.51■□□□□ 0.556e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-207ENST00000537688 547 ntTSL 518.39■□□□□ 0.536e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.376e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.246e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-212ENST00000542509 825 ntTSL 515.84■□□□□ 0.136e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-208ENST00000537838 541 ntTSL 415.18■□□□□ 0.026e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-206ENST00000536199 823 ntTSL 515.17■□□□□ 0.026e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC15.01□□□□□ -0.016e-6■□□□□ 10.3
FTOQ9C0B1 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.21□□□□□ -0.136e-6■□□□□ 10.3
FTOQ9C0B1 RABL6-208ENST00000464941 3361 ntTSL 219.94■□□□□ 0.786e-11■□□□□ 10.3
FTOQ9C0B1 OAZ1-205ENST00000589361 679 ntTSL 1 (best)17.9■□□□□ 0.461e-26■□□□□ 10.3
FTOQ9C0B1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.336e-10■□□□□ 10.2
FTOQ9C0B1 SAR1A-203ENST00000373239 468 ntTSL 316.14■□□□□ 0.176e-10■□□□□ 10.2
FTOQ9C0B1 AC132872.1-201ENST00000566986 1195 ntBASIC12.95□□□□□ -0.346e-10■□□□□ 10.2
FTOQ9C0B1 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.646e-10■□□□□ 10.2
FTOQ9C0B1 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-8■□□□□ 10.2
FTOQ9C0B1 USP1-203ENST00000442679 502 ntTSL 213.81□□□□□ -0.21e-8■□□□□ 10.2
FTOQ9C0B1 USP1-204ENST00000452143 893 ntTSL 312.69□□□□□ -0.381e-8■□□□□ 10.2
FTOQ9C0B1 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.131e-8■□□□□ 10.2
FTOQ9C0B1 CANX-210ENST00000505090 485 ntTSL 211.72□□□□□ -0.531e-17■□□□□ 10.2
FTOQ9C0B1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.22■■■□□ 2.275e-11■□□□□ 10.2
FTOQ9C0B1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.79■■■□□ 2.25e-11■□□□□ 10.2
FTOQ9C0B1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.79■■■□□ 2.25e-11■□□□□ 10.2
FTOQ9C0B1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.125e-11■□□□□ 10.2
FTOQ9C0B1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.61■■■□□ 2.015e-11■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-205ENST00000564630 2079 ntTSL 523.64■■□□□ 1.382e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-208ENST00000566515 1634 ntTSL 523.52■■□□□ 1.362e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-204ENST00000563065 1450 ntTSL 219.63■□□□□ 0.732e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-211ENST00000567434 713 ntTSL 319.45■□□□□ 0.72e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-215ENST00000569745 1356 ntTSL 518.69■□□□□ 0.582e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-203ENST00000562553 736 ntTSL 217.37■□□□□ 0.372e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-213ENST00000568507 1385 ntTSL 217.28■□□□□ 0.362e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.362e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-206ENST00000565296 1831 ntTSL 215.66■□□□□ 0.12e-7■□□□□ 10.2
FTOQ9C0B1 CCNDBP1-209ENST00000566833 577 ntTSL 215.18■□□□□ 0.022e-7■□□□□ 10.2
FTOQ9C0B1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.61e-6■□□□□ 10.2
FTOQ9C0B1 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.63□□□□□ -1.191e-10■□□□□ 10.2
FTOQ9C0B1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.87■■□□□ 1.256e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-208ENST00000483409 570 ntTSL 415.08■□□□□ 06e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC9.2□□□□□ -0.946e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.84□□□□□ -0.996e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.35□□□□□ -1.076e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.146e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.9□□□□□ -1.476e-16■□□□□ 10.2
FTOQ9C0B1 SSR1-209ENST00000488834 585 ntTSL 43.9□□□□□ -1.796e-16■□□□□ 10.2
FTOQ9C0B1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.882e-6■□□□□ 10.1
FTOQ9C0B1 SMARCC1-202ENST00000425518 3827 ntTSL 28.88□□□□□ -0.992e-6■□□□□ 10.1
FTOQ9C0B1 PRKCSH-208ENST00000589126 625 ntTSL 515.4■□□□□ 0.062e-6■□□□□ 10.1
FTOQ9C0B1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.923e-11■□□□□ 10.1
FTOQ9C0B1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.923e-11■□□□□ 10.1
FTOQ9C0B1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.76■■□□□ 1.713e-11■□□□□ 10.1
FTOQ9C0B1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.67■□□□□ 0.423e-11■□□□□ 10.1
FTOQ9C0B1 AC009163.4-203ENST00000566594 254 ntTSL 214.61□□□□□ -0.073e-11■□□□□ 10.1
FTOQ9C0B1 AC009163.4-202ENST00000561887 137 ntTSL 214.61□□□□□ -0.073e-11■□□□□ 10.1
FTOQ9C0B1 TMEM170A-205ENST00000568559 4345 ntTSL 1 (best)13.82□□□□□ -0.23e-11■□□□□ 10.1
FTOQ9C0B1 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC13.66□□□□□ -0.223e-11■□□□□ 10.1
FTOQ9C0B1 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC10.86□□□□□ -0.673e-11■□□□□ 10.1
FTOQ9C0B1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.192e-10■□□□□ 10.1
FTOQ9C0B1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.742e-10■□□□□ 10.1
FTOQ9C0B1 AP3D1-210ENST00000591631 796 ntTSL 518.65■□□□□ 0.582e-10■□□□□ 10.1
FTOQ9C0B1 RABL6-205ENST00000435930 3328 ntTSL 217.37■□□□□ 0.372e-10■□□□□ 10.1
FTOQ9C0B1 APP-215ENST00000474136 1309 ntTSL 1 (best)23.85■■□□□ 1.414e-6■□□□□ 10.1
FTOQ9C0B1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.45e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.395e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.38■■■□□ 2.295e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.275e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-220ENST00000519767 970 ntTSL 1 (best)29.22■■■□□ 2.275e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.9■■■□□ 2.225e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 25e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.11■■□□□ 1.455e-19■□□□□ 10.1
FTOQ9C0B1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.1■□□□□ 0.975e-19■□□□□ 10.1
FTOQ9C0B1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.81■■■□□ 2.685e-11■□□□□ 10.1
FTOQ9C0B1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.965e-11■□□□□ 10.1
FTOQ9C0B1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.11■■□□□ 1.295e-11■□□□□ 10.1
FTOQ9C0B1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.34■□□□□ 0.855e-11■□□□□ 10.1
FTOQ9C0B1 MAZ-209ENST00000565777 1313 ntTSL 218.83■□□□□ 0.615e-11■□□□□ 10.1
FTOQ9C0B1 MAZ-213ENST00000568411 599 ntTSL 318.35■□□□□ 0.535e-11■□□□□ 10.1
FTOQ9C0B1 NAP1L1-222ENST00000551992 1074 ntTSL 527.37■■□□□ 1.973e-7■□□□□ 10.1
FTOQ9C0B1 NAP1L1-212ENST00000547993 2481 ntTSL 1 (best)6.39□□□□□ -1.393e-7■□□□□ 10.1
FTOQ9C0B1 NAP1L1-208ENST00000547529 892 ntTSL 54.16□□□□□ -1.743e-7■□□□□ 10.1
FTOQ9C0B1 NAP1L1-225ENST00000552147 1009 ntTSL 54.11□□□□□ -1.753e-7■□□□□ 10.1
FTOQ9C0B1 NAP1L1-224ENST00000552056 1981 ntTSL 54□□□□□ -1.773e-7■□□□□ 10.1
FTOQ9C0B1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.372e-10■□□□□ 10.1
FTOQ9C0B1 LAPTM4B-202ENST00000517924 618 ntTSL 528.21■■■□□ 2.112e-10■□□□□ 10.1
FTOQ9C0B1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.69■■□□□ 1.222e-10■□□□□ 10.1
FTOQ9C0B1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.84■□□□□ 0.772e-10■□□□□ 10.1
FTOQ9C0B1 GPT2-204ENST00000562801 2092 ntTSL 217.73■□□□□ 0.432e-18■□□□□ 10.1
FTOQ9C0B1 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC14.42□□□□□ -0.12e-18■□□□□ 10.1
FTOQ9C0B1 PAIP2-206ENST00000510409 815 ntTSL 222.62■■□□□ 1.216e-7■□□□□ 10.1
FTOQ9C0B1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.58■■□□□ 1.216e-7■□□□□ 10.1
FTOQ9C0B1 PAIP2-204ENST00000507755 776 ntTSL 520.59■□□□□ 0.896e-7■□□□□ 10.1
FTOQ9C0B1 PAIP2-207ENST00000511381 365 ntTSL 518.82■□□□□ 0.66e-7■□□□□ 10.1
Retrieved 100 of 7,068 protein–RNA pairs in 369.4 ms