RNA–Protein interactions for RNA: ENST00000551192.5

TROAP-214, Transcript of trophinin associated protein, humanhuman

TSL 2

Gene TROAP, Length 1,469 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-214ENST00000551192 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
TROAP-214ENST00000551192 CCDC180Q9P1Z9 1646 aa23.42■■□□□ 1.34
TROAP-214ENST00000551192 ABCC9O60706 1549 aa22.97■■□□□ 1.27
TROAP-214ENST00000551192 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
TROAP-214ENST00000551192 NACADO15069 1562 aa22.06■■□□□ 1.12
TROAP-214ENST00000551192 ZCCHC6Q5VYS8 1495 aaKnown RBP22■■□□□ 1.11
TROAP-214ENST00000551192 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
TROAP-214ENST00000551192 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
TROAP-214ENST00000551192 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
TROAP-214ENST00000551192 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
TROAP-214ENST00000551192 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
TROAP-214ENST00000551192 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
TROAP-214ENST00000551192 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
TROAP-214ENST00000551192 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
TROAP-214ENST00000551192 SCRIBQ14160 1630 aa21.31■■□□□ 1
TROAP-214ENST00000551192 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
TROAP-214ENST00000551192 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
TROAP-214ENST00000551192 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
TROAP-214ENST00000551192 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
TROAP-214ENST00000551192 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
TROAP-214ENST00000551192 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
TROAP-214ENST00000551192 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.85
TROAP-214ENST00000551192 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
TROAP-214ENST00000551192 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
TROAP-214ENST00000551192 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
TROAP-214ENST00000551192 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
TROAP-214ENST00000551192 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
TROAP-214ENST00000551192 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
TROAP-214ENST00000551192 WIZO95785 1651 aa20.12■□□□□ 0.81
TROAP-214ENST00000551192 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.8
TROAP-214ENST00000551192 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
TROAP-214ENST00000551192 CUX2O14529 1486 aa19.88■□□□□ 0.77
TROAP-214ENST00000551192 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
TROAP-214ENST00000551192 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
TROAP-214ENST00000551192 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
TROAP-214ENST00000551192 NESP48681 1621 aa19.78■□□□□ 0.76
TROAP-214ENST00000551192 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
TROAP-214ENST00000551192 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
TROAP-214ENST00000551192 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
TROAP-214ENST00000551192 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
TROAP-214ENST00000551192 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
TROAP-214ENST00000551192 KIF21AQ7Z4S6 1674 aa19.63■□□□□ 0.73
TROAP-214ENST00000551192 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
TROAP-214ENST00000551192 CFTRP13569 1480 aa19.52■□□□□ 0.72
TROAP-214ENST00000551192 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
TROAP-214ENST00000551192 WDR62O43379 1518 aa19.46■□□□□ 0.71
TROAP-214ENST00000551192 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
TROAP-214ENST00000551192 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
TROAP-214ENST00000551192 FANCD2Q9BXW9 1451 aa19.42■□□□□ 0.7
TROAP-214ENST00000551192 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
TROAP-214ENST00000551192 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
TROAP-214ENST00000551192 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
TROAP-214ENST00000551192 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
TROAP-214ENST00000551192 DNMBPQ6XZF7 1577 aa19.08■□□□□ 0.64
TROAP-214ENST00000551192 CUX1P39880 1505 aa19.03■□□□□ 0.64
TROAP-214ENST00000551192 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
TROAP-214ENST00000551192 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
TROAP-214ENST00000551192 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
TROAP-214ENST00000551192 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
TROAP-214ENST00000551192 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
TROAP-214ENST00000551192 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
TROAP-214ENST00000551192 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
TROAP-214ENST00000551192 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
TROAP-214ENST00000551192 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
TROAP-214ENST00000551192 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
TROAP-214ENST00000551192 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
TROAP-214ENST00000551192 SOGA1O94964 1423 aa18.85■□□□□ 0.61
TROAP-214ENST00000551192 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
TROAP-214ENST00000551192 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.61e-7■■■■■ 63.9
TROAP-214ENST00000551192 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
TROAP-214ENST00000551192 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
TROAP-214ENST00000551192 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
TROAP-214ENST00000551192 CHD1O14646 1710 aa18.72■□□□□ 0.59
TROAP-214ENST00000551192 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
TROAP-214ENST00000551192 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
TROAP-214ENST00000551192 RIMBP3CA6NJZ7 1639 aa18.65■□□□□ 0.58
TROAP-214ENST00000551192 RIMBP3BA6NNM3 1639 aa18.65■□□□□ 0.58
TROAP-214ENST00000551192 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
TROAP-214ENST00000551192 RIMBP3Q9UFD9 1639 aa18.65■□□□□ 0.58
TROAP-214ENST00000551192 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
TROAP-214ENST00000551192 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.57
TROAP-214ENST00000551192 ARHGEF11O15085 1522 aa18.62■□□□□ 0.57
TROAP-214ENST00000551192 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
TROAP-214ENST00000551192 FBLN2P98095 1184 aa18.61■□□□□ 0.57
TROAP-214ENST00000551192 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
TROAP-214ENST00000551192 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
TROAP-214ENST00000551192 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
TROAP-214ENST00000551192 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
TROAP-214ENST00000551192 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
TROAP-214ENST00000551192 ERICH3Q5RHP9 1530 aa18.52■□□□□ 0.56
TROAP-214ENST00000551192 IGF1RP08069 1367 aa18.49■□□□□ 0.55
TROAP-214ENST00000551192 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
TROAP-214ENST00000551192 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
TROAP-214ENST00000551192 CUL7Q14999 1698 aa18.42■□□□□ 0.54
TROAP-214ENST00000551192 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
TROAP-214ENST00000551192 EEA1Q15075 1411 aa18.42■□□□□ 0.54
TROAP-214ENST00000551192 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
TROAP-214ENST00000551192 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
TROAP-214ENST00000551192 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
TROAP-214ENST00000551192 NUP160Q12769 1436 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms