RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 NISCHQ9Y2I1 1504 aa38.94■■■■□ 3.82
FOXC1-201ENST00000380874 SHROOM4Q9ULL8 1493 aa34.51■■■■□ 3.11
FOXC1-201ENST00000380874 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
FOXC1-201ENST00000380874 SUPT5HO00267 1087 aaKnown RBP34.05■■■■□ 3.04
FOXC1-201ENST00000380874 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
FOXC1-201ENST00000380874 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.8
FOXC1-201ENST00000380874 CHIC1Q5VXU3 224 aa32.34■■■□□ 2.77
FOXC1-201ENST00000380874 PCGF6Q9BYE7 350 aa31.92■■■□□ 2.7
FOXC1-201ENST00000380874 EHMT2Q96KQ7 1210 aa31.81■■■□□ 2.68
FOXC1-201ENST00000380874 LOC105371045A0A1W2PR82 267 aa31.78■■■□□ 2.68
FOXC1-201ENST00000380874 MYO15BQ96JP2 1530 aa31.71■■■□□ 2.67
FOXC1-201ENST00000380874 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
FOXC1-201ENST00000380874 ABCC9O60706 1549 aa31.51■■■□□ 2.63
FOXC1-201ENST00000380874 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
FOXC1-201ENST00000380874 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
FOXC1-201ENST00000380874 SCRIBQ14160 1630 aa31.39■■■□□ 2.61
FOXC1-201ENST00000380874 HRCP23327 699 aa31.34■■■□□ 2.61
FOXC1-201ENST00000380874 PPARGC1BQ86YN6 1023 aaKnown RBP31.05■■■□□ 2.56
FOXC1-201ENST00000380874 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.56
FOXC1-201ENST00000380874 TRIM26Q12899 539 aaPredicted RBP30.92■■■□□ 2.54
FOXC1-201ENST00000380874 TTBK1Q5TCY1 1321 aaPredicted RBP30.71■■■□□ 2.51
FOXC1-201ENST00000380874 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
FOXC1-201ENST00000380874 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
FOXC1-201ENST00000380874 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
FOXC1-201ENST00000380874 NACADO15069 1562 aa30.54■■■□□ 2.48
FOXC1-201ENST00000380874 MROH2BQ7Z745 1585 aa30.4■■■□□ 2.46
FOXC1-201ENST00000380874 ZEB1P37275 1124 aaPredicted RBP30.3■■■□□ 2.44
FOXC1-201ENST00000380874 UBTFP17480 764 aaKnown RBP30.29■■■□□ 2.44
FOXC1-201ENST00000380874 RANGAP1P46060 587 aaPredicted RBP30.16■■■□□ 2.42
FOXC1-201ENST00000380874 WIZO95785 1651 aa30.16■■■□□ 2.42
FOXC1-201ENST00000380874 CCER1Q8TC90 406 aaPredicted RBP30.16■■■□□ 2.42
FOXC1-201ENST00000380874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.04■■■□□ 2.4
FOXC1-201ENST00000380874 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
FOXC1-201ENST00000380874 APLP2Q06481 763 aa29.81■■■□□ 2.36
FOXC1-201ENST00000380874 CSRNP3Q8WYN3 585 aa29.81■■■□□ 2.36
FOXC1-201ENST00000380874 ABCC8Q09428 1581 aa29.76■■■□□ 2.35
FOXC1-201ENST00000380874 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
FOXC1-201ENST00000380874 SOGA1O94964 1423 aa29.62■■■□□ 2.33
FOXC1-201ENST00000380874 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
FOXC1-201ENST00000380874 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
FOXC1-201ENST00000380874 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
FOXC1-201ENST00000380874 CEP162Q5TB80 1403 aa29.5■■■□□ 2.31
FOXC1-201ENST00000380874 WRNQ14191 1432 aaPredicted RBP eCLIP29.41■■■□□ 2.3
FOXC1-201ENST00000380874 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
FOXC1-201ENST00000380874 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
FOXC1-201ENST00000380874 TNIKQ9UKE5 1360 aa29.32■■■□□ 2.28
FOXC1-201ENST00000380874 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.28
FOXC1-201ENST00000380874 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
FOXC1-201ENST00000380874 EEA1Q15075 1411 aa29.24■■■□□ 2.27
FOXC1-201ENST00000380874 GOLGA3Q08378 1498 aa29.21■■■□□ 2.27
FOXC1-201ENST00000380874 YTHDC1Q96MU7 727 aaKnown RBP29.12■■■□□ 2.25
FOXC1-201ENST00000380874 CLIP1P30622 1438 aa29.11■■■□□ 2.25
FOXC1-201ENST00000380874 ATP1B4Q9UN42 357 aaPredicted RBP29.1■■■□□ 2.25
FOXC1-201ENST00000380874 ITGAEP38570 1179 aa29.1■■■□□ 2.25
FOXC1-201ENST00000380874 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
FOXC1-201ENST00000380874 ATAD2BQ9ULI0 1458 aa29.07■■■□□ 2.24
FOXC1-201ENST00000380874 CENPBP07199 599 aaPredicted RBP29.06■■■□□ 2.24
FOXC1-201ENST00000380874 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
FOXC1-201ENST00000380874 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
FOXC1-201ENST00000380874 EIF4G1Q04637 1599 aaKnown RBP29■■■□□ 2.23
FOXC1-201ENST00000380874 ZNF316A6NFI3 1004 aaPredicted RBP28.89■■■□□ 2.22
FOXC1-201ENST00000380874 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
FOXC1-201ENST00000380874 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
FOXC1-201ENST00000380874 SYNJ1O43426 1573 aa28.8■■■□□ 2.2
FOXC1-201ENST00000380874 NEUROD1Q13562 356 aa28.75■■■□□ 2.19
FOXC1-201ENST00000380874 ACIN1Q9UKV3 1341 aaKnown RBP28.75■■■□□ 2.19
FOXC1-201ENST00000380874 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
FOXC1-201ENST00000380874 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
FOXC1-201ENST00000380874 GTF3C3Q9Y5Q9 886 aa28.68■■■□□ 2.18
FOXC1-201ENST00000380874 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
FOXC1-201ENST00000380874 KANK4Q5T7N3 995 aaPredicted RBP28.58■■■□□ 2.17
FOXC1-201ENST00000380874 FAM50AQ14320 339 aaKnown RBP28.57■■■□□ 2.16
FOXC1-201ENST00000380874 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
FOXC1-201ENST00000380874 MIER1Q8N108 512 aa28.5■■■□□ 2.15
FOXC1-201ENST00000380874 KIF21BO75037 1637 aa28.45■■■□□ 2.14
FOXC1-201ENST00000380874 CUX2O14529 1486 aa28.4■■■□□ 2.14
FOXC1-201ENST00000380874 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
FOXC1-201ENST00000380874 PELP1Q8IZL8 1130 aaKnown RBP28.37■■■□□ 2.13
FOXC1-201ENST00000380874 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
FOXC1-201ENST00000380874 CARMIL1Q5VZK9 1371 aa28.26■■■□□ 2.11
FOXC1-201ENST00000380874 CUX1P39880 1505 aa28.25■■■□□ 2.11
FOXC1-201ENST00000380874 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
FOXC1-201ENST00000380874 PRXQ9BXM0 1461 aa28.2■■■□□ 2.11
FOXC1-201ENST00000380874 CCNB3Q8WWL7 1395 aa28.18■■■□□ 2.1
FOXC1-201ENST00000380874 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
FOXC1-201ENST00000380874 CFTRP13569 1480 aa28.17■■■□□ 2.1
FOXC1-201ENST00000380874 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
FOXC1-201ENST00000380874 IGF1RP08069 1367 aa28.12■■■□□ 2.09
FOXC1-201ENST00000380874 ARID3CA6NKF2 412 aa28.1■■■□□ 2.09
FOXC1-201ENST00000380874 DHX57Q6P158 1386 aaKnown RBP28.08■■■□□ 2.09
FOXC1-201ENST00000380874 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
FOXC1-201ENST00000380874 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
FOXC1-201ENST00000380874 ARHGAP35Q9NRY4 1499 aa28■■■□□ 2.07
FOXC1-201ENST00000380874 CLSPNQ9HAW4 1339 aa27.99■■■□□ 2.07
FOXC1-201ENST00000380874 SIN3AQ96ST3 1273 aa27.99■■■□□ 2.07
FOXC1-201ENST00000380874 BIVM-ERCC5R4GMW8 1640 aa27.98■■■□□ 2.07
FOXC1-201ENST00000380874 HIRIP3Q9BW71 556 aaPredicted RBP27.97■■■□□ 2.07
FOXC1-201ENST00000380874 FANCD2Q9BXW9 1451 aa27.93■■■□□ 2.06
FOXC1-201ENST00000380874 RAB3GAP2Q9H2M9 1393 aa27.93■■■□□ 2.06
FOXC1-201ENST00000380874 RAD54L2Q9Y4B4 1467 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms