RNA–Protein interactions for RNA: ENST00000566980.1

TMEM170A-203, Transcript of transmembrane protein 170A, humanhuman

TSL 5 BASIC

Gene TMEM170A, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-203ENST00000566980 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
TMEM170A-203ENST00000566980 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
TMEM170A-203ENST00000566980 ABCC9O60706 1549 aa33.98■■■■□ 3.03
TMEM170A-203ENST00000566980 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
TMEM170A-203ENST00000566980 NACADO15069 1562 aa32.35■■■□□ 2.77
TMEM170A-203ENST00000566980 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
TMEM170A-203ENST00000566980 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
TMEM170A-203ENST00000566980 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
TMEM170A-203ENST00000566980 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
TMEM170A-203ENST00000566980 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
TMEM170A-203ENST00000566980 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
TMEM170A-203ENST00000566980 PABPN1Q86U42 306 aaKnown RBP eCLIP31.66■■■□□ 2.66
TMEM170A-203ENST00000566980 BICRAQ9NZM4 1560 aa31.58■■■□□ 2.65
TMEM170A-203ENST00000566980 SHROOM4Q9ULL8 1493 aa31.19■■■□□ 2.58
TMEM170A-203ENST00000566980 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
TMEM170A-203ENST00000566980 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
TMEM170A-203ENST00000566980 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
TMEM170A-203ENST00000566980 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
TMEM170A-203ENST00000566980 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
TMEM170A-203ENST00000566980 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
TMEM170A-203ENST00000566980 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
TMEM170A-203ENST00000566980 SMARCA2P51531 1590 aa29.72■■■□□ 2.35
TMEM170A-203ENST00000566980 BAZ1AQ9NRL2 1556 aaPredicted RBP29.71■■■□□ 2.35
TMEM170A-203ENST00000566980 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
TMEM170A-203ENST00000566980 PEG3Q9GZU2 1588 aa29.58■■■□□ 2.33
TMEM170A-203ENST00000566980 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
TMEM170A-203ENST00000566980 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
TMEM170A-203ENST00000566980 NESP48681 1621 aa29.28■■■□□ 2.28
TMEM170A-203ENST00000566980 ERCC6Q03468 1493 aa29.28■■■□□ 2.28
TMEM170A-203ENST00000566980 CUX2O14529 1486 aa29.22■■■□□ 2.27
TMEM170A-203ENST00000566980 WIZO95785 1651 aa29.15■■■□□ 2.26
TMEM170A-203ENST00000566980 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
TMEM170A-203ENST00000566980 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.23
TMEM170A-203ENST00000566980 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
TMEM170A-203ENST00000566980 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
TMEM170A-203ENST00000566980 PDS5BQ9NTI5 1447 aa28.94■■■□□ 2.22
TMEM170A-203ENST00000566980 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
TMEM170A-203ENST00000566980 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
TMEM170A-203ENST00000566980 TOP2AP11388 1531 aaKnown RBP28.82■■■□□ 2.2
TMEM170A-203ENST00000566980 CFTRP13569 1480 aa28.7■■■□□ 2.18
TMEM170A-203ENST00000566980 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
TMEM170A-203ENST00000566980 WDR62O43379 1518 aa28.63■■■□□ 2.17
TMEM170A-203ENST00000566980 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
TMEM170A-203ENST00000566980 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
TMEM170A-203ENST00000566980 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
TMEM170A-203ENST00000566980 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
TMEM170A-203ENST00000566980 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
TMEM170A-203ENST00000566980 TOPBP1Q92547 1522 aa28.1■■■□□ 2.09
TMEM170A-203ENST00000566980 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
TMEM170A-203ENST00000566980 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
TMEM170A-203ENST00000566980 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
TMEM170A-203ENST00000566980 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
TMEM170A-203ENST00000566980 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
TMEM170A-203ENST00000566980 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
TMEM170A-203ENST00000566980 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
TMEM170A-203ENST00000566980 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
TMEM170A-203ENST00000566980 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
TMEM170A-203ENST00000566980 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.03
TMEM170A-203ENST00000566980 CUX1P39880 1505 aa27.72■■■□□ 2.03
TMEM170A-203ENST00000566980 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.03
TMEM170A-203ENST00000566980 SOGA1O94964 1423 aa27.69■■■□□ 2.02
TMEM170A-203ENST00000566980 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
TMEM170A-203ENST00000566980 TRIM41Q8WV44 630 aa27.65■■■□□ 2.02
TMEM170A-203ENST00000566980 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
TMEM170A-203ENST00000566980 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
TMEM170A-203ENST00000566980 CHD1O14646 1710 aa27.56■■■□□ 2
TMEM170A-203ENST00000566980 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
TMEM170A-203ENST00000566980 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
TMEM170A-203ENST00000566980 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
TMEM170A-203ENST00000566980 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
TMEM170A-203ENST00000566980 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
TMEM170A-203ENST00000566980 GRIN2BQ13224 1484 aa27.44■■□□□ 1.98
TMEM170A-203ENST00000566980 FBLN2P98095 1184 aa27.42■■□□□ 1.98
TMEM170A-203ENST00000566980 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
TMEM170A-203ENST00000566980 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
TMEM170A-203ENST00000566980 GAPVD1Q14C86 1478 aa27.37■■□□□ 1.97
TMEM170A-203ENST00000566980 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
TMEM170A-203ENST00000566980 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
TMEM170A-203ENST00000566980 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
TMEM170A-203ENST00000566980 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
TMEM170A-203ENST00000566980 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.96
TMEM170A-203ENST00000566980 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
TMEM170A-203ENST00000566980 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
TMEM170A-203ENST00000566980 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
TMEM170A-203ENST00000566980 CLASP1Q7Z460 1538 aa27.3■■□□□ 1.96
TMEM170A-203ENST00000566980 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
TMEM170A-203ENST00000566980 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.94
TMEM170A-203ENST00000566980 ADAMTS12P58397 1594 aa27.1■■□□□ 1.93
TMEM170A-203ENST00000566980 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
TMEM170A-203ENST00000566980 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
TMEM170A-203ENST00000566980 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
TMEM170A-203ENST00000566980 NUP160Q12769 1436 aa27.02■■□□□ 1.92
TMEM170A-203ENST00000566980 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
TMEM170A-203ENST00000566980 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
TMEM170A-203ENST00000566980 ERCC6L2Q5T890 1561 aa26.87■■□□□ 1.89
TMEM170A-203ENST00000566980 IGF1RP08069 1367 aa26.79■■□□□ 1.88
TMEM170A-203ENST00000566980 KIF27Q86VH2 1401 aa26.79■■□□□ 1.88
TMEM170A-203ENST00000566980 TRHP20396 242 aaPredicted RBP26.77■■□□□ 1.88
TMEM170A-203ENST00000566980 RUSC2Q8N2Y8 1516 aa26.71■■□□□ 1.87
TMEM170A-203ENST00000566980 CUL7Q14999 1698 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms