RNA–Protein interactions for RNA: ENST00000585815.5

PRKAR1A-208, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 5

Gene PRKAR1A, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-208ENST00000585815 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
PRKAR1A-208ENST00000585815 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
PRKAR1A-208ENST00000585815 ABCC9O60706 1549 aa17.6■□□□□ 0.41
PRKAR1A-208ENST00000585815 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
PRKAR1A-208ENST00000585815 NACADO15069 1562 aa16.98■□□□□ 0.31
PRKAR1A-208ENST00000585815 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
PRKAR1A-208ENST00000585815 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
PRKAR1A-208ENST00000585815 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
PRKAR1A-208ENST00000585815 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
PRKAR1A-208ENST00000585815 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
PRKAR1A-208ENST00000585815 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRKAR1A-208ENST00000585815 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
PRKAR1A-208ENST00000585815 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
PRKAR1A-208ENST00000585815 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
PRKAR1A-208ENST00000585815 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
PRKAR1A-208ENST00000585815 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
PRKAR1A-208ENST00000585815 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
PRKAR1A-208ENST00000585815 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
PRKAR1A-208ENST00000585815 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
PRKAR1A-208ENST00000585815 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
PRKAR1A-208ENST00000585815 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
PRKAR1A-208ENST00000585815 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
PRKAR1A-208ENST00000585815 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
PRKAR1A-208ENST00000585815 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
PRKAR1A-208ENST00000585815 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
PRKAR1A-208ENST00000585815 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
PRKAR1A-208ENST00000585815 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
PRKAR1A-208ENST00000585815 WIZO95785 1651 aa15.41■□□□□ 0.06
PRKAR1A-208ENST00000585815 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
PRKAR1A-208ENST00000585815 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
PRKAR1A-208ENST00000585815 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
PRKAR1A-208ENST00000585815 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
PRKAR1A-208ENST00000585815 NESP48681 1621 aa15.2■□□□□ 0.02
PRKAR1A-208ENST00000585815 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
PRKAR1A-208ENST00000585815 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
PRKAR1A-208ENST00000585815 CUX2O14529 1486 aa15.08■□□□□ 0.01
PRKAR1A-208ENST00000585815 CFTRP13569 1480 aa15.08■□□□□ 0.01
PRKAR1A-208ENST00000585815 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
PRKAR1A-208ENST00000585815 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
PRKAR1A-208ENST00000585815 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
PRKAR1A-208ENST00000585815 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
PRKAR1A-208ENST00000585815 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
PRKAR1A-208ENST00000585815 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
PRKAR1A-208ENST00000585815 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
PRKAR1A-208ENST00000585815 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
PRKAR1A-208ENST00000585815 WDR62O43379 1518 aa14.92□□□□□ -0.02
PRKAR1A-208ENST00000585815 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
PRKAR1A-208ENST00000585815 URB2Q14146 1524 aaKnown RBP14.82□□□□□ -0.04
PRKAR1A-208ENST00000585815 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
PRKAR1A-208ENST00000585815 TOPBP1Q92547 1522 aa14.75□□□□□ -0.05
PRKAR1A-208ENST00000585815 IFT140Q96RY7 1462 aa14.7□□□□□ -0.06
PRKAR1A-208ENST00000585815 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
PRKAR1A-208ENST00000585815 CUX1P39880 1505 aa14.61□□□□□ -0.07
PRKAR1A-208ENST00000585815 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
PRKAR1A-208ENST00000585815 SOGA1O94964 1423 aa14.58□□□□□ -0.07
PRKAR1A-208ENST00000585815 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
PRKAR1A-208ENST00000585815 TARBP1Q13395 1621 aaKnown RBP14.58□□□□□ -0.08
PRKAR1A-208ENST00000585815 WDR97A6NE52 1622 aa14.56□□□□□ -0.08
PRKAR1A-208ENST00000585815 WRNQ14191 1432 aaPredicted RBP eCLIP14.56□□□□□ -0.08
PRKAR1A-208ENST00000585815 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
PRKAR1A-208ENST00000585815 EIF4G3O43432 1585 aaKnown RBP14.55□□□□□ -0.08
PRKAR1A-208ENST00000585815 BIVM-ERCC5R4GMW8 1640 aa14.53□□□□□ -0.08
PRKAR1A-208ENST00000585815 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
PRKAR1A-208ENST00000585815 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
PRKAR1A-208ENST00000585815 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.09
PRKAR1A-208ENST00000585815 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
PRKAR1A-208ENST00000585815 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
PRKAR1A-208ENST00000585815 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.09
PRKAR1A-208ENST00000585815 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
PRKAR1A-208ENST00000585815 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
PRKAR1A-208ENST00000585815 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
PRKAR1A-208ENST00000585815 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
PRKAR1A-208ENST00000585815 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
PRKAR1A-208ENST00000585815 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
PRKAR1A-208ENST00000585815 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
PRKAR1A-208ENST00000585815 FBLN2P98095 1184 aa14.37□□□□□ -0.11
PRKAR1A-208ENST00000585815 CHD1O14646 1710 aa14.36□□□□□ -0.11
PRKAR1A-208ENST00000585815 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
PRKAR1A-208ENST00000585815 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
PRKAR1A-208ENST00000585815 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
PRKAR1A-208ENST00000585815 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
PRKAR1A-208ENST00000585815 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
PRKAR1A-208ENST00000585815 FHAD1B1AJZ9 1412 aa14.26□□□□□ -0.13
PRKAR1A-208ENST00000585815 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
PRKAR1A-208ENST00000585815 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
PRKAR1A-208ENST00000585815 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
PRKAR1A-208ENST00000585815 CUL7Q14999 1698 aa14.2□□□□□ -0.14
PRKAR1A-208ENST00000585815 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
PRKAR1A-208ENST00000585815 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
PRKAR1A-208ENST00000585815 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
PRKAR1A-208ENST00000585815 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
PRKAR1A-208ENST00000585815 IGF1RP08069 1367 aa14.17□□□□□ -0.14
PRKAR1A-208ENST00000585815 NUP160Q12769 1436 aa14.15□□□□□ -0.14
PRKAR1A-208ENST00000585815 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
PRKAR1A-208ENST00000585815 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
PRKAR1A-208ENST00000585815 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
PRKAR1A-208ENST00000585815 ARAP1Q96P48 1450 aa14.05□□□□□ -0.16
PRKAR1A-208ENST00000585815 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
PRKAR1A-208ENST00000585815 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
PRKAR1A-208ENST00000585815 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms