RNA–Protein interactions for RNA: ENST00000589480.5

PRKAR1A-219, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-219ENST00000589480 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
PRKAR1A-219ENST00000589480 ABCC9O60706 1549 aa22.92■■□□□ 1.26
PRKAR1A-219ENST00000589480 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
PRKAR1A-219ENST00000589480 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
PRKAR1A-219ENST00000589480 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
PRKAR1A-219ENST00000589480 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
PRKAR1A-219ENST00000589480 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
PRKAR1A-219ENST00000589480 NACADO15069 1562 aa21.37■■□□□ 1.01
PRKAR1A-219ENST00000589480 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
PRKAR1A-219ENST00000589480 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
PRKAR1A-219ENST00000589480 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
PRKAR1A-219ENST00000589480 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
PRKAR1A-219ENST00000589480 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
PRKAR1A-219ENST00000589480 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
PRKAR1A-219ENST00000589480 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.89
PRKAR1A-219ENST00000589480 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
PRKAR1A-219ENST00000589480 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
PRKAR1A-219ENST00000589480 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
PRKAR1A-219ENST00000589480 DNAJC5Q9H3Z4 198 aa20.13■□□□□ 0.81
PRKAR1A-219ENST00000589480 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
PRKAR1A-219ENST00000589480 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
PRKAR1A-219ENST00000589480 CUX2O14529 1486 aa19.75■□□□□ 0.75
PRKAR1A-219ENST00000589480 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
PRKAR1A-219ENST00000589480 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
PRKAR1A-219ENST00000589480 NESP48681 1621 aa19.58■□□□□ 0.73
PRKAR1A-219ENST00000589480 SMARCA4P51532 1647 aa19.55■□□□□ 0.72
PRKAR1A-219ENST00000589480 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
PRKAR1A-219ENST00000589480 BAZ1BQ9UIG0 1483 aaKnown RBP19.53■□□□□ 0.72
PRKAR1A-219ENST00000589480 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
PRKAR1A-219ENST00000589480 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
PRKAR1A-219ENST00000589480 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
PRKAR1A-219ENST00000589480 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
PRKAR1A-219ENST00000589480 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
PRKAR1A-219ENST00000589480 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
PRKAR1A-219ENST00000589480 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
PRKAR1A-219ENST00000589480 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
PRKAR1A-219ENST00000589480 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
PRKAR1A-219ENST00000589480 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
PRKAR1A-219ENST00000589480 WIZO95785 1651 aa19.05■□□□□ 0.64
PRKAR1A-219ENST00000589480 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
PRKAR1A-219ENST00000589480 WDR62O43379 1518 aa19.02■□□□□ 0.64
PRKAR1A-219ENST00000589480 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
PRKAR1A-219ENST00000589480 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
PRKAR1A-219ENST00000589480 CFTRP13569 1480 aa18.9■□□□□ 0.62
PRKAR1A-219ENST00000589480 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
PRKAR1A-219ENST00000589480 URB2Q14146 1524 aaKnown RBP18.81■□□□□ 0.6
PRKAR1A-219ENST00000589480 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
PRKAR1A-219ENST00000589480 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
PRKAR1A-219ENST00000589480 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
PRKAR1A-219ENST00000589480 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
PRKAR1A-219ENST00000589480 FBLN2P98095 1184 aa18.6■□□□□ 0.57
PRKAR1A-219ENST00000589480 CYB5RLQ6IPT4 315 aa18.6■□□□□ 0.57
PRKAR1A-219ENST00000589480 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
PRKAR1A-219ENST00000589480 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
PRKAR1A-219ENST00000589480 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
PRKAR1A-219ENST00000589480 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
PRKAR1A-219ENST00000589480 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
PRKAR1A-219ENST00000589480 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
PRKAR1A-219ENST00000589480 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
PRKAR1A-219ENST00000589480 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
PRKAR1A-219ENST00000589480 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
PRKAR1A-219ENST00000589480 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
PRKAR1A-219ENST00000589480 DNMBPQ6XZF7 1577 aa18.45■□□□□ 0.54
PRKAR1A-219ENST00000589480 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
PRKAR1A-219ENST00000589480 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
PRKAR1A-219ENST00000589480 SOGA1O94964 1423 aa18.37■□□□□ 0.53
PRKAR1A-219ENST00000589480 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
PRKAR1A-219ENST00000589480 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
PRKAR1A-219ENST00000589480 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
PRKAR1A-219ENST00000589480 ARAP1Q96P48 1450 aa18.33■□□□□ 0.53
PRKAR1A-219ENST00000589480 CHD1O14646 1710 aa18.32■□□□□ 0.52
PRKAR1A-219ENST00000589480 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
PRKAR1A-219ENST00000589480 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
PRKAR1A-219ENST00000589480 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
PRKAR1A-219ENST00000589480 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
PRKAR1A-219ENST00000589480 CUX1P39880 1505 aa18.16■□□□□ 0.5
PRKAR1A-219ENST00000589480 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
PRKAR1A-219ENST00000589480 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
PRKAR1A-219ENST00000589480 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
PRKAR1A-219ENST00000589480 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
PRKAR1A-219ENST00000589480 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
PRKAR1A-219ENST00000589480 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
PRKAR1A-219ENST00000589480 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
PRKAR1A-219ENST00000589480 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
PRKAR1A-219ENST00000589480 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
PRKAR1A-219ENST00000589480 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
PRKAR1A-219ENST00000589480 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
PRKAR1A-219ENST00000589480 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
PRKAR1A-219ENST00000589480 ERCC6L2Q5T890 1561 aa17.89■□□□□ 0.45
PRKAR1A-219ENST00000589480 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
PRKAR1A-219ENST00000589480 NUP160Q12769 1436 aa17.85■□□□□ 0.45
PRKAR1A-219ENST00000589480 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
PRKAR1A-219ENST00000589480 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
PRKAR1A-219ENST00000589480 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
PRKAR1A-219ENST00000589480 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
PRKAR1A-219ENST00000589480 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
PRKAR1A-219ENST00000589480 FAM69CQ0P6D2 419 aa17.76■□□□□ 0.43
PRKAR1A-219ENST00000589480 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
PRKAR1A-219ENST00000589480 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
PRKAR1A-219ENST00000589480 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms