RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
TROAP-203ENST00000546735 ABCC9O60706 1549 aa31.88■■■□□ 2.69
TROAP-203ENST00000546735 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
TROAP-203ENST00000546735 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
TROAP-203ENST00000546735 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
TROAP-203ENST00000546735 NACADO15069 1562 aa30.11■■■□□ 2.41
TROAP-203ENST00000546735 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
TROAP-203ENST00000546735 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
TROAP-203ENST00000546735 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
TROAP-203ENST00000546735 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
TROAP-203ENST00000546735 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
TROAP-203ENST00000546735 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.31
TROAP-203ENST00000546735 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
TROAP-203ENST00000546735 SCRIBQ14160 1630 aa29.14■■■□□ 2.26
TROAP-203ENST00000546735 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
TROAP-203ENST00000546735 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
TROAP-203ENST00000546735 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
TROAP-203ENST00000546735 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
TROAP-203ENST00000546735 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
TROAP-203ENST00000546735 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
TROAP-203ENST00000546735 SMARCA4P51532 1647 aa27.78■■■□□ 2.04
TROAP-203ENST00000546735 SMARCA2P51531 1590 aa27.67■■■□□ 2.02
TROAP-203ENST00000546735 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
TROAP-203ENST00000546735 HMGXB3Q12766 1538 aa27.61■■■□□ 2.01
TROAP-203ENST00000546735 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
TROAP-203ENST00000546735 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
TROAP-203ENST00000546735 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
TROAP-203ENST00000546735 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
TROAP-203ENST00000546735 NESP48681 1621 aa27.42■■□□□ 1.98
TROAP-203ENST00000546735 CUX2O14529 1486 aa27.32■■□□□ 1.96
TROAP-203ENST00000546735 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
TROAP-203ENST00000546735 WIZO95785 1651 aa27.17■■□□□ 1.94
TROAP-203ENST00000546735 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
TROAP-203ENST00000546735 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
TROAP-203ENST00000546735 PDS5BQ9NTI5 1447 aa27.02■■□□□ 1.92
TROAP-203ENST00000546735 CADPSQ9ULU8 1353 aa27.01■■□□□ 1.91
TROAP-203ENST00000546735 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
TROAP-203ENST00000546735 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
TROAP-203ENST00000546735 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
TROAP-203ENST00000546735 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
TROAP-203ENST00000546735 CFTRP13569 1480 aa26.72■■□□□ 1.87
TROAP-203ENST00000546735 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
TROAP-203ENST00000546735 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
TROAP-203ENST00000546735 WDR62O43379 1518 aa26.7■■□□□ 1.87
TROAP-203ENST00000546735 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
TROAP-203ENST00000546735 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
TROAP-203ENST00000546735 PRDM2Q13029 1718 aa26.37■■□□□ 1.81
TROAP-203ENST00000546735 TOPBP1Q92547 1522 aa26.22■■□□□ 1.79
TROAP-203ENST00000546735 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
TROAP-203ENST00000546735 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
TROAP-203ENST00000546735 TRIM41Q8WV44 630 aa26.16■■□□□ 1.78
TROAP-203ENST00000546735 OSCARQ8IYS5 282 aa26.15■■□□□ 1.78
TROAP-203ENST00000546735 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
TROAP-203ENST00000546735 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
TROAP-203ENST00000546735 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
TROAP-203ENST00000546735 SUPT5HO00267 1087 aaKnown RBP25.98■■□□□ 1.75
TROAP-203ENST00000546735 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
TROAP-203ENST00000546735 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.751e-7■■■■■ 63.9
TROAP-203ENST00000546735 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
TROAP-203ENST00000546735 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
TROAP-203ENST00000546735 SOGA1O94964 1423 aa25.86■■□□□ 1.73
TROAP-203ENST00000546735 FGD5Q6ZNL6 1462 aa25.84■■□□□ 1.73
TROAP-203ENST00000546735 CUX1P39880 1505 aa25.83■■□□□ 1.72
TROAP-203ENST00000546735 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
TROAP-203ENST00000546735 FBLN2P98095 1184 aa25.79■■□□□ 1.72
TROAP-203ENST00000546735 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
TROAP-203ENST00000546735 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
TROAP-203ENST00000546735 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
TROAP-203ENST00000546735 CHD1O14646 1710 aa25.74■■□□□ 1.71
TROAP-203ENST00000546735 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
TROAP-203ENST00000546735 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
TROAP-203ENST00000546735 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
TROAP-203ENST00000546735 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
TROAP-203ENST00000546735 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
TROAP-203ENST00000546735 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
TROAP-203ENST00000546735 MAGI1Q96QZ7 1491 aaPredicted RBP25.55■■□□□ 1.68
TROAP-203ENST00000546735 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
TROAP-203ENST00000546735 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
TROAP-203ENST00000546735 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
TROAP-203ENST00000546735 SYNJ2O15056 1496 aa25.49■■□□□ 1.67
TROAP-203ENST00000546735 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
TROAP-203ENST00000546735 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
TROAP-203ENST00000546735 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.67
TROAP-203ENST00000546735 SYNJ1O43426 1573 aa25.45■■□□□ 1.66
TROAP-203ENST00000546735 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
TROAP-203ENST00000546735 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
TROAP-203ENST00000546735 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
TROAP-203ENST00000546735 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
TROAP-203ENST00000546735 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
TROAP-203ENST00000546735 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
TROAP-203ENST00000546735 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
TROAP-203ENST00000546735 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
TROAP-203ENST00000546735 NUP160Q12769 1436 aa25.18■■□□□ 1.62
TROAP-203ENST00000546735 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
TROAP-203ENST00000546735 ERCC6L2Q5T890 1561 aa25.14■■□□□ 1.62
TROAP-203ENST00000546735 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
TROAP-203ENST00000546735 PRG4Q92954 1404 aaPredicted RBP24.96■■□□□ 1.59
TROAP-203ENST00000546735 JPH4Q96JJ6 628 aa24.95■■□□□ 1.58
TROAP-203ENST00000546735 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
TROAP-203ENST00000546735 IGF1RP08069 1367 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms