Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
DDX11Q96FC9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DDX11Q96FC9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.56■■■□□ 2.64
DDX11Q96FC9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.55■■■□□ 2.64
DDX11Q96FC9 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.55■■■□□ 2.64
DDX11Q96FC9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
DDX11Q96FC9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
DDX11Q96FC9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
DDX11Q96FC9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.53■■■□□ 2.64
DDX11Q96FC9 MIR762-201ENST00000390236 83 ntBASIC31.53■■■□□ 2.64
DDX11Q96FC9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
DDX11Q96FC9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.53■■■□□ 2.64
DDX11Q96FC9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
DDX11Q96FC9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.51■■■□□ 2.63
DDX11Q96FC9 ABCB10P1-201ENST00000614297 2181 ntBASIC31.51■■■□□ 2.63
DDX11Q96FC9 AL161658.1-201ENST00000623641 1967 ntBASIC31.49■■■□□ 2.63
DDX11Q96FC9 DUX4L28-201ENST00000623687 678 ntBASIC31.49■■■□□ 2.63
DDX11Q96FC9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
DDX11Q96FC9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX11Q96FC9 AC087741.3-201ENST00000624270 1347 ntBASIC31.47■■■□□ 2.63
DDX11Q96FC9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.46■■■□□ 2.63
DDX11Q96FC9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX11Q96FC9 AC005559.1-201ENST00000589661 871 ntBASIC31.45■■■□□ 2.63
DDX11Q96FC9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
DDX11Q96FC9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
DDX11Q96FC9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.44■■■□□ 2.62
DDX11Q96FC9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
DDX11Q96FC9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.44■■■□□ 2.62
DDX11Q96FC9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
DDX11Q96FC9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.43■■■□□ 2.62
DDX11Q96FC9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.41■■■□□ 2.62
DDX11Q96FC9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
DDX11Q96FC9 WASH5P-204ENST00000632292 975 ntBASIC31.39■■■□□ 2.62
DDX11Q96FC9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX11Q96FC9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX11Q96FC9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.37■■■□□ 2.61
DDX11Q96FC9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.37■■■□□ 2.61
DDX11Q96FC9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
DDX11Q96FC9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.37■■■□□ 2.61
DDX11Q96FC9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX11Q96FC9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX11Q96FC9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
DDX11Q96FC9 AC044849.2-201ENST00000606596 710 ntBASIC31.35■■■□□ 2.61
DDX11Q96FC9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX11Q96FC9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX11Q96FC9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
DDX11Q96FC9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
DDX11Q96FC9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.32■■■□□ 2.6
DDX11Q96FC9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
DDX11Q96FC9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX11Q96FC9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
DDX11Q96FC9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX11Q96FC9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
DDX11Q96FC9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.29■■■□□ 2.6
DDX11Q96FC9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
DDX11Q96FC9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX11Q96FC9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
DDX11Q96FC9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
DDX11Q96FC9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
DDX11Q96FC9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
DDX11Q96FC9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
DDX11Q96FC9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
DDX11Q96FC9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.27■■■□□ 2.6
DDX11Q96FC9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.27■■■□□ 2.6
DDX11Q96FC9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
DDX11Q96FC9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
DDX11Q96FC9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
DDX11Q96FC9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
DDX11Q96FC9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DDX11Q96FC9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 MIR7108-201ENST00000614319 87 ntBASIC31.24■■■□□ 2.59
DDX11Q96FC9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
DDX11Q96FC9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
DDX11Q96FC9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX11Q96FC9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
DDX11Q96FC9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
DDX11Q96FC9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
DDX11Q96FC9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.18■■■□□ 2.58
DDX11Q96FC9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.18■■■□□ 2.58
DDX11Q96FC9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
DDX11Q96FC9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
DDX11Q96FC9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
DDX11Q96FC9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
DDX11Q96FC9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.16■■■□□ 2.58
DDX11Q96FC9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
DDX11Q96FC9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DDX11Q96FC9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
DDX11Q96FC9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.14■■■□□ 2.58
DDX11Q96FC9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.57
DDX11Q96FC9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.13■■■□□ 2.57
DDX11Q96FC9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DDX11Q96FC9 ST7-AS1-201ENST00000456775 1889 ntBASIC31.12■■■□□ 2.57
DDX11Q96FC9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms