RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 NISCHQ9Y2I1 1504 aa33.35■■■□□ 2.93
PRKCSH-208ENST00000589126 CCDC180Q9P1Z9 1646 aa29.72■■■□□ 2.35
PRKCSH-208ENST00000589126 ABCC9O60706 1549 aa29.35■■■□□ 2.29
PRKCSH-208ENST00000589126 RB1CC1Q8TDY2 1594 aa28.08■■■□□ 2.09
PRKCSH-208ENST00000589126 NACADO15069 1562 aa28■■■□□ 2.07
PRKCSH-208ENST00000589126 DCAF8L2P0C7V8 631 aa27.94■■■□□ 2.06
PRKCSH-208ENST00000589126 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
PRKCSH-208ENST00000589126 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
PRKCSH-208ENST00000589126 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
PRKCSH-208ENST00000589126 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
PRKCSH-208ENST00000589126 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
PRKCSH-208ENST00000589126 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
PRKCSH-208ENST00000589126 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
PRKCSH-208ENST00000589126 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
PRKCSH-208ENST00000589126 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
PRKCSH-208ENST00000589126 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
PRKCSH-208ENST00000589126 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
PRKCSH-208ENST00000589126 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
PRKCSH-208ENST00000589126 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
PRKCSH-208ENST00000589126 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
PRKCSH-208ENST00000589126 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
PRKCSH-208ENST00000589126 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
PRKCSH-208ENST00000589126 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
PRKCSH-208ENST00000589126 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
PRKCSH-208ENST00000589126 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
PRKCSH-208ENST00000589126 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
PRKCSH-208ENST00000589126 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
PRKCSH-208ENST00000589126 WIZO95785 1651 aa25.43■■□□□ 1.66
PRKCSH-208ENST00000589126 NESP48681 1621 aa25.36■■□□□ 1.65
PRKCSH-208ENST00000589126 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
PRKCSH-208ENST00000589126 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
PRKCSH-208ENST00000589126 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
PRKCSH-208ENST00000589126 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
PRKCSH-208ENST00000589126 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
PRKCSH-208ENST00000589126 CUX2O14529 1486 aa25.09■■□□□ 1.61
PRKCSH-208ENST00000589126 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
PRKCSH-208ENST00000589126 PDS5BQ9NTI5 1447 aa25.02■■□□□ 1.6
PRKCSH-208ENST00000589126 THOC2Q8NI27 1593 aaKnown RBP25■■□□□ 1.59
PRKCSH-208ENST00000589126 CFTRP13569 1480 aa24.9■■□□□ 1.58
PRKCSH-208ENST00000589126 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
PRKCSH-208ENST00000589126 FANCD2Q9BXW9 1451 aa24.8■■□□□ 1.56
PRKCSH-208ENST00000589126 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
PRKCSH-208ENST00000589126 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
PRKCSH-208ENST00000589126 WDR62O43379 1518 aa24.74■■□□□ 1.55
PRKCSH-208ENST00000589126 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
PRKCSH-208ENST00000589126 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
PRKCSH-208ENST00000589126 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
PRKCSH-208ENST00000589126 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
PRKCSH-208ENST00000589126 TOPBP1Q92547 1522 aa24.39■■□□□ 1.49
PRKCSH-208ENST00000589126 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.48
PRKCSH-208ENST00000589126 ABCC8Q09428 1581 aa24.32■■□□□ 1.48
PRKCSH-208ENST00000589126 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
PRKCSH-208ENST00000589126 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
PRKCSH-208ENST00000589126 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
PRKCSH-208ENST00000589126 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
PRKCSH-208ENST00000589126 CUX1P39880 1505 aa24.14■■□□□ 1.45
PRKCSH-208ENST00000589126 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
PRKCSH-208ENST00000589126 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
PRKCSH-208ENST00000589126 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
PRKCSH-208ENST00000589126 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.449e-8■■■■■ 30.5
PRKCSH-208ENST00000589126 SOGA1O94964 1423 aa24.05■■□□□ 1.44
PRKCSH-208ENST00000589126 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
PRKCSH-208ENST00000589126 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
PRKCSH-208ENST00000589126 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
PRKCSH-208ENST00000589126 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
PRKCSH-208ENST00000589126 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
PRKCSH-208ENST00000589126 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
PRKCSH-208ENST00000589126 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
PRKCSH-208ENST00000589126 CHD1O14646 1710 aa23.84■■□□□ 1.41
PRKCSH-208ENST00000589126 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
PRKCSH-208ENST00000589126 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
PRKCSH-208ENST00000589126 GRIN2BQ13224 1484 aa23.79■■□□□ 1.4
PRKCSH-208ENST00000589126 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
PRKCSH-208ENST00000589126 FBLN2P98095 1184 aa23.77■■□□□ 1.4
PRKCSH-208ENST00000589126 ABCA5Q8WWZ7 1642 aa23.76■■□□□ 1.39
PRKCSH-208ENST00000589126 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
PRKCSH-208ENST00000589126 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
PRKCSH-208ENST00000589126 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
PRKCSH-208ENST00000589126 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
PRKCSH-208ENST00000589126 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
PRKCSH-208ENST00000589126 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
PRKCSH-208ENST00000589126 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
PRKCSH-208ENST00000589126 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
PRKCSH-208ENST00000589126 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
PRKCSH-208ENST00000589126 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
PRKCSH-208ENST00000589126 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
PRKCSH-208ENST00000589126 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
PRKCSH-208ENST00000589126 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
PRKCSH-208ENST00000589126 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
PRKCSH-208ENST00000589126 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
PRKCSH-208ENST00000589126 CYB5RLQ6IPT4 315 aa23.44■■□□□ 1.34
PRKCSH-208ENST00000589126 NUP160Q12769 1436 aa23.42■■□□□ 1.34
PRKCSH-208ENST00000589126 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
PRKCSH-208ENST00000589126 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
PRKCSH-208ENST00000589126 IGF1RP08069 1367 aa23.34■■□□□ 1.33
PRKCSH-208ENST00000589126 ERCC6L2Q5T890 1561 aa23.28■■□□□ 1.32
PRKCSH-208ENST00000589126 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
PRKCSH-208ENST00000589126 CUL7Q14999 1698 aa23.25■■□□□ 1.31
PRKCSH-208ENST00000589126 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
PRKCSH-208ENST00000589126 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms