RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
CCNDBP1-203ENST00000562553 CCDC180Q9P1Z9 1646 aa33.49■■■□□ 2.95
CCNDBP1-203ENST00000562553 ABCC9O60706 1549 aa32.98■■■□□ 2.87
CCNDBP1-203ENST00000562553 RB1CC1Q8TDY2 1594 aa31.52■■■□□ 2.64
CCNDBP1-203ENST00000562553 NACADO15069 1562 aa31.46■■■□□ 2.63
CCNDBP1-203ENST00000562553 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
CCNDBP1-203ENST00000562553 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
CCNDBP1-203ENST00000562553 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
CCNDBP1-203ENST00000562553 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
CCNDBP1-203ENST00000562553 UNC13AQ9UPW8 1703 aa30.93■■■□□ 2.54
CCNDBP1-203ENST00000562553 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
CCNDBP1-203ENST00000562553 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
CCNDBP1-203ENST00000562553 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
CCNDBP1-203ENST00000562553 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
CCNDBP1-203ENST00000562553 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.44
CCNDBP1-203ENST00000562553 CC2D2AQ9P2K1 1620 aa29.86■■■□□ 2.37
CCNDBP1-203ENST00000562553 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
CCNDBP1-203ENST00000562553 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
CCNDBP1-203ENST00000562553 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
CCNDBP1-203ENST00000562553 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
CCNDBP1-203ENST00000562553 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
CCNDBP1-203ENST00000562553 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
CCNDBP1-203ENST00000562553 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
CCNDBP1-203ENST00000562553 SMARCA2P51531 1590 aa29■■■□□ 2.23
CCNDBP1-203ENST00000562553 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
CCNDBP1-203ENST00000562553 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
CCNDBP1-203ENST00000562553 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
CCNDBP1-203ENST00000562553 WIZO95785 1651 aa28.73■■■□□ 2.19
CCNDBP1-203ENST00000562553 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
CCNDBP1-203ENST00000562553 CUX2O14529 1486 aa28.48■■■□□ 2.15
CCNDBP1-203ENST00000562553 ERCC6Q03468 1493 aa28.47■■■□□ 2.15
CCNDBP1-203ENST00000562553 NESP48681 1621 aa28.43■■■□□ 2.14
CCNDBP1-203ENST00000562553 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
CCNDBP1-203ENST00000562553 DNAJC5Q9H3Z4 198 aa28.36■■■□□ 2.13
CCNDBP1-203ENST00000562553 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
CCNDBP1-203ENST00000562553 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
CCNDBP1-203ENST00000562553 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
CCNDBP1-203ENST00000562553 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
CCNDBP1-203ENST00000562553 PDS5BQ9NTI5 1447 aa28.08■■■□□ 2.09
CCNDBP1-203ENST00000562553 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
CCNDBP1-203ENST00000562553 CFTRP13569 1480 aa28.01■■■□□ 2.07
CCNDBP1-203ENST00000562553 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
CCNDBP1-203ENST00000562553 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
CCNDBP1-203ENST00000562553 CEP164Q9UPV0 1460 aa27.84■■■□□ 2.05
CCNDBP1-203ENST00000562553 SUPT5HO00267 1087 aaKnown RBP27.84■■■□□ 2.05
CCNDBP1-203ENST00000562553 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.04
CCNDBP1-203ENST00000562553 WDR62O43379 1518 aa27.77■■■□□ 2.04
CCNDBP1-203ENST00000562553 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
CCNDBP1-203ENST00000562553 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
CCNDBP1-203ENST00000562553 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
CCNDBP1-203ENST00000562553 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
CCNDBP1-203ENST00000562553 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
CCNDBP1-203ENST00000562553 CUX1P39880 1505 aa27.23■■□□□ 1.95
CCNDBP1-203ENST00000562553 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.95
CCNDBP1-203ENST00000562553 ZNF608Q9ULD9 1512 aaPredicted RBP27.19■■□□□ 1.94
CCNDBP1-203ENST00000562553 OSCARQ8IYS5 282 aa27.17■■□□□ 1.94
CCNDBP1-203ENST00000562553 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
CCNDBP1-203ENST00000562553 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
CCNDBP1-203ENST00000562553 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
CCNDBP1-203ENST00000562553 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
CCNDBP1-203ENST00000562553 SOGA1O94964 1423 aa27.06■■□□□ 1.92
CCNDBP1-203ENST00000562553 TRIM41Q8WV44 630 aa27.03■■□□□ 1.92
CCNDBP1-203ENST00000562553 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.917e-9■■■□□ 16.4
CCNDBP1-203ENST00000562553 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
CCNDBP1-203ENST00000562553 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
CCNDBP1-203ENST00000562553 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
CCNDBP1-203ENST00000562553 WDR97A6NE52 1622 aa26.96■■□□□ 1.91
CCNDBP1-203ENST00000562553 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
CCNDBP1-203ENST00000562553 TDRD9Q8NDG6 1382 aaKnown RBP26.93■■□□□ 1.9
CCNDBP1-203ENST00000562553 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
CCNDBP1-203ENST00000562553 RIMBP3CA6NJZ7 1639 aa26.8■■□□□ 1.88
CCNDBP1-203ENST00000562553 RIMBP3BA6NNM3 1639 aa26.8■■□□□ 1.88
CCNDBP1-203ENST00000562553 RIMBP3Q9UFD9 1639 aa26.8■■□□□ 1.88
CCNDBP1-203ENST00000562553 CHD1O14646 1710 aa26.79■■□□□ 1.88
CCNDBP1-203ENST00000562553 ABCA5Q8WWZ7 1642 aa26.79■■□□□ 1.88
CCNDBP1-203ENST00000562553 PBRM1Q86U86 1689 aa26.77■■□□□ 1.88
CCNDBP1-203ENST00000562553 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
CCNDBP1-203ENST00000562553 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
CCNDBP1-203ENST00000562553 GAPVD1Q14C86 1478 aa26.75■■□□□ 1.87
CCNDBP1-203ENST00000562553 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
CCNDBP1-203ENST00000562553 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
CCNDBP1-203ENST00000562553 FBLN2P98095 1184 aa26.65■■□□□ 1.86
CCNDBP1-203ENST00000562553 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
CCNDBP1-203ENST00000562553 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
CCNDBP1-203ENST00000562553 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
CCNDBP1-203ENST00000562553 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
CCNDBP1-203ENST00000562553 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
CCNDBP1-203ENST00000562553 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
CCNDBP1-203ENST00000562553 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
CCNDBP1-203ENST00000562553 FHAD1B1AJZ9 1412 aa26.43■■□□□ 1.82
CCNDBP1-203ENST00000562553 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
CCNDBP1-203ENST00000562553 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
CCNDBP1-203ENST00000562553 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
CCNDBP1-203ENST00000562553 IGF1RP08069 1367 aa26.32■■□□□ 1.8
CCNDBP1-203ENST00000562553 NUP160Q12769 1436 aa26.31■■□□□ 1.8
CCNDBP1-203ENST00000562553 CUL7Q14999 1698 aa26.28■■□□□ 1.8
CCNDBP1-203ENST00000562553 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
CCNDBP1-203ENST00000562553 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
CCNDBP1-203ENST00000562553 SHROOM2Q13796 1616 aa26.15■■□□□ 1.78
CCNDBP1-203ENST00000562553 ERCC6L2Q5T890 1561 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms