RNA–Protein interactions for RNA: ENST00000374135.8

GPN2-202, Transcript of GPN-loop GTPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN2, Length 4,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN2-202ENST00000374135 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
GPN2-202ENST00000374135 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
GPN2-202ENST00000374135 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
GPN2-202ENST00000374135 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
GPN2-202ENST00000374135 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
GPN2-202ENST00000374135 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
GPN2-202ENST00000374135 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
GPN2-202ENST00000374135 APLP2Q06481 763 aa22.54■■□□□ 1.2
GPN2-202ENST00000374135 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
GPN2-202ENST00000374135 PELP1Q8IZL8 1130 aaKnown RBP22.31■■□□□ 1.16
GPN2-202ENST00000374135 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
GPN2-202ENST00000374135 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
GPN2-202ENST00000374135 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
GPN2-202ENST00000374135 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
GPN2-202ENST00000374135 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
GPN2-202ENST00000374135 ABCC9O60706 1549 aa21.86■■□□□ 1.09
GPN2-202ENST00000374135 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
GPN2-202ENST00000374135 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
GPN2-202ENST00000374135 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
GPN2-202ENST00000374135 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.08
GPN2-202ENST00000374135 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
GPN2-202ENST00000374135 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
GPN2-202ENST00000374135 YTHDC1Q96MU7 727 aaKnown RBP21.53■■□□□ 1.04
GPN2-202ENST00000374135 HRCP23327 699 aa21.46■■□□□ 1.03
GPN2-202ENST00000374135 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
GPN2-202ENST00000374135 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
GPN2-202ENST00000374135 NEFLP07196 543 aa21.3■■□□□ 1
GPN2-202ENST00000374135 ITGAEP38570 1179 aa21.25■□□□□ 0.99
GPN2-202ENST00000374135 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
GPN2-202ENST00000374135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
GPN2-202ENST00000374135 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
GPN2-202ENST00000374135 CNGB1Q14028 1251 aaPredicted RBP20.91■□□□□ 0.94
GPN2-202ENST00000374135 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
GPN2-202ENST00000374135 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
GPN2-202ENST00000374135 FBLN2P98095 1184 aa20.74■□□□□ 0.91
GPN2-202ENST00000374135 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
GPN2-202ENST00000374135 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
GPN2-202ENST00000374135 MYT1Q01538 1121 aa20.65■□□□□ 0.9
GPN2-202ENST00000374135 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
GPN2-202ENST00000374135 DAXXQ9UER7 740 aaPredicted RBP20.59■□□□□ 0.89
GPN2-202ENST00000374135 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
GPN2-202ENST00000374135 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
GPN2-202ENST00000374135 SLC4A1APQ9BWU0 796 aaKnown RBP20.48■□□□□ 0.87
GPN2-202ENST00000374135 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
GPN2-202ENST00000374135 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
GPN2-202ENST00000374135 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
GPN2-202ENST00000374135 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
GPN2-202ENST00000374135 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
GPN2-202ENST00000374135 BCANQ96GW7 911 aa20.3■□□□□ 0.84
GPN2-202ENST00000374135 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
GPN2-202ENST00000374135 GTF3C3Q9Y5Q9 886 aa20.29■□□□□ 0.84
GPN2-202ENST00000374135 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
GPN2-202ENST00000374135 ANP32CO43423 234 aa20.19■□□□□ 0.82
GPN2-202ENST00000374135 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
GPN2-202ENST00000374135 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
GPN2-202ENST00000374135 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
GPN2-202ENST00000374135 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
GPN2-202ENST00000374135 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
GPN2-202ENST00000374135 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
GPN2-202ENST00000374135 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
GPN2-202ENST00000374135 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
GPN2-202ENST00000374135 NACADO15069 1562 aa19.93■□□□□ 0.78
GPN2-202ENST00000374135 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
GPN2-202ENST00000374135 BCL11AQ9H165 835 aa19.87■□□□□ 0.77
GPN2-202ENST00000374135 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
GPN2-202ENST00000374135 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
GPN2-202ENST00000374135 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
GPN2-202ENST00000374135 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
GPN2-202ENST00000374135 ZBTB47Q9UFB7 747 aaPredicted RBP19.78■□□□□ 0.76
GPN2-202ENST00000374135 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
GPN2-202ENST00000374135 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.75
GPN2-202ENST00000374135 DDX10Q13206 875 aaKnown RBP19.77■□□□□ 0.75
GPN2-202ENST00000374135 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
GPN2-202ENST00000374135 CEP162Q5TB80 1403 aa19.76■□□□□ 0.75
GPN2-202ENST00000374135 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
GPN2-202ENST00000374135 CLIP1P30622 1438 aa19.75■□□□□ 0.75
GPN2-202ENST00000374135 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
GPN2-202ENST00000374135 MIER1Q8N108 512 aa19.74■□□□□ 0.75
GPN2-202ENST00000374135 TONSLQ96HA7 1378 aa19.73■□□□□ 0.75
GPN2-202ENST00000374135 FKBP8Q14318 412 aa19.69■□□□□ 0.74
GPN2-202ENST00000374135 NEFMP07197 916 aa19.67■□□□□ 0.74
GPN2-202ENST00000374135 HNRNPUQ00839 825 aaKnown RBP eCLIP19.67■□□□□ 0.74
GPN2-202ENST00000374135 FAM9BQ8IZU0 186 aa19.64■□□□□ 0.73
GPN2-202ENST00000374135 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
GPN2-202ENST00000374135 NPM2Q86SE8 214 aaKnown RBP19.63■□□□□ 0.73
GPN2-202ENST00000374135 SOGA1O94964 1423 aa19.62■□□□□ 0.73
GPN2-202ENST00000374135 CHGAP10645 457 aaKnown RBP19.62■□□□□ 0.73
GPN2-202ENST00000374135 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
GPN2-202ENST00000374135 ANP32AP39687 249 aaKnown RBP19.61■□□□□ 0.73
GPN2-202ENST00000374135 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
GPN2-202ENST00000374135 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
GPN2-202ENST00000374135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.736e-6■□□□□ 8.3
GPN2-202ENST00000374135 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
GPN2-202ENST00000374135 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
GPN2-202ENST00000374135 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
GPN2-202ENST00000374135 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
GPN2-202ENST00000374135 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
GPN2-202ENST00000374135 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
GPN2-202ENST00000374135 SENP3-EIF4A1A0A087X0R7 540 aa19.5■□□□□ 0.71
GPN2-202ENST00000374135 RRP7BPQ9NSQ0 103 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms