Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.52■■■□□ 2
KDM4CQ9H3R0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.52■■■□□ 2
KDM4CQ9H3R0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
KDM4CQ9H3R0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.51■■□□□ 1.99
KDM4CQ9H3R0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
KDM4CQ9H3R0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
KDM4CQ9H3R0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
KDM4CQ9H3R0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.49■■□□□ 1.99
KDM4CQ9H3R0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM4CQ9H3R0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.46■■□□□ 1.99
KDM4CQ9H3R0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
KDM4CQ9H3R0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
KDM4CQ9H3R0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
KDM4CQ9H3R0 MIR3665-201ENST00000578708 105 ntBASIC27.45■■□□□ 1.98
KDM4CQ9H3R0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
KDM4CQ9H3R0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
KDM4CQ9H3R0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.44■■□□□ 1.98
KDM4CQ9H3R0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KDM4CQ9H3R0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KDM4CQ9H3R0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.42■■□□□ 1.98
KDM4CQ9H3R0 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.42■■□□□ 1.98
KDM4CQ9H3R0 WASH5P-204ENST00000632292 975 ntBASIC27.41■■□□□ 1.98
KDM4CQ9H3R0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
KDM4CQ9H3R0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
KDM4CQ9H3R0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.4■■□□□ 1.98
KDM4CQ9H3R0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
KDM4CQ9H3R0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
KDM4CQ9H3R0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 MIR762-201ENST00000390236 83 ntBASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
KDM4CQ9H3R0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM4CQ9H3R0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM4CQ9H3R0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.34■■□□□ 1.97
KDM4CQ9H3R0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.33■■□□□ 1.97
KDM4CQ9H3R0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM4CQ9H3R0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM4CQ9H3R0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM4CQ9H3R0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM4CQ9H3R0 AC005559.1-201ENST00000589661 871 ntBASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 DUX4L28-201ENST00000623687 678 ntBASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.28■■□□□ 1.96
KDM4CQ9H3R0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.27■■□□□ 1.96
KDM4CQ9H3R0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM4CQ9H3R0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM4CQ9H3R0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 AC087741.3-201ENST00000624270 1347 ntBASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM4CQ9H3R0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM4CQ9H3R0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
KDM4CQ9H3R0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.22■■□□□ 1.95
KDM4CQ9H3R0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.21■■□□□ 1.95
KDM4CQ9H3R0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
KDM4CQ9H3R0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.21■■□□□ 1.95
KDM4CQ9H3R0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.2■■□□□ 1.94
KDM4CQ9H3R0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
KDM4CQ9H3R0 AC044849.2-201ENST00000606596 710 ntBASIC27.19■■□□□ 1.94
KDM4CQ9H3R0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
KDM4CQ9H3R0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KDM4CQ9H3R0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KDM4CQ9H3R0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KDM4CQ9H3R0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KDM4CQ9H3R0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.94
KDM4CQ9H3R0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KDM4CQ9H3R0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms