Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN4O14817 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TSPAN4O14817 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN4O14817 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TSPAN4O14817 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TSPAN4O14817 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TSPAN4O14817 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN4O14817 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN4O14817 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TSPAN4O14817 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.55■□□□□ 0.4
TSPAN4O14817 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN4O14817 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TSPAN4O14817 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 MIR4281-201ENST00000580852 62 ntBASIC17.54■□□□□ 0.4
TSPAN4O14817 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN4O14817 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN4O14817 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN4O14817 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN4O14817 AC106820.2-201ENST00000563775 3264 ntBASIC17.53■□□□□ 0.4
TSPAN4O14817 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
TSPAN4O14817 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TSPAN4O14817 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.53■□□□□ 0.4
TSPAN4O14817 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSPAN4O14817 PCDHAC2-203ENST00000615316 3011 ntBASIC17.53■□□□□ 0.4
TSPAN4O14817 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSPAN4O14817 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.53■□□□□ 0.4
TSPAN4O14817 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN4O14817 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TSPAN4O14817 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.52■□□□□ 0.4
TSPAN4O14817 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN4O14817 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN4O14817 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN4O14817 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN4O14817 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TSPAN4O14817 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.52■□□□□ 0.4
TSPAN4O14817 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.52■□□□□ 0.4
TSPAN4O14817 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.52■□□□□ 0.4
TSPAN4O14817 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TSPAN4O14817 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TSPAN4O14817 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.52■□□□□ 0.39
TSPAN4O14817 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN4O14817 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
TSPAN4O14817 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN4O14817 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN4O14817 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.52■□□□□ 0.39
TSPAN4O14817 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 AC005082.1-201ENST00000413042 2259 ntBASIC17.51■□□□□ 0.39
TSPAN4O14817 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 AC010542.4-201ENST00000563151 1910 ntBASIC17.51■□□□□ 0.39
TSPAN4O14817 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms