RNA–Protein interactions for RNA: ENST00000457572.5

TRMU-207, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 2

Gene TRMU, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-207ENST00000457572 NISCHQ9Y2I1 1504 aa46.41■■■■■ 5.02
TRMU-207ENST00000457572 CCDC180Q9P1Z9 1646 aa40.3■■■■■ 4.04
TRMU-207ENST00000457572 ZCCHC6Q5VYS8 1495 aaKnown RBP39.07■■■■□ 3.84
TRMU-207ENST00000457572 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
TRMU-207ENST00000457572 ABCC9O60706 1549 aa38.31■■■■□ 3.72
TRMU-207ENST00000457572 DCAF8L2P0C7V8 631 aa38.11■■■■□ 3.69
TRMU-207ENST00000457572 SHROOM4Q9ULL8 1493 aa38■■■■□ 3.67
TRMU-207ENST00000457572 MYO15BQ96JP2 1530 aa37.85■■■■□ 3.65
TRMU-207ENST00000457572 NACADO15069 1562 aa37.47■■■■□ 3.59
TRMU-207ENST00000457572 RB1CC1Q8TDY2 1594 aa37.19■■■■□ 3.54
TRMU-207ENST00000457572 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
TRMU-207ENST00000457572 SUPT5HO00267 1087 aaKnown RBP36.72■■■■□ 3.47
TRMU-207ENST00000457572 UNC13AQ9UPW8 1703 aa36.34■■■■□ 3.41
TRMU-207ENST00000457572 RSF1Q96T23 1441 aaPredicted RBP36.13■■■■□ 3.38
TRMU-207ENST00000457572 PABPN1Q86U42 306 aaKnown RBP eCLIP36.06■■■■□ 3.36
TRMU-207ENST00000457572 BICRAQ9NZM4 1560 aa36.03■■■■□ 3.36
TRMU-207ENST00000457572 CECR2Q9BXF3 1484 aa36.02■■■■□ 3.36
TRMU-207ENST00000457572 MROH2BQ7Z745 1585 aa35.85■■■■□ 3.33
TRMU-207ENST00000457572 BAZ1AQ9NRL2 1556 aaPredicted RBP35.8■■■■□ 3.32
TRMU-207ENST00000457572 SMARCA4P51532 1647 aa35.59■■■■□ 3.29
TRMU-207ENST00000457572 WIZO95785 1651 aa35.55■■■■□ 3.28
TRMU-207ENST00000457572 CHIC1Q5VXU3 224 aa35.38■■■■□ 3.25
TRMU-207ENST00000457572 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
TRMU-207ENST00000457572 PEG3Q9GZU2 1588 aa35.19■■■■□ 3.22
TRMU-207ENST00000457572 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
TRMU-207ENST00000457572 ATAD2BQ9ULI0 1458 aa34.94■■■■□ 3.18
TRMU-207ENST00000457572 SMARCA2P51531 1590 aa34.92■■■■□ 3.18
TRMU-207ENST00000457572 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
TRMU-207ENST00000457572 BAZ1BQ9UIG0 1483 aaKnown RBP34.74■■■■□ 3.15
TRMU-207ENST00000457572 CC2D2AQ9P2K1 1620 aa34.63■■■■□ 3.13
TRMU-207ENST00000457572 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
TRMU-207ENST00000457572 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
TRMU-207ENST00000457572 TRIM41Q8WV44 630 aa34.53■■■■□ 3.12
TRMU-207ENST00000457572 ABCC8Q09428 1581 aa34.21■■■■□ 3.07
TRMU-207ENST00000457572 DNAJC5BQ9UF47 199 aa34.2■■■■□ 3.07
TRMU-207ENST00000457572 LOC105371045A0A1W2PR82 267 aa34■■■■□ 3.03
TRMU-207ENST00000457572 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
TRMU-207ENST00000457572 CFTRP13569 1480 aa33.93■■■■□ 3.02
TRMU-207ENST00000457572 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
TRMU-207ENST00000457572 SYNJ1O43426 1573 aa33.82■■■■□ 3
TRMU-207ENST00000457572 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
TRMU-207ENST00000457572 PRDM2Q13029 1718 aa33.7■■■□□ 2.99
TRMU-207ENST00000457572 EEA1Q15075 1411 aa33.69■■■□□ 2.98
TRMU-207ENST00000457572 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
TRMU-207ENST00000457572 SOGA1O94964 1423 aa33.66■■■□□ 2.98
TRMU-207ENST00000457572 BIVM-ERCC5R4GMW8 1640 aa33.63■■■□□ 2.97
TRMU-207ENST00000457572 CUX1P39880 1505 aa33.5■■■□□ 2.95
TRMU-207ENST00000457572 RUSC2Q8N2Y8 1516 aa33.5■■■□□ 2.95
TRMU-207ENST00000457572 NESP48681 1621 aa33.46■■■□□ 2.95
TRMU-207ENST00000457572 CSRNP3Q8WYN3 585 aa33.44■■■□□ 2.94
TRMU-207ENST00000457572 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
TRMU-207ENST00000457572 FANCD2Q9BXW9 1451 aa33.34■■■□□ 2.93
TRMU-207ENST00000457572 EHMT2Q96KQ7 1210 aa33.32■■■□□ 2.92
TRMU-207ENST00000457572 KIF21BO75037 1637 aa33.22■■■□□ 2.91
TRMU-207ENST00000457572 PDS5BQ9NTI5 1447 aa33.21■■■□□ 2.91
TRMU-207ENST00000457572 GOLGA3Q08378 1498 aa33.21■■■□□ 2.91
TRMU-207ENST00000457572 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
TRMU-207ENST00000457572 TNIKQ9UKE5 1360 aa33.19■■■□□ 2.9
TRMU-207ENST00000457572 DNMBPQ6XZF7 1577 aa33.1■■■□□ 2.89
TRMU-207ENST00000457572 KIF27Q86VH2 1401 aa33.1■■■□□ 2.89
TRMU-207ENST00000457572 FGD5Q6ZNL6 1462 aa33.08■■■□□ 2.89
TRMU-207ENST00000457572 KIF21AQ7Z4S6 1674 aa33.02■■■□□ 2.88
TRMU-207ENST00000457572 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
TRMU-207ENST00000457572 CEP162Q5TB80 1403 aa33.01■■■□□ 2.88
TRMU-207ENST00000457572 UBTFP17480 764 aaKnown RBP32.99■■■□□ 2.87
TRMU-207ENST00000457572 PRXQ9BXM0 1461 aa32.99■■■□□ 2.87
TRMU-207ENST00000457572 RAPGEF2Q9Y4G8 1499 aa32.96■■■□□ 2.87
TRMU-207ENST00000457572 ERICH3Q5RHP9 1530 aa32.95■■■□□ 2.87
TRMU-207ENST00000457572 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
TRMU-207ENST00000457572 CUX2O14529 1486 aa32.92■■■□□ 2.86
TRMU-207ENST00000457572 URB2Q14146 1524 aaKnown RBP32.91■■■□□ 2.86
TRMU-207ENST00000457572 POLA1P09884 1462 aaPredicted RBP32.89■■■□□ 2.86
TRMU-207ENST00000457572 ABCA10Q8WWZ4 1543 aa32.82■■■□□ 2.84
TRMU-207ENST00000457572 MRC2Q9UBG0 1479 aa32.8■■■□□ 2.84
TRMU-207ENST00000457572 IGF1RP08069 1367 aa32.78■■■□□ 2.84
TRMU-207ENST00000457572 PCGF6Q9BYE7 350 aa32.77■■■□□ 2.84
TRMU-207ENST00000457572 RAD54L2Q9Y4B4 1467 aa32.76■■■□□ 2.83
TRMU-207ENST00000457572 TRIM26Q12899 539 aaPredicted RBP32.74■■■□□ 2.83
TRMU-207ENST00000457572 CLIP1P30622 1438 aa32.68■■■□□ 2.82
TRMU-207ENST00000457572 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
TRMU-207ENST00000457572 WDR62O43379 1518 aa32.62■■■□□ 2.81
TRMU-207ENST00000457572 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
TRMU-207ENST00000457572 CARMIL1Q5VZK9 1371 aa32.61■■■□□ 2.81
TRMU-207ENST00000457572 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.8
TRMU-207ENST00000457572 TARBP1Q13395 1621 aaKnown RBP32.5■■■□□ 2.79
TRMU-207ENST00000457572 CUL7Q14999 1698 aa32.48■■■□□ 2.79
TRMU-207ENST00000457572 VPS8Q8N3P4 1428 aa32.47■■■□□ 2.79
TRMU-207ENST00000457572 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
TRMU-207ENST00000457572 TDRD9Q8NDG6 1382 aaKnown RBP32.41■■■□□ 2.78
TRMU-207ENST00000457572 ARAP1Q96P48 1450 aa32.33■■■□□ 2.77
TRMU-207ENST00000457572 PPARGC1BQ86YN6 1023 aaKnown RBP32.33■■■□□ 2.77
TRMU-207ENST00000457572 IFT140Q96RY7 1462 aa32.32■■■□□ 2.76
TRMU-207ENST00000457572 RANGAP1P46060 587 aaPredicted RBP32.31■■■□□ 2.76
TRMU-207ENST00000457572 ARHGAP35Q9NRY4 1499 aa32.28■■■□□ 2.76
TRMU-207ENST00000457572 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
TRMU-207ENST00000457572 ZNF608Q9ULD9 1512 aaPredicted RBP32.16■■■□□ 2.74
TRMU-207ENST00000457572 AQRO60306 1485 aaKnown RBP eCLIP32.15■■■□□ 2.744e-7■■■■□ 21
TRMU-207ENST00000457572 CTTNBP2Q8WZ74 1663 aa32.14■■■□□ 2.74
TRMU-207ENST00000457572 HRCP23327 699 aa32.14■■■□□ 2.74
TRMU-207ENST00000457572 GRIN2BQ13224 1484 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms