Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 GPN2-203ENST00000431781 739 ntTSL 520.91■□□□□ 0.942e-8■□□□□ 8.3
DDX3XO00571 SMPD4-210ENST00000441135 699 ntTSL 418.8■□□□□ 0.62e-8■□□□□ 8.3
DDX3XO00571 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.592e-8■□□□□ 8.3
DDX3XO00571 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.032e-8■□□□□ 8.3
DDX3XO00571 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.042e-8■□□□□ 8.3
DDX3XO00571 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.112e-8■□□□□ 8.3
DDX3XO00571 SMPD4-213ENST00000454468 3586 ntTSL 1 (best)12.96□□□□□ -0.342e-8■□□□□ 8.3
DDX3XO00571 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC12.1□□□□□ -0.472e-8■□□□□ 8.3
DDX3XO00571 SMPD4-217ENST00000473720 555 ntTSL 412.04□□□□□ -0.482e-8■□□□□ 8.3
DDX3XO00571 MTMR4-208ENST00000583243 317 ntTSL 211.68□□□□□ -0.542e-8■□□□□ 8.3
DDX3XO00571 NEK3-204ENST00000552973 941 ntTSL 511.51□□□□□ -0.572e-8■□□□□ 8.3
DDX3XO00571 SMPD4-206ENST00000433118 3335 ntTSL 511.44□□□□□ -0.582e-8■□□□□ 8.3
DDX3XO00571 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC11.24□□□□□ -0.612e-8■□□□□ 8.3
DDX3XO00571 NEK3-203ENST00000551355 727 ntTSL 511.05□□□□□ -0.642e-8■□□□□ 8.3
DDX3XO00571 SMPD4-203ENST00000412570 3601 ntTSL 210.42□□□□□ -0.742e-8■□□□□ 8.3
DDX3XO00571 SMPD4-208ENST00000439029 566 ntTSL 49.2□□□□□ -0.942e-8■□□□□ 8.3
DDX3XO00571 NEK3-207ENST00000617054 3256 ntTSL 58.44□□□□□ -1.062e-8■□□□□ 8.3
DDX3XO00571 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.04□□□□□ -1.442e-8■□□□□ 8.3
DDX3XO00571 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.436e-9■□□□□ 8.3
DDX3XO00571 NAMPT-205ENST00000424768 1147 ntTSL 411.73□□□□□ -0.536e-9■□□□□ 8.3
DDX3XO00571 NAMPT-203ENST00000393618 592 ntTSL 411.13□□□□□ -0.636e-9■□□□□ 8.3
DDX3XO00571 NAMPT-206ENST00000441045 589 ntTSL 410.09□□□□□ -0.796e-9■□□□□ 8.3
DDX3XO00571 NAMPT-213ENST00000491027 1009 ntTSL 28.85□□□□□ -0.996e-9■□□□□ 8.3
DDX3XO00571 NAMPT-204ENST00000417537 300 ntTSL 48.17□□□□□ -1.16e-9■□□□□ 8.3
DDX3XO00571 NAMPT-212ENST00000489732 1976 ntTSL 27.64□□□□□ -1.196e-9■□□□□ 8.3
DDX3XO00571 NAMPT-210ENST00000486949 1115 ntTSL 27.46□□□□□ -1.226e-9■□□□□ 8.3
DDX3XO00571 NAMPT-211ENST00000489358 581 ntTSL 35.74□□□□□ -1.496e-9■□□□□ 8.3
DDX3XO00571 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.25□□□□□ -1.576e-9■□□□□ 8.3
DDX3XO00571 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.075e-12■□□□□ 8.3
DDX3XO00571 TROAP-203ENST00000546735 1213 ntTSL 1 (best)14.43□□□□□ -0.15e-12■□□□□ 8.3
DDX3XO00571 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.125e-12■□□□□ 8.3
DDX3XO00571 TROAP-212ENST00000550346 640 ntAPPRIS ALT2 TSL 313.74□□□□□ -0.215e-12■□□□□ 8.3
DDX3XO00571 TROAP-211ENST00000549891 932 ntTSL 1 (best)13.47□□□□□ -0.255e-12■□□□□ 8.3
DDX3XO00571 TROAP-215ENST00000551245 2771 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.45e-12■□□□□ 8.3
DDX3XO00571 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.425e-12■□□□□ 8.3
DDX3XO00571 TROAP-204ENST00000546776 1011 ntTSL 311.87□□□□□ -0.515e-12■□□□□ 8.3
DDX3XO00571 TROAP-214ENST00000551192 1469 ntTSL 211.62□□□□□ -0.555e-12■□□□□ 8.3
DDX3XO00571 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.565e-12■□□□□ 8.3
DDX3XO00571 TROAP-205ENST00000547807 915 ntAPPRIS ALT2 TSL 311.13□□□□□ -0.635e-12■□□□□ 8.3
DDX3XO00571 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.785e-12■□□□□ 8.3
DDX3XO00571 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.815e-12■□□□□ 8.3
DDX3XO00571 PRKAR1A-219ENST00000589480 549 ntTSL 29.81□□□□□ -0.842e-17■□□□□ 8.3
DDX3XO00571 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.892e-17■□□□□ 8.3
DDX3XO00571 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.3□□□□□ -0.922e-17■□□□□ 8.3
DDX3XO00571 PRKAR1A-210ENST00000585981 995 ntTSL 58.76□□□□□ -1.012e-17■□□□□ 8.3
DDX3XO00571 PRKAR1A-208ENST00000585815 553 ntTSL 58.64□□□□□ -1.032e-17■□□□□ 8.3
DDX3XO00571 PRKAR1A-213ENST00000588178 583 ntTSL 45.66□□□□□ -1.52e-17■□□□□ 8.3
DDX3XO00571 ZNF219-204ENST00000553296 560 ntTSL 217.99■□□□□ 0.474e-17■□□□□ 8.3
DDX3XO00571 ZNF219-208ENST00000555270 798 ntTSL 417.68■□□□□ 0.424e-17■□□□□ 8.3
DDX3XO00571 ZNF219-207ENST00000554923 567 ntTSL 415.43■□□□□ 0.064e-17■□□□□ 8.3
DDX3XO00571 CCDC144NL-AS1-205ENST00000439794 481 ntTSL 314.32□□□□□ -0.124e-17■□□□□ 8.3
DDX3XO00571 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.32□□□□□ -0.124e-17■□□□□ 8.3
DDX3XO00571 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC12.03□□□□□ -0.484e-17■□□□□ 8.3
DDX3XO00571 CCDC144NL-AS1-218ENST00000583962 3352 ntTSL 1 (best)11.59□□□□□ -0.554e-17■□□□□ 8.3
DDX3XO00571 CCDC144NL-AS1-215ENST00000582324 756 ntTSL 310.52□□□□□ -0.734e-17■□□□□ 8.3
DDX3XO00571 CCDC144NL-AS1-201ENST00000417232 709 ntTSL 36.27□□□□□ -1.414e-17■□□□□ 8.3
DDX3XO00571 OBSL1-208ENST00000465149 5380 ntTSL 219.98■□□□□ 0.791e-6■□□□□ 8.3
DDX3XO00571 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.381e-6■□□□□ 8.3
DDX3XO00571 OBSL1-215ENST00000604031 1774 ntTSL 217.26■□□□□ 0.351e-6■□□□□ 8.3
DDX3XO00571 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.11■□□□□ 0.331e-6■□□□□ 8.3
DDX3XO00571 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.321e-6■□□□□ 8.3
DDX3XO00571 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.151e-6■□□□□ 8.3
DDX3XO00571 DOT1L-203ENST00000452696 624 ntTSL 315.14■□□□□ 0.011e-6■□□□□ 8.3
DDX3XO00571 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.381e-6■□□□□ 8.3
DDX3XO00571 MTG1-204ENST00000473735 2212 ntTSL 523.41■■□□□ 1.342e-9■□□□□ 8.3
DDX3XO00571 TRMU-204ENST00000441818 1793 ntTSL 1 (best)22.86■■□□□ 1.252e-9■□□□□ 8.3
DDX3XO00571 TRMU-207ENST00000457572 1882 ntTSL 222.47■■□□□ 1.192e-9■□□□□ 8.3
DDX3XO00571 TRMU-205ENST00000453630 1775 ntTSL 221.82■■□□□ 1.082e-9■□□□□ 8.3
DDX3XO00571 TRMU-203ENST00000381021 1830 ntTSL 221.64■■□□□ 1.052e-9■□□□□ 8.3
DDX3XO00571 TRMU-206ENST00000456595 1688 ntTSL 1 (best)21.58■■□□□ 1.052e-9■□□□□ 8.3
DDX3XO00571 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.022e-9■□□□□ 8.3
DDX3XO00571 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.74■□□□□ 0.912e-9■□□□□ 8.3
DDX3XO00571 DIP2B-204ENST00000549620 2676 ntTSL 1 (best)20.67■□□□□ 0.92e-9■□□□□ 8.3
DDX3XO00571 MTG1-207ENST00000495014 871 ntTSL 319.45■□□□□ 0.72e-9■□□□□ 8.3
DDX3XO00571 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.682e-9■□□□□ 8.3
DDX3XO00571 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.562e-9■□□□□ 8.3
DDX3XO00571 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.38■□□□□ 0.532e-9■□□□□ 8.3
DDX3XO00571 MTG1-202ENST00000432508 953 ntTSL 217.72■□□□□ 0.432e-9■□□□□ 8.3
DDX3XO00571 MTG1-208ENST00000498790 693 ntTSL 217.72■□□□□ 0.432e-9■□□□□ 8.3
DDX3XO00571 TRMU-215ENST00000486620 814 ntTSL 316.86■□□□□ 0.292e-9■□□□□ 8.3
DDX3XO00571 ITGB5-210ENST00000496703 789 ntTSL 216.63■□□□□ 0.252e-9■□□□□ 8.3
DDX3XO00571 ITGB5-209ENST00000488466 971 ntTSL 516.38■□□□□ 0.212e-9■□□□□ 8.3
DDX3XO00571 MTG1-203ENST00000460848 2730 ntTSL 215.3■□□□□ 0.042e-9■□□□□ 8.3
DDX3XO00571 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.64□□□□□ -0.072e-9■□□□□ 8.3
DDX3XO00571 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.65□□□□□ -0.222e-9■□□□□ 8.3
DDX3XO00571 KAZN-202ENST00000376028 800 ntTSL 313.03□□□□□ -0.322e-9■□□□□ 8.3
DDX3XO00571 ZER1-204ENST00000494461 542 ntTSL 212.62□□□□□ -0.392e-9■□□□□ 8.3
DDX3XO00571 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.662e-9■□□□□ 8.3
DDX3XO00571 PRRC2C-205ENST00000463586 3771 ntTSL 26.88□□□□□ -1.312e-9■□□□□ 8.3
DDX3XO00571 ANXA4-210ENST00000484219 338 ntTSL 55.2□□□□□ -1.582e-9■□□□□ 8.3
DDX3XO00571 PTPN12-216ENST00000523952 500 ntTSL 48.93□□□□□ -0.981e-25■□□□□ 8.3
DDX3XO00571 PTPN12-209ENST00000460731 582 ntTSL 25.93□□□□□ -1.461e-25■□□□□ 8.3
DDX3XO00571 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.86■□□□□ 0.932e-12■□□□□ 8.3
DDX3XO00571 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.022e-12■□□□□ 8.3
DDX3XO00571 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.22□□□□□ -0.132e-12■□□□□ 8.3
DDX3XO00571 SUN2-205ENST00000420859 538 ntTSL 518.16■□□□□ 0.51e-10■□□□□ 8.3
DDX3XO00571 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.381e-10■□□□□ 8.3
DDX3XO00571 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.64■□□□□ 0.251e-10■□□□□ 8.3
DDX3XO00571 RAB17-211ENST00000487008 558 ntTSL 316.51■□□□□ 0.231e-10■□□□□ 8.3
DDX3XO00571 SUN2-212ENST00000456894 1074 ntTSL 516.5■□□□□ 0.231e-10■□□□□ 8.3
Retrieved 100 of 47,714 protein–RNA pairs in 3806 ms