RNA–Protein interactions for RNA: ENST00000547807.5

TROAP-205, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-205ENST00000547807 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
TROAP-205ENST00000547807 ABCC9O60706 1549 aa24.76■■□□□ 1.55
TROAP-205ENST00000547807 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
TROAP-205ENST00000547807 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
TROAP-205ENST00000547807 RB1CC1Q8TDY2 1594 aa23.15■■□□□ 1.3
TROAP-205ENST00000547807 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
TROAP-205ENST00000547807 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
TROAP-205ENST00000547807 NACADO15069 1562 aa22.74■■□□□ 1.23
TROAP-205ENST00000547807 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
TROAP-205ENST00000547807 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
TROAP-205ENST00000547807 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
TROAP-205ENST00000547807 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
TROAP-205ENST00000547807 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
TROAP-205ENST00000547807 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
TROAP-205ENST00000547807 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
TROAP-205ENST00000547807 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
TROAP-205ENST00000547807 CUX2O14529 1486 aa21.77■■□□□ 1.08
TROAP-205ENST00000547807 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
TROAP-205ENST00000547807 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
TROAP-205ENST00000547807 ERCC6Q03468 1493 aa21.45■■□□□ 1.03
TROAP-205ENST00000547807 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
TROAP-205ENST00000547807 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1.01
TROAP-205ENST00000547807 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.95
TROAP-205ENST00000547807 NESP48681 1621 aa20.98■□□□□ 0.95
TROAP-205ENST00000547807 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
TROAP-205ENST00000547807 SMARCA2P51531 1590 aa20.79■□□□□ 0.92
TROAP-205ENST00000547807 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
TROAP-205ENST00000547807 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
TROAP-205ENST00000547807 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
TROAP-205ENST00000547807 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
TROAP-205ENST00000547807 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
TROAP-205ENST00000547807 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
TROAP-205ENST00000547807 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
TROAP-205ENST00000547807 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
TROAP-205ENST00000547807 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
TROAP-205ENST00000547807 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
TROAP-205ENST00000547807 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
TROAP-205ENST00000547807 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
TROAP-205ENST00000547807 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
TROAP-205ENST00000547807 WDR62O43379 1518 aa20.48■□□□□ 0.87
TROAP-205ENST00000547807 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
TROAP-205ENST00000547807 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
TROAP-205ENST00000547807 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
TROAP-205ENST00000547807 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
TROAP-205ENST00000547807 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
TROAP-205ENST00000547807 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
TROAP-205ENST00000547807 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
TROAP-205ENST00000547807 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
TROAP-205ENST00000547807 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
TROAP-205ENST00000547807 ARAP1Q96P48 1450 aa20.01■□□□□ 0.79
TROAP-205ENST00000547807 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
TROAP-205ENST00000547807 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
TROAP-205ENST00000547807 CFTRP13569 1480 aa19.85■□□□□ 0.77
TROAP-205ENST00000547807 CHD1O14646 1710 aa19.84■□□□□ 0.77
TROAP-205ENST00000547807 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
TROAP-205ENST00000547807 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
TROAP-205ENST00000547807 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
TROAP-205ENST00000547807 WIZO95785 1651 aa19.76■□□□□ 0.75
TROAP-205ENST00000547807 ILDR1Q86SU0 546 aaPredicted RBP19.74■□□□□ 0.75
TROAP-205ENST00000547807 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
TROAP-205ENST00000547807 FBLN2P98095 1184 aa19.63■□□□□ 0.73
TROAP-205ENST00000547807 TOPBP1Q92547 1522 aa19.58■□□□□ 0.73
TROAP-205ENST00000547807 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.722e-7■■■■□ 21.9
TROAP-205ENST00000547807 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
TROAP-205ENST00000547807 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
TROAP-205ENST00000547807 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
TROAP-205ENST00000547807 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
TROAP-205ENST00000547807 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
TROAP-205ENST00000547807 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
TROAP-205ENST00000547807 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
TROAP-205ENST00000547807 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TROAP-205ENST00000547807 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
TROAP-205ENST00000547807 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
TROAP-205ENST00000547807 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
TROAP-205ENST00000547807 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
TROAP-205ENST00000547807 KDM4FA0A1W2PPD8 638 aa19.27■□□□□ 0.68
TROAP-205ENST00000547807 MAGI1Q96QZ7 1491 aaPredicted RBP19.27■□□□□ 0.67
TROAP-205ENST00000547807 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
TROAP-205ENST00000547807 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
TROAP-205ENST00000547807 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
TROAP-205ENST00000547807 SOGA1O94964 1423 aa19.19■□□□□ 0.66
TROAP-205ENST00000547807 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
TROAP-205ENST00000547807 ERCC6L2Q5T890 1561 aa19.16■□□□□ 0.66
TROAP-205ENST00000547807 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
TROAP-205ENST00000547807 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
TROAP-205ENST00000547807 KDM6BO15054 1643 aa19.07■□□□□ 0.64
TROAP-205ENST00000547807 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
TROAP-205ENST00000547807 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
TROAP-205ENST00000547807 FAM69CQ0P6D2 419 aa19.01■□□□□ 0.63
TROAP-205ENST00000547807 ABCC10Q5T3U5 1492 aa19.01■□□□□ 0.63
TROAP-205ENST00000547807 HECW2Q9P2P5 1572 aa19■□□□□ 0.63
TROAP-205ENST00000547807 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
TROAP-205ENST00000547807 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
TROAP-205ENST00000547807 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
TROAP-205ENST00000547807 FBXO41Q8TF61 875 aa18.92■□□□□ 0.62
TROAP-205ENST00000547807 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
TROAP-205ENST00000547807 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
TROAP-205ENST00000547807 ADGRL1O94910 1474 aa18.9■□□□□ 0.62
TROAP-205ENST00000547807 MAPKBP1O60336 1514 aa18.9■□□□□ 0.62
TROAP-205ENST00000547807 NUP160Q12769 1436 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms