Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 SMG1P3-201ENST00000435197 416 ntTSL 313.58□□□□□ -0.247e-7■■■□□ 16.3
EWSR1Q01844 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.564e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.524e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.394e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-219ENST00000542099 1119 ntTSL 317.26■□□□□ 0.354e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.34e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)16.25■□□□□ 0.194e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.14e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.564e-6■■■□□ 16.3
EWSR1Q01844 ARL6IP4-206ENST00000413381 799 ntAPPRIS ALT2 TSL 510.22□□□□□ -0.774e-6■■■□□ 16.3
EWSR1Q01844 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC9.62□□□□□ -0.872e-6■■■□□ 16.3
EWSR1Q01844 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC9.62□□□□□ -0.872e-6■■■□□ 16.3
EWSR1Q01844 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC9.29□□□□□ -0.922e-6■■■□□ 16.3
EWSR1Q01844 CUX1-210ENST00000497815 947 ntTSL 29.12□□□□□ -0.952e-6■■■□□ 16.3
EWSR1Q01844 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC9.1□□□□□ -0.952e-6■■■□□ 16.3
EWSR1Q01844 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC8.94□□□□□ -0.982e-6■■■□□ 16.3
EWSR1Q01844 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.072e-6■■■□□ 16.3
EWSR1Q01844 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.01□□□□□ -1.132e-6■■■□□ 16.3
EWSR1Q01844 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.864e-8■■■□□ 16.3
EWSR1Q01844 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.548e-7■■■□□ 16.3
EWSR1Q01844 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.28e-7■■■□□ 16.3
EWSR1Q01844 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.218e-7■■■□□ 16.3
EWSR1Q01844 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.48e-7■■■□□ 16.3
EWSR1Q01844 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.812e-12■■■□□ 16.3
EWSR1Q01844 QSER1-203ENST00000527250 448 ntTSL 31.53□□□□□ -2.162e-12■■■□□ 16.3
EWSR1Q01844 SLC39A10-204ENST00000418005 563 ntTSL 416.77■□□□□ 0.282e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-208ENST00000464301 571 ntTSL 411.91□□□□□ -0.52e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-207ENST00000458054 593 ntTSL 46.82□□□□□ -1.322e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-203ENST00000412905 337 ntTSL 36.42□□□□□ -1.382e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-205ENST00000430412 4478 ntTSL 24.62□□□□□ -1.672e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-206ENST00000444421 544 ntTSL 43.29□□□□□ -1.882e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.942e-7■■■□□ 16.3
EWSR1Q01844 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.122e-7■■■□□ 16.3
EWSR1Q01844 BCR-207ENST00000463770 168 ntTSL 1 (best)11.26□□□□□ -0.619e-7■■■□□ 16.3
EWSR1Q01844 KCTD15-204ENST00000587658 632 ntTSL 317.63■□□□□ 0.411e-9■■■□□ 16.3
EWSR1Q01844 KCTD15-203ENST00000587559 622 ntTSL 411.45□□□□□ -0.581e-9■■■□□ 16.3
EWSR1Q01844 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.55□□□□□ -0.088e-8■■■□□ 16.3
EWSR1Q01844 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.05□□□□□ -0.168e-8■■■□□ 16.3
EWSR1Q01844 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC6.46□□□□□ -1.388e-8■■■□□ 16.3
EWSR1Q01844 TGIF1-214ENST00000549546 820 ntTSL 53.85□□□□□ -1.798e-8■■■□□ 16.3
EWSR1Q01844 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.23e-7■■■□□ 16.3
EWSR1Q01844 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.063e-7■■■□□ 16.3
EWSR1Q01844 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.883e-7■■■□□ 16.3
EWSR1Q01844 ARID1A-216ENST00000637465 699 ntTSL 53.73□□□□□ -1.813e-7■■■□□ 16.3
EWSR1Q01844 NECAB3-211ENST00000485399 1373 ntTSL 217.02■□□□□ 0.321e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-213ENST00000488489 2142 ntTSL 216.54■□□□□ 0.241e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.191e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.93■□□□□ 0.141e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-222ENST00000607805 969 ntTSL 515.68■□□□□ 0.11e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-215ENST00000494174 859 ntTSL 514.3□□□□□ -0.121e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-220ENST00000606699 1022 ntTSL 213.75□□□□□ -0.211e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-214ENST00000493590 625 ntTSL 512.56□□□□□ -0.41e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-219ENST00000606690 900 ntTSL 510.61□□□□□ -0.711e-6■■■□□ 16.2
EWSR1Q01844 NECAB3-203ENST00000439478 925 ntTSL 510.61□□□□□ -0.711e-6■■■□□ 16.2
EWSR1Q01844 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.49■□□□□ 0.551e-6■■■□□ 16.2
EWSR1Q01844 TPM4-208ENST00000588410 563 ntTSL 414.32□□□□□ -0.121e-6■■■□□ 16.2
EWSR1Q01844 TPM4-204ENST00000586499 708 ntTSL 413.99□□□□□ -0.171e-6■■■□□ 16.2
EWSR1Q01844 TPM4-206ENST00000587201 877 ntTSL 212.98□□□□□ -0.331e-6■■■□□ 16.2
EWSR1Q01844 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.691e-6■■■□□ 16.2
EWSR1Q01844 TPM4-205ENST00000586833 558 ntTSL 510.53□□□□□ -0.721e-6■■■□□ 16.2
EWSR1Q01844 TPM4-210ENST00000588507 367 ntTSL 35.34□□□□□ -1.551e-6■■■□□ 16.2
EWSR1Q01844 MICALL2-206ENST00000470807 668 ntTSL 312.49□□□□□ -0.413e-9■■■□□ 16.2
EWSR1Q01844 ACTB-211ENST00000480301 657 ntTSL 1 (best)15.33■□□□□ 0.046e-17■■■□□ 16.2
EWSR1Q01844 ACTB-210ENST00000477812 820 ntTSL 215.26■□□□□ 0.036e-17■■■□□ 16.2
EWSR1Q01844 ACTB-212ENST00000484841 1032 ntTSL 514.85□□□□□ -0.036e-17■■■□□ 16.2
EWSR1Q01844 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.046e-17■■■□□ 16.2
EWSR1Q01844 ACTB-207ENST00000462494 2245 ntTSL 514.51□□□□□ -0.096e-17■■■□□ 16.2
EWSR1Q01844 ACTB-204ENST00000425660 1845 ntTSL 1 (best)12.39□□□□□ -0.436e-17■■■□□ 16.2
EWSR1Q01844 ACTB-205ENST00000432588 568 ntTSL 411.97□□□□□ -0.496e-17■■■□□ 16.2
EWSR1Q01844 ACTB-206ENST00000443528 569 ntTSL 411.56□□□□□ -0.566e-17■■■□□ 16.2
EWSR1Q01844 ACTB-202ENST00000414620 561 ntTSL 411.51□□□□□ -0.576e-17■■■□□ 16.2
EWSR1Q01844 ACTB-209ENST00000473257 556 ntTSL 38.43□□□□□ -1.066e-17■■■□□ 16.2
EWSR1Q01844 AGAP3-219ENST00000485904 683 ntTSL 315.07■□□□□ 01e-6■■■□□ 16.2
EWSR1Q01844 MED15-222ENST00000473244 2733 ntTSL 1 (best)17.1■□□□□ 0.332e-9■■■□□ 16.2
EWSR1Q01844 MED15-231ENST00000493216 4701 ntTSL 214.73□□□□□ -0.052e-9■■■□□ 16.2
EWSR1Q01844 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.088e-7■■■□□ 16.2
EWSR1Q01844 CLPTM1L-207ENST00000506641 792 ntTSL 512.44□□□□□ -0.421e-6■■■□□ 16.2
EWSR1Q01844 CLPTM1L-208ENST00000507195 628 ntTSL 57.74□□□□□ -1.171e-6■■■□□ 16.2
EWSR1Q01844 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.071e-6■■■□□ 16.2
EWSR1Q01844 NUBP2-211ENST00000567700 2196 ntTSL 217.16■□□□□ 0.344e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-205ENST00000564227 903 ntTSL 316.46■□□□□ 0.234e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-215ENST00000568834 1173 ntTSL 215.44■□□□□ 0.064e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.084e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-212ENST00000568287 839 ntTSL 514.41□□□□□ -0.14e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.27□□□□□ -0.134e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-207ENST00000565603 995 ntTSL 314.25□□□□□ -0.134e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-202ENST00000562263 811 ntTSL 313.33□□□□□ -0.284e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-216ENST00000569898 582 ntTSL 312.95□□□□□ -0.344e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.76□□□□□ -0.374e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.64□□□□□ -0.554e-7■■■□□ 16.2
EWSR1Q01844 NUBP2-203ENST00000563136 470 ntTSL 411.03□□□□□ -0.644e-7■■■□□ 16.2
EWSR1Q01844 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.127e-8■■■□□ 16.1
EWSR1Q01844 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.047e-8■■■□□ 16.1
EWSR1Q01844 KMT5A-204ENST00000437519 1774 ntTSL 210.47□□□□□ -0.737e-8■■■□□ 16.1
EWSR1Q01844 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.023e-6■■■□□ 16.1
EWSR1Q01844 ZNF580-204ENST00000590190 335 ntTSL 314.09□□□□□ -0.153e-6■■■□□ 16.1
EWSR1Q01844 ZNF581-202ENST00000585995 591 ntTSL 313.93□□□□□ -0.183e-6■■■□□ 16.1
EWSR1Q01844 CCDC106-208ENST00000592996 741 ntTSL 313.64□□□□□ -0.233e-6■■■□□ 16.1
EWSR1Q01844 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.57■□□□□ 0.885e-7■■■□□ 16.1
EWSR1Q01844 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.575e-7■■■□□ 16.1
Retrieved 100 of 7,101 protein–RNA pairs in 67 ms