RNA–Protein interactions for RNA: ENST00000439794.6

CCDC144NL-AS1-205, CCDC144NL antisense RNA 1, humanhuman

TSL 3

Gene CCDC144NL-AS1, Length 481 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-205ENST00000439794 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
CCDC144NL-AS1-205ENST00000439794 CCDC180Q9P1Z9 1646 aa32.42■■■□□ 2.78
CCDC144NL-AS1-205ENST00000439794 ABCC9O60706 1549 aa32.41■■■□□ 2.78
CCDC144NL-AS1-205ENST00000439794 RB1CC1Q8TDY2 1594 aa30.9■■■□□ 2.54
CCDC144NL-AS1-205ENST00000439794 NACADO15069 1562 aa30.66■■■□□ 2.5
CCDC144NL-AS1-205ENST00000439794 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
CCDC144NL-AS1-205ENST00000439794 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
CCDC144NL-AS1-205ENST00000439794 MYO15BQ96JP2 1530 aa30.23■■■□□ 2.43
CCDC144NL-AS1-205ENST00000439794 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
CCDC144NL-AS1-205ENST00000439794 UNC13AQ9UPW8 1703 aa30.07■■■□□ 2.4
CCDC144NL-AS1-205ENST00000439794 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
CCDC144NL-AS1-205ENST00000439794 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
CCDC144NL-AS1-205ENST00000439794 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
CCDC144NL-AS1-205ENST00000439794 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
CCDC144NL-AS1-205ENST00000439794 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
CCDC144NL-AS1-205ENST00000439794 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
CCDC144NL-AS1-205ENST00000439794 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
CCDC144NL-AS1-205ENST00000439794 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
CCDC144NL-AS1-205ENST00000439794 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
CCDC144NL-AS1-205ENST00000439794 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
CCDC144NL-AS1-205ENST00000439794 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
CCDC144NL-AS1-205ENST00000439794 SMARCA4P51532 1647 aa28.14■■■□□ 2.09
CCDC144NL-AS1-205ENST00000439794 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
CCDC144NL-AS1-205ENST00000439794 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
CCDC144NL-AS1-205ENST00000439794 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
CCDC144NL-AS1-205ENST00000439794 CUX2O14529 1486 aa28.03■■■□□ 2.08
CCDC144NL-AS1-205ENST00000439794 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
CCDC144NL-AS1-205ENST00000439794 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
CCDC144NL-AS1-205ENST00000439794 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
CCDC144NL-AS1-205ENST00000439794 NESP48681 1621 aa27.79■■■□□ 2.04
CCDC144NL-AS1-205ENST00000439794 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
CCDC144NL-AS1-205ENST00000439794 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
CCDC144NL-AS1-205ENST00000439794 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
CCDC144NL-AS1-205ENST00000439794 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
CCDC144NL-AS1-205ENST00000439794 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.98
CCDC144NL-AS1-205ENST00000439794 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
CCDC144NL-AS1-205ENST00000439794 WIZO95785 1651 aa27.4■■□□□ 1.98
CCDC144NL-AS1-205ENST00000439794 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
CCDC144NL-AS1-205ENST00000439794 WDR62O43379 1518 aa27.2■■□□□ 1.94
CCDC144NL-AS1-205ENST00000439794 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
CCDC144NL-AS1-205ENST00000439794 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
CCDC144NL-AS1-205ENST00000439794 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
CCDC144NL-AS1-205ENST00000439794 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
CCDC144NL-AS1-205ENST00000439794 CFTRP13569 1480 aa27.09■■□□□ 1.93
CCDC144NL-AS1-205ENST00000439794 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
CCDC144NL-AS1-205ENST00000439794 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
CCDC144NL-AS1-205ENST00000439794 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
CCDC144NL-AS1-205ENST00000439794 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
CCDC144NL-AS1-205ENST00000439794 OSCARQ8IYS5 282 aa26.72■■□□□ 1.87
CCDC144NL-AS1-205ENST00000439794 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
CCDC144NL-AS1-205ENST00000439794 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
CCDC144NL-AS1-205ENST00000439794 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
CCDC144NL-AS1-205ENST00000439794 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
CCDC144NL-AS1-205ENST00000439794 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
CCDC144NL-AS1-205ENST00000439794 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
CCDC144NL-AS1-205ENST00000439794 RIMBP3CA6NJZ7 1639 aa26.34■■□□□ 1.81
CCDC144NL-AS1-205ENST00000439794 RIMBP3BA6NNM3 1639 aa26.34■■□□□ 1.81
CCDC144NL-AS1-205ENST00000439794 RIMBP3Q9UFD9 1639 aa26.34■■□□□ 1.81
CCDC144NL-AS1-205ENST00000439794 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
CCDC144NL-AS1-205ENST00000439794 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
CCDC144NL-AS1-205ENST00000439794 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.8
CCDC144NL-AS1-205ENST00000439794 ARHGEF11O15085 1522 aa26.27■■□□□ 1.8
CCDC144NL-AS1-205ENST00000439794 SOGA1O94964 1423 aa26.21■■□□□ 1.79
CCDC144NL-AS1-205ENST00000439794 CHD1O14646 1710 aa26.2■■□□□ 1.79
CCDC144NL-AS1-205ENST00000439794 FBLN2P98095 1184 aa26.18■■□□□ 1.78
CCDC144NL-AS1-205ENST00000439794 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
CCDC144NL-AS1-205ENST00000439794 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
CCDC144NL-AS1-205ENST00000439794 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
CCDC144NL-AS1-205ENST00000439794 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
CCDC144NL-AS1-205ENST00000439794 CUX1P39880 1505 aa26.09■■□□□ 1.77
CCDC144NL-AS1-205ENST00000439794 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
CCDC144NL-AS1-205ENST00000439794 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
CCDC144NL-AS1-205ENST00000439794 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
CCDC144NL-AS1-205ENST00000439794 GRIN2BQ13224 1484 aa26.01■■□□□ 1.75
CCDC144NL-AS1-205ENST00000439794 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
CCDC144NL-AS1-205ENST00000439794 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
CCDC144NL-AS1-205ENST00000439794 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
CCDC144NL-AS1-205ENST00000439794 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
CCDC144NL-AS1-205ENST00000439794 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
CCDC144NL-AS1-205ENST00000439794 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
CCDC144NL-AS1-205ENST00000439794 GAPVD1Q14C86 1478 aa25.89■■□□□ 1.73
CCDC144NL-AS1-205ENST00000439794 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
CCDC144NL-AS1-205ENST00000439794 ABCA10Q8WWZ4 1543 aa25.85■■□□□ 1.73
CCDC144NL-AS1-205ENST00000439794 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
CCDC144NL-AS1-205ENST00000439794 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
CCDC144NL-AS1-205ENST00000439794 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.72
CCDC144NL-AS1-205ENST00000439794 TOP2BQ02880 1626 aa25.69■■□□□ 1.7
CCDC144NL-AS1-205ENST00000439794 BIVM-ERCC5R4GMW8 1640 aa25.68■■□□□ 1.7
CCDC144NL-AS1-205ENST00000439794 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
CCDC144NL-AS1-205ENST00000439794 ADAMTS12P58397 1594 aa25.63■■□□□ 1.69
CCDC144NL-AS1-205ENST00000439794 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
CCDC144NL-AS1-205ENST00000439794 NUP160Q12769 1436 aa25.55■■□□□ 1.68
CCDC144NL-AS1-205ENST00000439794 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
CCDC144NL-AS1-205ENST00000439794 CEP170Q5SW79 1584 aa25.53■■□□□ 1.68
CCDC144NL-AS1-205ENST00000439794 ERCC6L2Q5T890 1561 aa25.45■■□□□ 1.66
CCDC144NL-AS1-205ENST00000439794 SHROOM2Q13796 1616 aa25.45■■□□□ 1.66
CCDC144NL-AS1-205ENST00000439794 PRG4Q92954 1404 aaPredicted RBP25.32■■□□□ 1.64
CCDC144NL-AS1-205ENST00000439794 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
CCDC144NL-AS1-205ENST00000439794 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
CCDC144NL-AS1-205ENST00000439794 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms