RNA–Protein interactions for RNA: ENST00000381019.3

TRMU-202, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene TRMU, Length 1,381 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-202ENST00000381019 NISCHQ9Y2I1 1504 aa46.68■■■■■ 5.06
TRMU-202ENST00000381019 CCDC180Q9P1Z9 1646 aa41.17■■■■■ 4.18
TRMU-202ENST00000381019 ABCC9O60706 1549 aa39.84■■■■□ 3.97
TRMU-202ENST00000381019 ZCCHC6Q5VYS8 1495 aaKnown RBP39■■■■□ 3.83
TRMU-202ENST00000381019 DCAF8L2P0C7V8 631 aa38.89■■■■□ 3.82
TRMU-202ENST00000381019 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
TRMU-202ENST00000381019 NACADO15069 1562 aa38.67■■■■□ 3.78
TRMU-202ENST00000381019 MYO15BQ96JP2 1530 aa38.65■■■■□ 3.78
TRMU-202ENST00000381019 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.76
TRMU-202ENST00000381019 SCRIBQ14160 1630 aa37.64■■■■□ 3.62
TRMU-202ENST00000381019 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
TRMU-202ENST00000381019 PABPN1Q86U42 306 aaKnown RBP eCLIP37.38■■■■□ 3.57
TRMU-202ENST00000381019 BICRAQ9NZM4 1560 aa37.28■■■■□ 3.56
TRMU-202ENST00000381019 SHROOM4Q9ULL8 1493 aa37.24■■■■□ 3.55
TRMU-202ENST00000381019 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.43
TRMU-202ENST00000381019 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
TRMU-202ENST00000381019 CECR2Q9BXF3 1484 aa36.28■■■■□ 3.4
TRMU-202ENST00000381019 BAZ1AQ9NRL2 1556 aaPredicted RBP36.17■■■■□ 3.38
TRMU-202ENST00000381019 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
TRMU-202ENST00000381019 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.36
TRMU-202ENST00000381019 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
TRMU-202ENST00000381019 RSF1Q96T23 1441 aaPredicted RBP35.8■■■■□ 3.32
TRMU-202ENST00000381019 ATAD2BQ9ULI0 1458 aa35.79■■■■□ 3.32
TRMU-202ENST00000381019 SMARCA2P51531 1590 aa35.78■■■■□ 3.32
TRMU-202ENST00000381019 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
TRMU-202ENST00000381019 NCAPD3P42695 1498 aa35.71■■■■□ 3.31
TRMU-202ENST00000381019 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
TRMU-202ENST00000381019 HMGXB3Q12766 1538 aa35.54■■■■□ 3.28
TRMU-202ENST00000381019 WIZO95785 1651 aa35.52■■■■□ 3.28
TRMU-202ENST00000381019 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
TRMU-202ENST00000381019 TOP2AP11388 1531 aaKnown RBP35.28■■■■□ 3.24
TRMU-202ENST00000381019 CCDC88BA6NC98 1476 aa34.88■■■■□ 3.17
TRMU-202ENST00000381019 CADPSQ9ULU8 1353 aa34.73■■■■□ 3.15
TRMU-202ENST00000381019 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
TRMU-202ENST00000381019 CFTRP13569 1480 aa34.6■■■■□ 3.13
TRMU-202ENST00000381019 NESP48681 1621 aa34.6■■■■□ 3.13
TRMU-202ENST00000381019 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
TRMU-202ENST00000381019 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
TRMU-202ENST00000381019 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
TRMU-202ENST00000381019 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.07
TRMU-202ENST00000381019 PRDM2Q13029 1718 aa34.15■■■■□ 3.06
TRMU-202ENST00000381019 KIF21AQ7Z4S6 1674 aa34.08■■■■□ 3.05
TRMU-202ENST00000381019 MRC2Q9UBG0 1479 aa34.03■■■■□ 3.04
TRMU-202ENST00000381019 CUX2O14529 1486 aa33.99■■■■□ 3.03
TRMU-202ENST00000381019 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
TRMU-202ENST00000381019 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
TRMU-202ENST00000381019 URB2Q14146 1524 aaKnown RBP33.86■■■■□ 3.01
TRMU-202ENST00000381019 WDR62O43379 1518 aa33.86■■■■□ 3.01
TRMU-202ENST00000381019 TOPBP1Q92547 1522 aa33.78■■■■□ 3
TRMU-202ENST00000381019 WRNQ14191 1432 aaPredicted RBP eCLIP33.78■■■■□ 3
TRMU-202ENST00000381019 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
TRMU-202ENST00000381019 CUX1P39880 1505 aa33.69■■■□□ 2.98
TRMU-202ENST00000381019 TOP2BQ02880 1626 aa33.55■■■□□ 2.96
TRMU-202ENST00000381019 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
TRMU-202ENST00000381019 POLA1P09884 1462 aaPredicted RBP33.53■■■□□ 2.96
TRMU-202ENST00000381019 FGD5Q6ZNL6 1462 aa33.53■■■□□ 2.96
TRMU-202ENST00000381019 BIVM-ERCC5R4GMW8 1640 aa33.49■■■□□ 2.95
TRMU-202ENST00000381019 IFT140Q96RY7 1462 aa33.49■■■□□ 2.95
TRMU-202ENST00000381019 SOGA1O94964 1423 aa33.46■■■□□ 2.95
TRMU-202ENST00000381019 TRIM41Q8WV44 630 aa33.43■■■□□ 2.94
TRMU-202ENST00000381019 DNAJC5Q9H3Z4 198 aa33.43■■■□□ 2.94
TRMU-202ENST00000381019 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
TRMU-202ENST00000381019 CHIC1Q5VXU3 224 aa33.32■■■□□ 2.92
TRMU-202ENST00000381019 TARBP1Q13395 1621 aaKnown RBP33.29■■■□□ 2.92
TRMU-202ENST00000381019 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.91
TRMU-202ENST00000381019 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
TRMU-202ENST00000381019 TDRD9Q8NDG6 1382 aaKnown RBP33.19■■■□□ 2.9
TRMU-202ENST00000381019 WDR97A6NE52 1622 aa33.14■■■□□ 2.9
TRMU-202ENST00000381019 AQRO60306 1485 aaKnown RBP eCLIP33.13■■■□□ 2.894e-7■■■■□ 21
TRMU-202ENST00000381019 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
TRMU-202ENST00000381019 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
TRMU-202ENST00000381019 KIF27Q86VH2 1401 aa33.06■■■□□ 2.88
TRMU-202ENST00000381019 GRIN2BQ13224 1484 aa33■■■□□ 2.87
TRMU-202ENST00000381019 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
TRMU-202ENST00000381019 ERICH3Q5RHP9 1530 aa32.86■■■□□ 2.85
TRMU-202ENST00000381019 MAGI1Q96QZ7 1491 aaPredicted RBP32.85■■■□□ 2.85
TRMU-202ENST00000381019 SNAPC4Q5SXM2 1469 aa32.84■■■□□ 2.85
TRMU-202ENST00000381019 IGF1RP08069 1367 aa32.83■■■□□ 2.85
TRMU-202ENST00000381019 EEA1Q15075 1411 aa32.82■■■□□ 2.84
TRMU-202ENST00000381019 RUSC2Q8N2Y8 1516 aa32.79■■■□□ 2.84
TRMU-202ENST00000381019 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
TRMU-202ENST00000381019 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
TRMU-202ENST00000381019 CHMP7Q8WUX9 453 aaPredicted RBP32.72■■■□□ 2.83
TRMU-202ENST00000381019 FBLN2P98095 1184 aa32.71■■■□□ 2.83
TRMU-202ENST00000381019 SYNJ2O15056 1496 aa32.71■■■□□ 2.83
TRMU-202ENST00000381019 CSRNP3Q8WYN3 585 aa32.7■■■□□ 2.82
TRMU-202ENST00000381019 FAM9AQ8IZU1 332 aaPredicted RBP32.67■■■□□ 2.82
TRMU-202ENST00000381019 CARMIL1Q5VZK9 1371 aa32.67■■■□□ 2.82
TRMU-202ENST00000381019 ADAMTS12P58397 1594 aa32.65■■■□□ 2.82
TRMU-202ENST00000381019 CUL7Q14999 1698 aa32.62■■■□□ 2.81
TRMU-202ENST00000381019 OSCARQ8IYS5 282 aa32.56■■■□□ 2.8
TRMU-202ENST00000381019 GRIN2AQ12879 1464 aa32.54■■■□□ 2.8
TRMU-202ENST00000381019 PRXQ9BXM0 1461 aa32.51■■■□□ 2.79
TRMU-202ENST00000381019 RAPGEF2Q9Y4G8 1499 aa32.51■■■□□ 2.79
TRMU-202ENST00000381019 CHD1O14646 1710 aa32.45■■■□□ 2.79
TRMU-202ENST00000381019 NUP160Q12769 1436 aa32.38■■■□□ 2.77
TRMU-202ENST00000381019 KIF21BO75037 1637 aa32.3■■■□□ 2.76
TRMU-202ENST00000381019 CEP170Q5SW79 1584 aa32.29■■■□□ 2.76
TRMU-202ENST00000381019 GOLGA3Q08378 1498 aa32.25■■■□□ 2.75
TRMU-202ENST00000381019 KIAA0586Q9BVV6 1533 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms