RNA–Protein interactions for RNA: ENST00000487008.1

RAB17-211, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 3

Gene RAB17, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-211ENST00000487008 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
RAB17-211ENST00000487008 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
RAB17-211ENST00000487008 ABCC9O60706 1549 aa33.62■■■□□ 2.97
RAB17-211ENST00000487008 RB1CC1Q8TDY2 1594 aa32.39■■■□□ 2.78
RAB17-211ENST00000487008 NACADO15069 1562 aa32.36■■■□□ 2.77
RAB17-211ENST00000487008 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
RAB17-211ENST00000487008 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
RAB17-211ENST00000487008 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
RAB17-211ENST00000487008 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
RAB17-211ENST00000487008 UNC13AQ9UPW8 1703 aa31.65■■■□□ 2.66
RAB17-211ENST00000487008 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.62
RAB17-211ENST00000487008 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
RAB17-211ENST00000487008 PABPN1Q86U42 306 aaKnown RBP eCLIP31.39■■■□□ 2.62
RAB17-211ENST00000487008 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
RAB17-211ENST00000487008 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
RAB17-211ENST00000487008 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
RAB17-211ENST00000487008 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
RAB17-211ENST00000487008 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
RAB17-211ENST00000487008 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
RAB17-211ENST00000487008 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
RAB17-211ENST00000487008 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
RAB17-211ENST00000487008 NCAPD3P42695 1498 aa29.85■■■□□ 2.37
RAB17-211ENST00000487008 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
RAB17-211ENST00000487008 MROH2BQ7Z745 1585 aa29.82■■■□□ 2.36
RAB17-211ENST00000487008 PEG3Q9GZU2 1588 aa29.76■■■□□ 2.35
RAB17-211ENST00000487008 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
RAB17-211ENST00000487008 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
RAB17-211ENST00000487008 WIZO95785 1651 aa29.51■■■□□ 2.31
RAB17-211ENST00000487008 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
RAB17-211ENST00000487008 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
RAB17-211ENST00000487008 NESP48681 1621 aa29.09■■■□□ 2.25
RAB17-211ENST00000487008 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
RAB17-211ENST00000487008 ERCC6Q03468 1493 aa28.99■■■□□ 2.23
RAB17-211ENST00000487008 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
RAB17-211ENST00000487008 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
RAB17-211ENST00000487008 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
RAB17-211ENST00000487008 CFTRP13569 1480 aa28.81■■■□□ 2.2
RAB17-211ENST00000487008 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
RAB17-211ENST00000487008 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
RAB17-211ENST00000487008 CUX2O14529 1486 aa28.69■■■□□ 2.18
RAB17-211ENST00000487008 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
RAB17-211ENST00000487008 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.17
RAB17-211ENST00000487008 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
RAB17-211ENST00000487008 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
RAB17-211ENST00000487008 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
RAB17-211ENST00000487008 WDR62O43379 1518 aa28.48■■■□□ 2.15
RAB17-211ENST00000487008 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
RAB17-211ENST00000487008 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
RAB17-211ENST00000487008 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
RAB17-211ENST00000487008 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
RAB17-211ENST00000487008 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
RAB17-211ENST00000487008 CUX1P39880 1505 aa27.98■■■□□ 2.07
RAB17-211ENST00000487008 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
RAB17-211ENST00000487008 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.06
RAB17-211ENST00000487008 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.05
RAB17-211ENST00000487008 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
RAB17-211ENST00000487008 SOGA1O94964 1423 aa27.82■■■□□ 2.04
RAB17-211ENST00000487008 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
RAB17-211ENST00000487008 RAD54L2Q9Y4B4 1467 aa27.81■■■□□ 2.04
RAB17-211ENST00000487008 EIF4G3O43432 1585 aaKnown RBP27.78■■■□□ 2.04
RAB17-211ENST00000487008 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
RAB17-211ENST00000487008 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
RAB17-211ENST00000487008 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
RAB17-211ENST00000487008 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
RAB17-211ENST00000487008 WDR97A6NE52 1622 aa27.7■■■□□ 2.03
RAB17-211ENST00000487008 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.023e-6■■■■□ 24.7
RAB17-211ENST00000487008 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
RAB17-211ENST00000487008 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
RAB17-211ENST00000487008 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
RAB17-211ENST00000487008 GRIN2BQ13224 1484 aa27.51■■■□□ 2
RAB17-211ENST00000487008 GAPVD1Q14C86 1478 aa27.51■■■□□ 2
RAB17-211ENST00000487008 PBRM1Q86U86 1689 aa27.48■■□□□ 1.99
RAB17-211ENST00000487008 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
RAB17-211ENST00000487008 OSCARQ8IYS5 282 aa27.46■■□□□ 1.99
RAB17-211ENST00000487008 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.99
RAB17-211ENST00000487008 CHD1O14646 1710 aa27.42■■□□□ 1.98
RAB17-211ENST00000487008 FBLN2P98095 1184 aa27.34■■□□□ 1.97
RAB17-211ENST00000487008 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
RAB17-211ENST00000487008 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
RAB17-211ENST00000487008 CHMP7Q8WUX9 453 aaPredicted RBP27.29■■□□□ 1.96
RAB17-211ENST00000487008 ADAMTS12P58397 1594 aa27.26■■□□□ 1.96
RAB17-211ENST00000487008 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
RAB17-211ENST00000487008 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
RAB17-211ENST00000487008 GRIN2AQ12879 1464 aa27.17■■□□□ 1.94
RAB17-211ENST00000487008 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
RAB17-211ENST00000487008 CLASP1Q7Z460 1538 aa27.13■■□□□ 1.93
RAB17-211ENST00000487008 IGF1RP08069 1367 aa27.09■■□□□ 1.93
RAB17-211ENST00000487008 CUL7Q14999 1698 aa27.08■■□□□ 1.92
RAB17-211ENST00000487008 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
RAB17-211ENST00000487008 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
RAB17-211ENST00000487008 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
RAB17-211ENST00000487008 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
RAB17-211ENST00000487008 NUP160Q12769 1436 aa27.04■■□□□ 1.92
RAB17-211ENST00000487008 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
RAB17-211ENST00000487008 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
RAB17-211ENST00000487008 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.9
RAB17-211ENST00000487008 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
RAB17-211ENST00000487008 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
RAB17-211ENST00000487008 CHIC1Q5VXU3 224 aa26.82■■□□□ 1.88
RAB17-211ENST00000487008 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms