RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
TMEM170A-201ENST00000357613 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
TMEM170A-201ENST00000357613 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
TMEM170A-201ENST00000357613 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
TMEM170A-201ENST00000357613 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
TMEM170A-201ENST00000357613 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
TMEM170A-201ENST00000357613 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
TMEM170A-201ENST00000357613 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
TMEM170A-201ENST00000357613 APLP2Q06481 763 aa19.31■□□□□ 0.68
TMEM170A-201ENST00000357613 ABCC9O60706 1549 aa19.26■□□□□ 0.67
TMEM170A-201ENST00000357613 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
TMEM170A-201ENST00000357613 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
TMEM170A-201ENST00000357613 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
TMEM170A-201ENST00000357613 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
TMEM170A-201ENST00000357613 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
TMEM170A-201ENST00000357613 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
TMEM170A-201ENST00000357613 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
TMEM170A-201ENST00000357613 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.57
TMEM170A-201ENST00000357613 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
TMEM170A-201ENST00000357613 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.55
TMEM170A-201ENST00000357613 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
TMEM170A-201ENST00000357613 YTHDC1Q96MU7 727 aaKnown RBP18.42■□□□□ 0.54
TMEM170A-201ENST00000357613 ITGAEP38570 1179 aa18.4■□□□□ 0.54
TMEM170A-201ENST00000357613 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
TMEM170A-201ENST00000357613 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.52
TMEM170A-201ENST00000357613 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
TMEM170A-201ENST00000357613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
TMEM170A-201ENST00000357613 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
TMEM170A-201ENST00000357613 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
TMEM170A-201ENST00000357613 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
TMEM170A-201ENST00000357613 NACADO15069 1562 aa18.22■□□□□ 0.51
TMEM170A-201ENST00000357613 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
TMEM170A-201ENST00000357613 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
TMEM170A-201ENST00000357613 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.5
TMEM170A-201ENST00000357613 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
TMEM170A-201ENST00000357613 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
TMEM170A-201ENST00000357613 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
TMEM170A-201ENST00000357613 HRCP23327 699 aa18.01■□□□□ 0.47
TMEM170A-201ENST00000357613 NEFLP07196 543 aa18■□□□□ 0.47
TMEM170A-201ENST00000357613 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
TMEM170A-201ENST00000357613 FAM50AQ14320 339 aaKnown RBP17.79■□□□□ 0.44
TMEM170A-201ENST00000357613 FBLN2P98095 1184 aa17.71■□□□□ 0.43
TMEM170A-201ENST00000357613 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
TMEM170A-201ENST00000357613 ARID3CA6NKF2 412 aa17.67■□□□□ 0.42
TMEM170A-201ENST00000357613 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
TMEM170A-201ENST00000357613 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
TMEM170A-201ENST00000357613 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
TMEM170A-201ENST00000357613 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
TMEM170A-201ENST00000357613 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
TMEM170A-201ENST00000357613 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
TMEM170A-201ENST00000357613 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
TMEM170A-201ENST00000357613 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
TMEM170A-201ENST00000357613 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
TMEM170A-201ENST00000357613 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.38
TMEM170A-201ENST00000357613 BCANQ96GW7 911 aa17.37■□□□□ 0.37
TMEM170A-201ENST00000357613 ZNF777Q9ULD5 760 aaPredicted RBP17.33■□□□□ 0.37
TMEM170A-201ENST00000357613 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
TMEM170A-201ENST00000357613 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
TMEM170A-201ENST00000357613 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
TMEM170A-201ENST00000357613 MYT1Q01538 1121 aa17.24■□□□□ 0.35
TMEM170A-201ENST00000357613 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
TMEM170A-201ENST00000357613 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
TMEM170A-201ENST00000357613 ANP32CO43423 234 aa17.18■□□□□ 0.34
TMEM170A-201ENST00000357613 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
TMEM170A-201ENST00000357613 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
TMEM170A-201ENST00000357613 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
TMEM170A-201ENST00000357613 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
TMEM170A-201ENST00000357613 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
TMEM170A-201ENST00000357613 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
TMEM170A-201ENST00000357613 WIZO95785 1651 aa17.08■□□□□ 0.32
TMEM170A-201ENST00000357613 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
TMEM170A-201ENST00000357613 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
TMEM170A-201ENST00000357613 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
TMEM170A-201ENST00000357613 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
TMEM170A-201ENST00000357613 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
TMEM170A-201ENST00000357613 CDK11AQ9UQ88 783 aaPredicted RBP17■□□□□ 0.31
TMEM170A-201ENST00000357613 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
TMEM170A-201ENST00000357613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM170A-201ENST00000357613 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
TMEM170A-201ENST00000357613 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
TMEM170A-201ENST00000357613 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
TMEM170A-201ENST00000357613 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
TMEM170A-201ENST00000357613 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
TMEM170A-201ENST00000357613 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
TMEM170A-201ENST00000357613 HIRIP3Q9BW71 556 aaPredicted RBP16.91■□□□□ 0.3
TMEM170A-201ENST00000357613 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
TMEM170A-201ENST00000357613 TONSLQ96HA7 1378 aa16.88■□□□□ 0.29
TMEM170A-201ENST00000357613 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
TMEM170A-201ENST00000357613 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
TMEM170A-201ENST00000357613 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
TMEM170A-201ENST00000357613 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
TMEM170A-201ENST00000357613 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
TMEM170A-201ENST00000357613 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
TMEM170A-201ENST00000357613 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.29
TMEM170A-201ENST00000357613 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.29
TMEM170A-201ENST00000357613 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.29
TMEM170A-201ENST00000357613 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
TMEM170A-201ENST00000357613 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
TMEM170A-201ENST00000357613 NEFMP07197 916 aa16.81■□□□□ 0.28
TMEM170A-201ENST00000357613 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms