RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
BLOC1S3-201ENST00000433642 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
BLOC1S3-201ENST00000433642 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
BLOC1S3-201ENST00000433642 ZCCHC6Q5VYS8 1495 aaKnown RBP33■■■□□ 2.87
BLOC1S3-201ENST00000433642 SUPT5HO00267 1087 aaKnown RBP32.64■■■□□ 2.82
BLOC1S3-201ENST00000433642 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
BLOC1S3-201ENST00000433642 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
BLOC1S3-201ENST00000433642 CHIC1Q5VXU3 224 aa31.81■■■□□ 2.68
BLOC1S3-201ENST00000433642 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.67
BLOC1S3-201ENST00000433642 ABCC9O60706 1549 aa31.15■■■□□ 2.58
BLOC1S3-201ENST00000433642 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
BLOC1S3-201ENST00000433642 HRCP23327 699 aa30.92■■■□□ 2.54
BLOC1S3-201ENST00000433642 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
BLOC1S3-201ENST00000433642 LOC105371045A0A1W2PR82 267 aa30.88■■■□□ 2.53
BLOC1S3-201ENST00000433642 PCGF6Q9BYE7 350 aa30.86■■■□□ 2.53
BLOC1S3-201ENST00000433642 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
BLOC1S3-201ENST00000433642 NACADO15069 1562 aa30.58■■■□□ 2.49
BLOC1S3-201ENST00000433642 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
BLOC1S3-201ENST00000433642 TRIM41Q8WV44 630 aa30.39■■■□□ 2.45
BLOC1S3-201ENST00000433642 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
BLOC1S3-201ENST00000433642 PPARGC1BQ86YN6 1023 aaKnown RBP30.3■■■□□ 2.44
BLOC1S3-201ENST00000433642 TRIM26Q12899 539 aaPredicted RBP30.24■■■□□ 2.43
BLOC1S3-201ENST00000433642 WIZO95785 1651 aa30.18■■■□□ 2.42
BLOC1S3-201ENST00000433642 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
BLOC1S3-201ENST00000433642 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
BLOC1S3-201ENST00000433642 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
BLOC1S3-201ENST00000433642 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
BLOC1S3-201ENST00000433642 PELP1Q8IZL8 1130 aaKnown RBP29.82■■■□□ 2.36
BLOC1S3-201ENST00000433642 UNC13AQ9UPW8 1703 aa29.69■■■□□ 2.34
BLOC1S3-201ENST00000433642 SMARCA4P51532 1647 aa29.68■■■□□ 2.34
BLOC1S3-201ENST00000433642 TOP2AP11388 1531 aaKnown RBP29.68■■■□□ 2.34
BLOC1S3-201ENST00000433642 CCDC88BA6NC98 1476 aa29.57■■■□□ 2.32
BLOC1S3-201ENST00000433642 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
BLOC1S3-201ENST00000433642 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
BLOC1S3-201ENST00000433642 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
BLOC1S3-201ENST00000433642 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
BLOC1S3-201ENST00000433642 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
BLOC1S3-201ENST00000433642 SOGA1O94964 1423 aa29.27■■■□□ 2.28
BLOC1S3-201ENST00000433642 SCAF1Q9H7N4 1312 aaKnown RBP29.18■■■□□ 2.26
BLOC1S3-201ENST00000433642 RUSC2Q8N2Y8 1516 aa29.14■■■□□ 2.25
BLOC1S3-201ENST00000433642 CEP162Q5TB80 1403 aa29.13■■■□□ 2.25
BLOC1S3-201ENST00000433642 WRNQ14191 1432 aaPredicted RBP eCLIP29.12■■■□□ 2.25
BLOC1S3-201ENST00000433642 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
BLOC1S3-201ENST00000433642 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
BLOC1S3-201ENST00000433642 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
BLOC1S3-201ENST00000433642 EEA1Q15075 1411 aa29.06■■■□□ 2.24
BLOC1S3-201ENST00000433642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.06■■■□□ 2.24
BLOC1S3-201ENST00000433642 TTBK1Q5TCY1 1321 aaPredicted RBP28.96■■■□□ 2.23
BLOC1S3-201ENST00000433642 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
BLOC1S3-201ENST00000433642 UBTFP17480 764 aaKnown RBP28.92■■■□□ 2.22
BLOC1S3-201ENST00000433642 ATAD2BQ9ULI0 1458 aa28.9■■■□□ 2.22
BLOC1S3-201ENST00000433642 GOLGA3Q08378 1498 aa28.89■■■□□ 2.22
BLOC1S3-201ENST00000433642 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
BLOC1S3-201ENST00000433642 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
BLOC1S3-201ENST00000433642 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
BLOC1S3-201ENST00000433642 KIF21BO75037 1637 aa28.7■■■□□ 2.19
BLOC1S3-201ENST00000433642 MYT1Q01538 1121 aa28.69■■■□□ 2.18
BLOC1S3-201ENST00000433642 CLIP1P30622 1438 aa28.57■■■□□ 2.16
BLOC1S3-201ENST00000433642 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
BLOC1S3-201ENST00000433642 TOP2BQ02880 1626 aa28.5■■■□□ 2.15
BLOC1S3-201ENST00000433642 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
BLOC1S3-201ENST00000433642 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
BLOC1S3-201ENST00000433642 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
BLOC1S3-201ENST00000433642 RANGAP1P46060 587 aaPredicted RBP28.35■■■□□ 2.13
BLOC1S3-201ENST00000433642 HNRNPUL2Q1KMD3 747 aaKnown RBP28.35■■■□□ 2.13
BLOC1S3-201ENST00000433642 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
BLOC1S3-201ENST00000433642 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
BLOC1S3-201ENST00000433642 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
BLOC1S3-201ENST00000433642 APLP2Q06481 763 aa28.25■■■□□ 2.11
BLOC1S3-201ENST00000433642 CUX1P39880 1505 aa28.23■■■□□ 2.11
BLOC1S3-201ENST00000433642 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
BLOC1S3-201ENST00000433642 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
BLOC1S3-201ENST00000433642 NEUROD1Q13562 356 aa28.21■■■□□ 2.11
BLOC1S3-201ENST00000433642 ZNF316A6NFI3 1004 aaPredicted RBP28.2■■■□□ 2.1
BLOC1S3-201ENST00000433642 ARAP1Q96P48 1450 aa28.14■■■□□ 2.1
BLOC1S3-201ENST00000433642 CFTRP13569 1480 aa28.12■■■□□ 2.09
BLOC1S3-201ENST00000433642 GTF3C3Q9Y5Q9 886 aa28.09■■■□□ 2.09
BLOC1S3-201ENST00000433642 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
BLOC1S3-201ENST00000433642 KANK4Q5T7N3 995 aaPredicted RBP28■■■□□ 2.07
BLOC1S3-201ENST00000433642 CENPBP07199 599 aaPredicted RBP27.99■■■□□ 2.07
BLOC1S3-201ENST00000433642 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
BLOC1S3-201ENST00000433642 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
BLOC1S3-201ENST00000433642 DHX57Q6P158 1386 aaKnown RBP27.84■■■□□ 2.05
BLOC1S3-201ENST00000433642 MIER1Q8N108 512 aa27.83■■■□□ 2.05
BLOC1S3-201ENST00000433642 RRBP1Q9P2E9 1410 aaKnown RBP27.82■■■□□ 2.04
BLOC1S3-201ENST00000433642 CUX2O14529 1486 aa27.81■■■□□ 2.04
BLOC1S3-201ENST00000433642 IGF1RP08069 1367 aa27.8■■■□□ 2.04
BLOC1S3-201ENST00000433642 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
BLOC1S3-201ENST00000433642 CLSPNQ9HAW4 1339 aa27.76■■■□□ 2.03
BLOC1S3-201ENST00000433642 YTHDC1Q96MU7 727 aaKnown RBP27.74■■■□□ 2.03
BLOC1S3-201ENST00000433642 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.03
BLOC1S3-201ENST00000433642 CCNB3Q8WWL7 1395 aa27.68■■■□□ 2.02
BLOC1S3-201ENST00000433642 CARMIL1Q5VZK9 1371 aa27.65■■■□□ 2.02
BLOC1S3-201ENST00000433642 TIAM1Q13009 1591 aa27.57■■■□□ 2
BLOC1S3-201ENST00000433642 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
BLOC1S3-201ENST00000433642 ITGAEP38570 1179 aa27.56■■■□□ 2
BLOC1S3-201ENST00000433642 MAP3K1Q13233 1512 aa27.53■■■□□ 2
BLOC1S3-201ENST00000433642 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
BLOC1S3-201ENST00000433642 LRRC9Q6ZRR7 1453 aa27.47■■□□□ 1.99
BLOC1S3-201ENST00000433642 RAB3GAP2Q9H2M9 1393 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms