RNA–Protein interactions for RNA: ENST00000340147.6

C5orf47-201, Transcript of chromosome 5 open reading frame 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C5orf47, Length 2,522 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf47-201ENST00000340147 NISCHQ9Y2I1 1504 aa39.45■■■■□ 3.91
C5orf47-201ENST00000340147 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
C5orf47-201ENST00000340147 SUPT5HO00267 1087 aaKnown RBP33.48■■■□□ 2.95
C5orf47-201ENST00000340147 ZCCHC6Q5VYS8 1495 aaKnown RBP33.41■■■□□ 2.94
C5orf47-201ENST00000340147 CCDC180Q9P1Z9 1646 aa33.29■■■□□ 2.92
C5orf47-201ENST00000340147 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
C5orf47-201ENST00000340147 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
C5orf47-201ENST00000340147 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
C5orf47-201ENST00000340147 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
C5orf47-201ENST00000340147 HRCP23327 699 aa32.04■■■□□ 2.72
C5orf47-201ENST00000340147 PCGF6Q9BYE7 350 aa31.93■■■□□ 2.7
C5orf47-201ENST00000340147 LOC105371045A0A1W2PR82 267 aa31.77■■■□□ 2.68
C5orf47-201ENST00000340147 ABCC9O60706 1549 aa31.57■■■□□ 2.64
C5orf47-201ENST00000340147 PPARGC1BQ86YN6 1023 aaKnown RBP31.49■■■□□ 2.63
C5orf47-201ENST00000340147 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
C5orf47-201ENST00000340147 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
C5orf47-201ENST00000340147 TRIM26Q12899 539 aaPredicted RBP31.16■■■□□ 2.58
C5orf47-201ENST00000340147 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
C5orf47-201ENST00000340147 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
C5orf47-201ENST00000340147 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
C5orf47-201ENST00000340147 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
C5orf47-201ENST00000340147 EHMT2Q96KQ7 1210 aa30.78■■■□□ 2.52
C5orf47-201ENST00000340147 NACADO15069 1562 aa30.76■■■□□ 2.51
C5orf47-201ENST00000340147 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.51
C5orf47-201ENST00000340147 WIZO95785 1651 aa30.61■■■□□ 2.49
C5orf47-201ENST00000340147 ZEB1P37275 1124 aaPredicted RBP30.49■■■□□ 2.47
C5orf47-201ENST00000340147 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
C5orf47-201ENST00000340147 EIF4G1Q04637 1599 aaKnown RBP30.24■■■□□ 2.43
C5orf47-201ENST00000340147 ABCC8Q09428 1581 aa30.06■■■□□ 2.4
C5orf47-201ENST00000340147 TOP2AP11388 1531 aaKnown RBP30.03■■■□□ 2.4
C5orf47-201ENST00000340147 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
C5orf47-201ENST00000340147 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
C5orf47-201ENST00000340147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.98■■■□□ 2.39
C5orf47-201ENST00000340147 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
C5orf47-201ENST00000340147 UNC13AQ9UPW8 1703 aa29.85■■■□□ 2.37
C5orf47-201ENST00000340147 CCER1Q8TC90 406 aaPredicted RBP29.85■■■□□ 2.37
C5orf47-201ENST00000340147 SOGA1O94964 1423 aa29.84■■■□□ 2.37
C5orf47-201ENST00000340147 TTBK1Q5TCY1 1321 aaPredicted RBP29.83■■■□□ 2.37
C5orf47-201ENST00000340147 CEP162Q5TB80 1403 aa29.76■■■□□ 2.36
C5orf47-201ENST00000340147 SCAF1Q9H7N4 1312 aaKnown RBP29.75■■■□□ 2.35
C5orf47-201ENST00000340147 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
C5orf47-201ENST00000340147 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
C5orf47-201ENST00000340147 TNIKQ9UKE5 1360 aa29.66■■■□□ 2.34
C5orf47-201ENST00000340147 CSRNP3Q8WYN3 585 aa29.64■■■□□ 2.34
C5orf47-201ENST00000340147 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.33
C5orf47-201ENST00000340147 UBTFP17480 764 aaKnown RBP29.59■■■□□ 2.33
C5orf47-201ENST00000340147 EEA1Q15075 1411 aa29.54■■■□□ 2.32
C5orf47-201ENST00000340147 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
C5orf47-201ENST00000340147 GOLGA3Q08378 1498 aa29.43■■■□□ 2.3
C5orf47-201ENST00000340147 DIEXFQ68CQ4 756 aaKnown RBP29.4■■■□□ 2.3
C5orf47-201ENST00000340147 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
C5orf47-201ENST00000340147 NEUROD1Q13562 356 aa29.33■■■□□ 2.29
C5orf47-201ENST00000340147 SYNJ1O43426 1573 aa29.32■■■□□ 2.28
C5orf47-201ENST00000340147 ACIN1Q9UKV3 1341 aaKnown RBP29.32■■■□□ 2.28
C5orf47-201ENST00000340147 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
C5orf47-201ENST00000340147 PELP1Q8IZL8 1130 aaKnown RBP29.18■■■□□ 2.26
C5orf47-201ENST00000340147 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
C5orf47-201ENST00000340147 KIF21BO75037 1637 aa29.16■■■□□ 2.26
C5orf47-201ENST00000340147 CLIP1P30622 1438 aa29.15■■■□□ 2.26
C5orf47-201ENST00000340147 HNRNPUL2Q1KMD3 747 aaKnown RBP29.14■■■□□ 2.26
C5orf47-201ENST00000340147 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
C5orf47-201ENST00000340147 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
C5orf47-201ENST00000340147 RAPGEF2Q9Y4G8 1499 aa29.07■■■□□ 2.24
C5orf47-201ENST00000340147 RANGAP1P46060 587 aaPredicted RBP29.07■■■□□ 2.24
C5orf47-201ENST00000340147 CENPBP07199 599 aaPredicted RBP29.03■■■□□ 2.24
C5orf47-201ENST00000340147 GTF3C3Q9Y5Q9 886 aa29.03■■■□□ 2.24
C5orf47-201ENST00000340147 VPS8Q8N3P4 1428 aa29.03■■■□□ 2.24
C5orf47-201ENST00000340147 APLP2Q06481 763 aa28.92■■■□□ 2.22
C5orf47-201ENST00000340147 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
C5orf47-201ENST00000340147 YTHDC1Q96MU7 727 aaKnown RBP28.81■■■□□ 2.2
C5orf47-201ENST00000340147 MIER1Q8N108 512 aa28.79■■■□□ 2.2
C5orf47-201ENST00000340147 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
C5orf47-201ENST00000340147 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
C5orf47-201ENST00000340147 ARAP1Q96P48 1450 aa28.66■■■□□ 2.18
C5orf47-201ENST00000340147 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
C5orf47-201ENST00000340147 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.18
C5orf47-201ENST00000340147 CUX1P39880 1505 aa28.59■■■□□ 2.17
C5orf47-201ENST00000340147 DHX57Q6P158 1386 aaKnown RBP28.54■■■□□ 2.16
C5orf47-201ENST00000340147 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
C5orf47-201ENST00000340147 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
C5orf47-201ENST00000340147 KIF27Q86VH2 1401 aa28.48■■■□□ 2.15
C5orf47-201ENST00000340147 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
C5orf47-201ENST00000340147 CFTRP13569 1480 aa28.39■■■□□ 2.14
C5orf47-201ENST00000340147 RRBP1Q9P2E9 1410 aaKnown RBP28.39■■■□□ 2.13
C5orf47-201ENST00000340147 ARHGAP35Q9NRY4 1499 aa28.37■■■□□ 2.13
C5orf47-201ENST00000340147 ITGAEP38570 1179 aa28.3■■■□□ 2.12
C5orf47-201ENST00000340147 CCNB3Q8WWL7 1395 aa28.29■■■□□ 2.12
C5orf47-201ENST00000340147 CUX2O14529 1486 aa28.22■■■□□ 2.11
C5orf47-201ENST00000340147 IGF1RP08069 1367 aa28.21■■■□□ 2.11
C5orf47-201ENST00000340147 RAB3GAP2Q9H2M9 1393 aa28.1■■■□□ 2.09
C5orf47-201ENST00000340147 CARMIL1Q5VZK9 1371 aa28.07■■■□□ 2.08
C5orf47-201ENST00000340147 TIAM1Q13009 1591 aa28.07■■■□□ 2.08
C5orf47-201ENST00000340147 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
C5orf47-201ENST00000340147 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
C5orf47-201ENST00000340147 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
C5orf47-201ENST00000340147 MAPKBP1O60336 1514 aa28.02■■■□□ 2.08
C5orf47-201ENST00000340147 PHLDB1Q86UU1 1377 aa27.99■■■□□ 2.07
C5orf47-201ENST00000340147 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
C5orf47-201ENST00000340147 P3H3Q8IVL6 736 aa27.98■■■□□ 2.07
C5orf47-201ENST00000340147 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms