RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
TROAP-212ENST00000550346 CCDC180Q9P1Z9 1646 aa27.14■■□□□ 1.94
TROAP-212ENST00000550346 ABCC9O60706 1549 aa26.37■■□□□ 1.81
TROAP-212ENST00000550346 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
TROAP-212ENST00000550346 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
TROAP-212ENST00000550346 NACADO15069 1562 aa25.52■■□□□ 1.68
TROAP-212ENST00000550346 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
TROAP-212ENST00000550346 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
TROAP-212ENST00000550346 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
TROAP-212ENST00000550346 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
TROAP-212ENST00000550346 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
TROAP-212ENST00000550346 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
TROAP-212ENST00000550346 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
TROAP-212ENST00000550346 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
TROAP-212ENST00000550346 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
TROAP-212ENST00000550346 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
TROAP-212ENST00000550346 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
TROAP-212ENST00000550346 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
TROAP-212ENST00000550346 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
TROAP-212ENST00000550346 SMARCA4P51532 1647 aa23.75■■□□□ 1.39
TROAP-212ENST00000550346 MROH2BQ7Z745 1585 aa23.66■■□□□ 1.38
TROAP-212ENST00000550346 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
TROAP-212ENST00000550346 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
TROAP-212ENST00000550346 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
TROAP-212ENST00000550346 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
TROAP-212ENST00000550346 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
TROAP-212ENST00000550346 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
TROAP-212ENST00000550346 WIZO95785 1651 aa23.43■■□□□ 1.34
TROAP-212ENST00000550346 HMGXB3Q12766 1538 aa23.39■■□□□ 1.34
TROAP-212ENST00000550346 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
TROAP-212ENST00000550346 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
TROAP-212ENST00000550346 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
TROAP-212ENST00000550346 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
TROAP-212ENST00000550346 NESP48681 1621 aa22.86■■□□□ 1.25
TROAP-212ENST00000550346 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
TROAP-212ENST00000550346 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
TROAP-212ENST00000550346 CFTRP13569 1480 aa22.78■■□□□ 1.24
TROAP-212ENST00000550346 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
TROAP-212ENST00000550346 FANCD2Q9BXW9 1451 aa22.62■■□□□ 1.21
TROAP-212ENST00000550346 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
TROAP-212ENST00000550346 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
TROAP-212ENST00000550346 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
TROAP-212ENST00000550346 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
TROAP-212ENST00000550346 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
TROAP-212ENST00000550346 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
TROAP-212ENST00000550346 CUX2O14529 1486 aa22.34■■□□□ 1.17
TROAP-212ENST00000550346 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
TROAP-212ENST00000550346 WDR62O43379 1518 aa22.31■■□□□ 1.16
TROAP-212ENST00000550346 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
TROAP-212ENST00000550346 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
TROAP-212ENST00000550346 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
TROAP-212ENST00000550346 CUX1P39880 1505 aa22.17■■□□□ 1.14
TROAP-212ENST00000550346 SOGA1O94964 1423 aa22.11■■□□□ 1.13
TROAP-212ENST00000550346 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
TROAP-212ENST00000550346 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
TROAP-212ENST00000550346 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
TROAP-212ENST00000550346 TOP2BQ02880 1626 aa22.08■■□□□ 1.13
TROAP-212ENST00000550346 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
TROAP-212ENST00000550346 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
TROAP-212ENST00000550346 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
TROAP-212ENST00000550346 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
TROAP-212ENST00000550346 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
TROAP-212ENST00000550346 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
TROAP-212ENST00000550346 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
TROAP-212ENST00000550346 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
TROAP-212ENST00000550346 ZNF608Q9ULD9 1512 aaPredicted RBP21.91■■□□□ 1.1
TROAP-212ENST00000550346 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.12e-7■■■■□ 21.9
TROAP-212ENST00000550346 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
TROAP-212ENST00000550346 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
TROAP-212ENST00000550346 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
TROAP-212ENST00000550346 EIF4G3O43432 1585 aaKnown RBP21.81■■□□□ 1.08
TROAP-212ENST00000550346 KIF27Q86VH2 1401 aa21.78■■□□□ 1.08
TROAP-212ENST00000550346 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
TROAP-212ENST00000550346 FBLN2P98095 1184 aa21.76■■□□□ 1.07
TROAP-212ENST00000550346 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
TROAP-212ENST00000550346 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
TROAP-212ENST00000550346 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
TROAP-212ENST00000550346 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
TROAP-212ENST00000550346 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
TROAP-212ENST00000550346 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
TROAP-212ENST00000550346 ERICH3Q5RHP9 1530 aa21.64■■□□□ 1.05
TROAP-212ENST00000550346 IGF1RP08069 1367 aa21.63■■□□□ 1.05
TROAP-212ENST00000550346 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
TROAP-212ENST00000550346 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
TROAP-212ENST00000550346 FHAD1B1AJZ9 1412 aa21.58■■□□□ 1.05
TROAP-212ENST00000550346 SYNJ2O15056 1496 aa21.58■■□□□ 1.04
TROAP-212ENST00000550346 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
TROAP-212ENST00000550346 EEA1Q15075 1411 aa21.55■■□□□ 1.04
TROAP-212ENST00000550346 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
TROAP-212ENST00000550346 CHD1O14646 1710 aa21.51■■□□□ 1.03
TROAP-212ENST00000550346 CUL7Q14999 1698 aa21.5■■□□□ 1.03
TROAP-212ENST00000550346 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
TROAP-212ENST00000550346 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
TROAP-212ENST00000550346 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
TROAP-212ENST00000550346 PRXQ9BXM0 1461 aa21.33■■□□□ 1.01
TROAP-212ENST00000550346 NUP160Q12769 1436 aa21.31■■□□□ 1
TROAP-212ENST00000550346 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
TROAP-212ENST00000550346 UBTFP17480 764 aaKnown RBP21.29■■□□□ 1
TROAP-212ENST00000550346 JPH4Q96JJ6 628 aa21.28■■□□□ 1
TROAP-212ENST00000550346 CEP170Q5SW79 1584 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms