RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 NISCHQ9Y2I1 1504 aa22.42■■□□□ 1.18
TROAP-201ENST00000257909 HRCP23327 699 aa19.36■□□□□ 0.69
TROAP-201ENST00000257909 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
TROAP-201ENST00000257909 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
TROAP-201ENST00000257909 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
TROAP-201ENST00000257909 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
TROAP-201ENST00000257909 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
TROAP-201ENST00000257909 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
TROAP-201ENST00000257909 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
TROAP-201ENST00000257909 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
TROAP-201ENST00000257909 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
TROAP-201ENST00000257909 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
TROAP-201ENST00000257909 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
TROAP-201ENST00000257909 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
TROAP-201ENST00000257909 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
TROAP-201ENST00000257909 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
TROAP-201ENST00000257909 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
TROAP-201ENST00000257909 ABCC9O60706 1549 aa18.04■□□□□ 0.48
TROAP-201ENST00000257909 MYT1Q01538 1121 aa17.97■□□□□ 0.47
TROAP-201ENST00000257909 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
TROAP-201ENST00000257909 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
TROAP-201ENST00000257909 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
TROAP-201ENST00000257909 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
TROAP-201ENST00000257909 RB1CC1Q8TDY2 1594 aa17.77■□□□□ 0.44
TROAP-201ENST00000257909 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
TROAP-201ENST00000257909 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
TROAP-201ENST00000257909 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
TROAP-201ENST00000257909 GTF3C3Q9Y5Q9 886 aa17.63■□□□□ 0.41
TROAP-201ENST00000257909 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
TROAP-201ENST00000257909 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
TROAP-201ENST00000257909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
TROAP-201ENST00000257909 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
TROAP-201ENST00000257909 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
TROAP-201ENST00000257909 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
TROAP-201ENST00000257909 WIZO95785 1651 aa17.45■□□□□ 0.38
TROAP-201ENST00000257909 NACADO15069 1562 aa17.45■□□□□ 0.38
TROAP-201ENST00000257909 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
TROAP-201ENST00000257909 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
TROAP-201ENST00000257909 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
TROAP-201ENST00000257909 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
TROAP-201ENST00000257909 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
TROAP-201ENST00000257909 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
TROAP-201ENST00000257909 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
TROAP-201ENST00000257909 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
TROAP-201ENST00000257909 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
TROAP-201ENST00000257909 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
TROAP-201ENST00000257909 MIER1Q8N108 512 aa17.1■□□□□ 0.33
TROAP-201ENST00000257909 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
TROAP-201ENST00000257909 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
TROAP-201ENST00000257909 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
TROAP-201ENST00000257909 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
TROAP-201ENST00000257909 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
TROAP-201ENST00000257909 EEA1Q15075 1411 aa17.04■□□□□ 0.32
TROAP-201ENST00000257909 SOGA1O94964 1423 aa16.94■□□□□ 0.3
TROAP-201ENST00000257909 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
TROAP-201ENST00000257909 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
TROAP-201ENST00000257909 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
TROAP-201ENST00000257909 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
TROAP-201ENST00000257909 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
TROAP-201ENST00000257909 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
TROAP-201ENST00000257909 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
TROAP-201ENST00000257909 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
TROAP-201ENST00000257909 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.28
TROAP-201ENST00000257909 KIF21BO75037 1637 aa16.76■□□□□ 0.27
TROAP-201ENST00000257909 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
TROAP-201ENST00000257909 CLIP1P30622 1438 aa16.73■□□□□ 0.27
TROAP-201ENST00000257909 TSHZ2Q9NRE2 1034 aa16.73■□□□□ 0.27
TROAP-201ENST00000257909 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
TROAP-201ENST00000257909 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
TROAP-201ENST00000257909 APLP2Q06481 763 aa16.71■□□□□ 0.27
TROAP-201ENST00000257909 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
TROAP-201ENST00000257909 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
TROAP-201ENST00000257909 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
TROAP-201ENST00000257909 BCL11AQ9H165 835 aa16.58■□□□□ 0.25
TROAP-201ENST00000257909 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
TROAP-201ENST00000257909 RAPGEF2Q9Y4G8 1499 aa16.52■□□□□ 0.24
TROAP-201ENST00000257909 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
TROAP-201ENST00000257909 CUX2O14529 1486 aa16.48■□□□□ 0.23
TROAP-201ENST00000257909 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
TROAP-201ENST00000257909 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
TROAP-201ENST00000257909 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
TROAP-201ENST00000257909 FKBP8Q14318 412 aa16.4■□□□□ 0.22
TROAP-201ENST00000257909 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
TROAP-201ENST00000257909 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
TROAP-201ENST00000257909 BCANQ96GW7 911 aa16.38■□□□□ 0.21
TROAP-201ENST00000257909 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
TROAP-201ENST00000257909 NEFLP07196 543 aa16.37■□□□□ 0.21
TROAP-201ENST00000257909 RBM19Q9Y4C8 960 aaKnown RBP16.37■□□□□ 0.21
TROAP-201ENST00000257909 RANGAP1P46060 587 aaPredicted RBP16.36■□□□□ 0.21
TROAP-201ENST00000257909 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
TROAP-201ENST00000257909 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
TROAP-201ENST00000257909 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
TROAP-201ENST00000257909 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
TROAP-201ENST00000257909 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
TROAP-201ENST00000257909 CUX1P39880 1505 aa16.26■□□□□ 0.19
TROAP-201ENST00000257909 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
TROAP-201ENST00000257909 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
TROAP-201ENST00000257909 PPP1R15AO75807 674 aaPredicted RBP16.22■□□□□ 0.19
TROAP-201ENST00000257909 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
TROAP-201ENST00000257909 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms