RNA–Protein interactions for RNA: ENST00000486620.5

TRMU-215, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 3

Gene TRMU, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-215ENST00000486620 NISCHQ9Y2I1 1504 aa38.31■■■■□ 3.72
TRMU-215ENST00000486620 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
TRMU-215ENST00000486620 ABCC9O60706 1549 aa33.79■■■■□ 3
TRMU-215ENST00000486620 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
TRMU-215ENST00000486620 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
TRMU-215ENST00000486620 NACADO15069 1562 aa32.19■■■□□ 2.74
TRMU-215ENST00000486620 MYO15BQ96JP2 1530 aa31.86■■■□□ 2.69
TRMU-215ENST00000486620 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
TRMU-215ENST00000486620 DCAF1Q9Y4B6 1507 aa31.64■■■□□ 2.66
TRMU-215ENST00000486620 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
TRMU-215ENST00000486620 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
TRMU-215ENST00000486620 BICRAQ9NZM4 1560 aa31.38■■■□□ 2.61
TRMU-215ENST00000486620 DNAJC5BQ9UF47 199 aa31.3■■■□□ 2.6
TRMU-215ENST00000486620 SCRIBQ14160 1630 aa31.2■■■□□ 2.59
TRMU-215ENST00000486620 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
TRMU-215ENST00000486620 EIF4G1Q04637 1599 aaKnown RBP30.55■■■□□ 2.48
TRMU-215ENST00000486620 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
TRMU-215ENST00000486620 CECR2Q9BXF3 1484 aa30.36■■■□□ 2.45
TRMU-215ENST00000486620 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
TRMU-215ENST00000486620 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
TRMU-215ENST00000486620 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
TRMU-215ENST00000486620 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
TRMU-215ENST00000486620 SMARCA2P51531 1590 aa29.63■■■□□ 2.33
TRMU-215ENST00000486620 MROH2BQ7Z745 1585 aa29.55■■■□□ 2.32
TRMU-215ENST00000486620 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
TRMU-215ENST00000486620 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
TRMU-215ENST00000486620 BAZ1BQ9UIG0 1483 aaKnown RBP29.44■■■□□ 2.3
TRMU-215ENST00000486620 WIZO95785 1651 aa29.22■■■□□ 2.27
TRMU-215ENST00000486620 NESP48681 1621 aa29.16■■■□□ 2.26
TRMU-215ENST00000486620 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
TRMU-215ENST00000486620 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
TRMU-215ENST00000486620 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
TRMU-215ENST00000486620 CUX2O14529 1486 aa28.87■■■□□ 2.21
TRMU-215ENST00000486620 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
TRMU-215ENST00000486620 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
TRMU-215ENST00000486620 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
TRMU-215ENST00000486620 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
TRMU-215ENST00000486620 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
TRMU-215ENST00000486620 CFTRP13569 1480 aa28.6■■■□□ 2.17
TRMU-215ENST00000486620 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
TRMU-215ENST00000486620 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
TRMU-215ENST00000486620 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
TRMU-215ENST00000486620 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
TRMU-215ENST00000486620 WDR62O43379 1518 aa28.43■■■□□ 2.14
TRMU-215ENST00000486620 DNAJC5Q9H3Z4 198 aa28.37■■■□□ 2.13
TRMU-215ENST00000486620 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
TRMU-215ENST00000486620 URB2Q14146 1524 aaKnown RBP28.27■■■□□ 2.12
TRMU-215ENST00000486620 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
TRMU-215ENST00000486620 TOPBP1Q92547 1522 aa28.04■■■□□ 2.08
TRMU-215ENST00000486620 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
TRMU-215ENST00000486620 DNMBPQ6XZF7 1577 aa27.97■■■□□ 2.07
TRMU-215ENST00000486620 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
TRMU-215ENST00000486620 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
TRMU-215ENST00000486620 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
TRMU-215ENST00000486620 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
TRMU-215ENST00000486620 CUX1P39880 1505 aa27.73■■■□□ 2.03
TRMU-215ENST00000486620 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
TRMU-215ENST00000486620 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.02
TRMU-215ENST00000486620 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
TRMU-215ENST00000486620 SOGA1O94964 1423 aa27.67■■■□□ 2.02
TRMU-215ENST00000486620 AQRO60306 1485 aaKnown RBP eCLIP27.66■■■□□ 2.023e-7■■□□□ 11.9
TRMU-215ENST00000486620 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
TRMU-215ENST00000486620 TDRD9Q8NDG6 1382 aaKnown RBP27.57■■■□□ 2
TRMU-215ENST00000486620 WDR97A6NE52 1622 aa27.45■■□□□ 1.99
TRMU-215ENST00000486620 CHD1O14646 1710 aa27.44■■□□□ 1.98
TRMU-215ENST00000486620 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
TRMU-215ENST00000486620 FBLN2P98095 1184 aa27.4■■□□□ 1.98
TRMU-215ENST00000486620 SYNJ1O43426 1573 aa27.39■■□□□ 1.98
TRMU-215ENST00000486620 BIVM-ERCC5R4GMW8 1640 aa27.39■■□□□ 1.98
TRMU-215ENST00000486620 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
TRMU-215ENST00000486620 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
TRMU-215ENST00000486620 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
TRMU-215ENST00000486620 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
TRMU-215ENST00000486620 GRIN2BQ13224 1484 aa27.36■■□□□ 1.97
TRMU-215ENST00000486620 GAPVD1Q14C86 1478 aa27.33■■□□□ 1.97
TRMU-215ENST00000486620 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
TRMU-215ENST00000486620 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
TRMU-215ENST00000486620 PBRM1Q86U86 1689 aa27.3■■□□□ 1.96
TRMU-215ENST00000486620 RIMBP3CA6NJZ7 1639 aa27.26■■□□□ 1.95
TRMU-215ENST00000486620 RIMBP3BA6NNM3 1639 aa27.26■■□□□ 1.95
TRMU-215ENST00000486620 RIMBP3Q9UFD9 1639 aa27.26■■□□□ 1.95
TRMU-215ENST00000486620 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
TRMU-215ENST00000486620 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
TRMU-215ENST00000486620 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
TRMU-215ENST00000486620 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
TRMU-215ENST00000486620 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
TRMU-215ENST00000486620 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
TRMU-215ENST00000486620 GRIN2AQ12879 1464 aa27.01■■□□□ 1.91
TRMU-215ENST00000486620 CYB5RLQ6IPT4 315 aa27.01■■□□□ 1.91
TRMU-215ENST00000486620 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
TRMU-215ENST00000486620 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
TRMU-215ENST00000486620 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
TRMU-215ENST00000486620 NUP160Q12769 1436 aa26.9■■□□□ 1.9
TRMU-215ENST00000486620 KIF27Q86VH2 1401 aa26.87■■□□□ 1.89
TRMU-215ENST00000486620 IGF1RP08069 1367 aa26.82■■□□□ 1.88
TRMU-215ENST00000486620 ERCC6L2Q5T890 1561 aa26.76■■□□□ 1.87
TRMU-215ENST00000486620 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
TRMU-215ENST00000486620 SHROOM2Q13796 1616 aa26.73■■□□□ 1.87
TRMU-215ENST00000486620 CUL7Q14999 1698 aa26.73■■□□□ 1.87
TRMU-215ENST00000486620 RUSC2Q8N2Y8 1516 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms