RNA–Protein interactions for RNA: ENST00000494174.5

NECAB3-215, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 859 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-215ENST00000494174 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
NECAB3-215ENST00000494174 CCDC180Q9P1Z9 1646 aa43.12■■■■■ 4.49
NECAB3-215ENST00000494174 ABCC9O60706 1549 aa42.16■■■■■ 4.34
NECAB3-215ENST00000494174 RB1CC1Q8TDY2 1594 aa40.61■■■■■ 4.09
NECAB3-215ENST00000494174 NACADO15069 1562 aa40.57■■■■■ 4.08
NECAB3-215ENST00000494174 MYO15BQ96JP2 1530 aa40.4■■■■■ 4.06
NECAB3-215ENST00000494174 ZCCHC6Q5VYS8 1495 aaKnown RBP40.26■■■■■ 4.03
NECAB3-215ENST00000494174 DCAF1Q9Y4B6 1507 aa40.12■■■■■ 4.01
NECAB3-215ENST00000494174 DCAF8L2P0C7V8 631 aa40.1■■■■■ 4.01
NECAB3-215ENST00000494174 UNC13AQ9UPW8 1703 aa39.66■■■■□ 3.94
NECAB3-215ENST00000494174 BICRAQ9NZM4 1560 aa39.42■■■■□ 3.9
NECAB3-215ENST00000494174 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.888e-8■■□□□ 11.7
NECAB3-215ENST00000494174 SHROOM4Q9ULL8 1493 aa39.14■■■■□ 3.86
NECAB3-215ENST00000494174 SCRIBQ14160 1630 aa39.14■■■■□ 3.86
NECAB3-215ENST00000494174 DNAJC5BQ9UF47 199 aa38.9■■■■□ 3.82
NECAB3-215ENST00000494174 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
NECAB3-215ENST00000494174 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
NECAB3-215ENST00000494174 CECR2Q9BXF3 1484 aa37.97■■■■□ 3.67
NECAB3-215ENST00000494174 SMARCA4P51532 1647 aa37.53■■■■□ 3.6
NECAB3-215ENST00000494174 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
NECAB3-215ENST00000494174 NCAPD3P42695 1498 aa37.45■■■■□ 3.59
NECAB3-215ENST00000494174 ATAD2BQ9ULI0 1458 aa37.39■■■■□ 3.58
NECAB3-215ENST00000494174 SMARCA2P51531 1590 aa37.35■■■■□ 3.57
NECAB3-215ENST00000494174 PEG3Q9GZU2 1588 aa37.29■■■■□ 3.56
NECAB3-215ENST00000494174 HMGXB3Q12766 1538 aa37.26■■■■□ 3.55
NECAB3-215ENST00000494174 MROH2BQ7Z745 1585 aa37.19■■■■□ 3.54
NECAB3-215ENST00000494174 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.51
NECAB3-215ENST00000494174 WIZO95785 1651 aa36.74■■■■□ 3.47
NECAB3-215ENST00000494174 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
NECAB3-215ENST00000494174 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
NECAB3-215ENST00000494174 NESP48681 1621 aa36.45■■■■□ 3.43
NECAB3-215ENST00000494174 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
NECAB3-215ENST00000494174 ERCC6Q03468 1493 aa36.35■■■■□ 3.41
NECAB3-215ENST00000494174 CADPSQ9ULU8 1353 aa36.28■■■■□ 3.4
NECAB3-215ENST00000494174 CUX2O14529 1486 aa36.2■■■■□ 3.39
NECAB3-215ENST00000494174 PDS5BQ9NTI5 1447 aa36.18■■■■□ 3.38
NECAB3-215ENST00000494174 CFTRP13569 1480 aa36.07■■■■□ 3.37
NECAB3-215ENST00000494174 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
NECAB3-215ENST00000494174 KIF21AQ7Z4S6 1674 aa36.04■■■■□ 3.36
NECAB3-215ENST00000494174 CCDC88BA6NC98 1476 aa35.95■■■■□ 3.35
NECAB3-215ENST00000494174 FANCD2Q9BXW9 1451 aa35.83■■■■□ 3.33
NECAB3-215ENST00000494174 MRC2Q9UBG0 1479 aa35.82■■■■□ 3.32
NECAB3-215ENST00000494174 CEP164Q9UPV0 1460 aa35.8■■■■□ 3.32
NECAB3-215ENST00000494174 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
NECAB3-215ENST00000494174 WDR62O43379 1518 aa35.76■■■■□ 3.31
NECAB3-215ENST00000494174 URB2Q14146 1524 aaKnown RBP35.51■■■■□ 3.27
NECAB3-215ENST00000494174 SUPT5HO00267 1087 aaKnown RBP35.39■■■■□ 3.26
NECAB3-215ENST00000494174 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
NECAB3-215ENST00000494174 TOPBP1Q92547 1522 aa35.26■■■■□ 3.23
NECAB3-215ENST00000494174 DNAJC5Q9H3Z4 198 aa35.24■■■■□ 3.23
NECAB3-215ENST00000494174 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
NECAB3-215ENST00000494174 IFT140Q96RY7 1462 aa35.11■■■■□ 3.21
NECAB3-215ENST00000494174 POLA1P09884 1462 aaPredicted RBP34.95■■■■□ 3.19
NECAB3-215ENST00000494174 TARBP1Q13395 1621 aaKnown RBP34.93■■■■□ 3.18
NECAB3-215ENST00000494174 CUX1P39880 1505 aa34.91■■■■□ 3.18
NECAB3-215ENST00000494174 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
NECAB3-215ENST00000494174 FGD5Q6ZNL6 1462 aa34.8■■■■□ 3.16
NECAB3-215ENST00000494174 EIF4G3O43432 1585 aaKnown RBP34.78■■■■□ 3.16
NECAB3-215ENST00000494174 SOGA1O94964 1423 aa34.75■■■■□ 3.15
NECAB3-215ENST00000494174 WDR97A6NE52 1622 aa34.74■■■■□ 3.15
NECAB3-215ENST00000494174 RAD54L2Q9Y4B4 1467 aa34.72■■■■□ 3.15
NECAB3-215ENST00000494174 AQRO60306 1485 aaKnown RBP eCLIP34.65■■■■□ 3.144e-8■■■■■ 28.5
NECAB3-215ENST00000494174 BIVM-ERCC5R4GMW8 1640 aa34.61■■■■□ 3.13
NECAB3-215ENST00000494174 TOP2BQ02880 1626 aa34.6■■■■□ 3.13
NECAB3-215ENST00000494174 WRNQ14191 1432 aaPredicted RBP eCLIP34.6■■■■□ 3.13
NECAB3-215ENST00000494174 OSCARQ8IYS5 282 aa34.54■■■■□ 3.12
NECAB3-215ENST00000494174 ABCA10Q8WWZ4 1543 aa34.54■■■■□ 3.12
NECAB3-215ENST00000494174 TDRD9Q8NDG6 1382 aaKnown RBP34.53■■■■□ 3.12
NECAB3-215ENST00000494174 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
NECAB3-215ENST00000494174 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
NECAB3-215ENST00000494174 ABCA5Q8WWZ7 1642 aa34.41■■■■□ 3.1
NECAB3-215ENST00000494174 MAGI1Q96QZ7 1491 aaPredicted RBP34.39■■■■□ 3.1
NECAB3-215ENST00000494174 GAPVD1Q14C86 1478 aa34.37■■■■□ 3.09
NECAB3-215ENST00000494174 SNAPC4Q5SXM2 1469 aa34.35■■■■□ 3.09
NECAB3-215ENST00000494174 CHD1O14646 1710 aa34.34■■■■□ 3.09
NECAB3-215ENST00000494174 PBRM1Q86U86 1689 aa34.3■■■■□ 3.08
NECAB3-215ENST00000494174 SYNJ2O15056 1496 aa34.23■■■■□ 3.07
NECAB3-215ENST00000494174 ERICH3Q5RHP9 1530 aa34.13■■■■□ 3.05
NECAB3-215ENST00000494174 FBLN2P98095 1184 aa34.11■■■■□ 3.05
NECAB3-215ENST00000494174 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
NECAB3-215ENST00000494174 CLASP1Q7Z460 1538 aa34.07■■■■□ 3.04
NECAB3-215ENST00000494174 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
NECAB3-215ENST00000494174 RIMBP3CA6NJZ7 1639 aa34.04■■■■□ 3.04
NECAB3-215ENST00000494174 RIMBP3BA6NNM3 1639 aa34.04■■■■□ 3.04
NECAB3-215ENST00000494174 RIMBP3Q9UFD9 1639 aa34.04■■■■□ 3.04
NECAB3-215ENST00000494174 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
NECAB3-215ENST00000494174 FHAD1B1AJZ9 1412 aa34■■■■□ 3.03
NECAB3-215ENST00000494174 GRIN2AQ12879 1464 aa33.97■■■■□ 3.03
NECAB3-215ENST00000494174 NUP160Q12769 1436 aa33.89■■■■□ 3.02
NECAB3-215ENST00000494174 KIF27Q86VH2 1401 aa33.89■■■■□ 3.02
NECAB3-215ENST00000494174 IGF1RP08069 1367 aa33.81■■■■□ 3
NECAB3-215ENST00000494174 CEP170Q5SW79 1584 aa33.81■■■■□ 3
NECAB3-215ENST00000494174 TRIM41Q8WV44 630 aa33.77■■■■□ 3
NECAB3-215ENST00000494174 ARAP1Q96P48 1450 aa33.76■■■□□ 2.99
NECAB3-215ENST00000494174 CUL7Q14999 1698 aa33.75■■■□□ 2.99
NECAB3-215ENST00000494174 SHROOM2Q13796 1616 aa33.67■■■□□ 2.98
NECAB3-215ENST00000494174 CYB5RLQ6IPT4 315 aa33.59■■■□□ 2.97
NECAB3-215ENST00000494174 RUSC2Q8N2Y8 1516 aa33.58■■■□□ 2.97
NECAB3-215ENST00000494174 CARMIL1Q5VZK9 1371 aa33.56■■■□□ 2.96
NECAB3-215ENST00000494174 KIAA0586Q9BVV6 1533 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms