RNA–Protein interactions for RNA: ENST00000417232.6

CCDC144NL-AS1-201, CCDC144NL antisense RNA 1, humanhuman

TSL 3

Gene CCDC144NL-AS1, Length 709 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-201ENST00000417232 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
CCDC144NL-AS1-201ENST00000417232 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
CCDC144NL-AS1-201ENST00000417232 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
CCDC144NL-AS1-201ENST00000417232 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
CCDC144NL-AS1-201ENST00000417232 FOXD1Q16676 465 aa23.25■■□□□ 1.31
CCDC144NL-AS1-201ENST00000417232 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
CCDC144NL-AS1-201ENST00000417232 MSH5O43196 834 aa21.88■■□□□ 1.09
CCDC144NL-AS1-201ENST00000417232 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
CCDC144NL-AS1-201ENST00000417232 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
CCDC144NL-AS1-201ENST00000417232 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
CCDC144NL-AS1-201ENST00000417232 ADRA2BP18089 450 aa21.53■■□□□ 1.04
CCDC144NL-AS1-201ENST00000417232 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
CCDC144NL-AS1-201ENST00000417232 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
CCDC144NL-AS1-201ENST00000417232 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
CCDC144NL-AS1-201ENST00000417232 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
CCDC144NL-AS1-201ENST00000417232 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
CCDC144NL-AS1-201ENST00000417232 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
CCDC144NL-AS1-201ENST00000417232 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
CCDC144NL-AS1-201ENST00000417232 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
CCDC144NL-AS1-201ENST00000417232 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
CCDC144NL-AS1-201ENST00000417232 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
CCDC144NL-AS1-201ENST00000417232 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
CCDC144NL-AS1-201ENST00000417232 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
CCDC144NL-AS1-201ENST00000417232 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
CCDC144NL-AS1-201ENST00000417232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC144NL-AS1-201ENST00000417232 NPM3O75607 178 aaKnown RBP18.08■□□□□ 0.48
CCDC144NL-AS1-201ENST00000417232 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
CCDC144NL-AS1-201ENST00000417232 KCNA4P22459 653 aa17.55■□□□□ 0.4
CCDC144NL-AS1-201ENST00000417232 CAPN15O75808 1086 aa17.51■□□□□ 0.39
CCDC144NL-AS1-201ENST00000417232 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
CCDC144NL-AS1-201ENST00000417232 DSG3P32926 999 aa17.37■□□□□ 0.37
CCDC144NL-AS1-201ENST00000417232 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
CCDC144NL-AS1-201ENST00000417232 APLP2Q06481 763 aa17.19■□□□□ 0.34
CCDC144NL-AS1-201ENST00000417232 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
CCDC144NL-AS1-201ENST00000417232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
CCDC144NL-AS1-201ENST00000417232 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
CCDC144NL-AS1-201ENST00000417232 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
CCDC144NL-AS1-201ENST00000417232 ABCB7O75027 752 aa17.07■□□□□ 0.32
CCDC144NL-AS1-201ENST00000417232 POTEHQ6S545 545 aa17■□□□□ 0.31
CCDC144NL-AS1-201ENST00000417232 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
CCDC144NL-AS1-201ENST00000417232 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
CCDC144NL-AS1-201ENST00000417232 POLA2Q14181 598 aa16.63■□□□□ 0.25
CCDC144NL-AS1-201ENST00000417232 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
CCDC144NL-AS1-201ENST00000417232 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
CCDC144NL-AS1-201ENST00000417232 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
CCDC144NL-AS1-201ENST00000417232 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
CCDC144NL-AS1-201ENST00000417232 CHRDL2Q6WN34 429 aa16.33■□□□□ 0.2
CCDC144NL-AS1-201ENST00000417232 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
CCDC144NL-AS1-201ENST00000417232 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
CCDC144NL-AS1-201ENST00000417232 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
CCDC144NL-AS1-201ENST00000417232 ZBTB22O15209 634 aa16.07■□□□□ 0.16
CCDC144NL-AS1-201ENST00000417232 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
CCDC144NL-AS1-201ENST00000417232 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
CCDC144NL-AS1-201ENST00000417232 PIP4P2Q8N4L2 257 aa15.89■□□□□ 0.13
CCDC144NL-AS1-201ENST00000417232 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
CCDC144NL-AS1-201ENST00000417232 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
CCDC144NL-AS1-201ENST00000417232 FBLN2P98095 1184 aa15.81■□□□□ 0.12
CCDC144NL-AS1-201ENST00000417232 HAX1O00165 279 aa15.74■□□□□ 0.11
CCDC144NL-AS1-201ENST00000417232 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
CCDC144NL-AS1-201ENST00000417232 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
CCDC144NL-AS1-201ENST00000417232 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC144NL-AS1-201ENST00000417232 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
CCDC144NL-AS1-201ENST00000417232 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
CCDC144NL-AS1-201ENST00000417232 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
CCDC144NL-AS1-201ENST00000417232 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CCDC144NL-AS1-201ENST00000417232 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
CCDC144NL-AS1-201ENST00000417232 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
CCDC144NL-AS1-201ENST00000417232 SSUH2Q9Y2M2 353 aa15.44■□□□□ 0.06
CCDC144NL-AS1-201ENST00000417232 EVX2Q03828 476 aa15.43■□□□□ 0.06
CCDC144NL-AS1-201ENST00000417232 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCDC144NL-AS1-201ENST00000417232 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
CCDC144NL-AS1-201ENST00000417232 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
CCDC144NL-AS1-201ENST00000417232 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
CCDC144NL-AS1-201ENST00000417232 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
CCDC144NL-AS1-201ENST00000417232 GABBR2O75899 941 aa15.1■□□□□ 0.01
CCDC144NL-AS1-201ENST00000417232 FARP1Q9Y4F1 1045 aaPredicted RBP14.99□□□□□ -0.01
CCDC144NL-AS1-201ENST00000417232 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
CCDC144NL-AS1-201ENST00000417232 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
CCDC144NL-AS1-201ENST00000417232 LHX8Q68G74 356 aa14.86□□□□□ -0.03
CCDC144NL-AS1-201ENST00000417232 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
CCDC144NL-AS1-201ENST00000417232 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
CCDC144NL-AS1-201ENST00000417232 CLCN6P51797 869 aa14.78□□□□□ -0.04
CCDC144NL-AS1-201ENST00000417232 CREBZFQ9NS37 354 aa14.76□□□□□ -0.05
CCDC144NL-AS1-201ENST00000417232 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
CCDC144NL-AS1-201ENST00000417232 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
CCDC144NL-AS1-201ENST00000417232 DCBLD2Q96PD2 775 aa14.72□□□□□ -0.05
CCDC144NL-AS1-201ENST00000417232 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
CCDC144NL-AS1-201ENST00000417232 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
CCDC144NL-AS1-201ENST00000417232 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCDC144NL-AS1-201ENST00000417232 GALR2O43603 387 aaPredicted RBP14.54□□□□□ -0.08
CCDC144NL-AS1-201ENST00000417232 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
CCDC144NL-AS1-201ENST00000417232 MNX1P50219 401 aaPredicted RBP14.43□□□□□ -0.1
CCDC144NL-AS1-201ENST00000417232 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
CCDC144NL-AS1-201ENST00000417232 MS4A3Q96HJ5 214 aa14.28□□□□□ -0.12
CCDC144NL-AS1-201ENST00000417232 PROM2Q8N271 834 aa14.27□□□□□ -0.13
CCDC144NL-AS1-201ENST00000417232 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
CCDC144NL-AS1-201ENST00000417232 OTUD5Q96G74 571 aa14.26□□□□□ -0.13
CCDC144NL-AS1-201ENST00000417232 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
CCDC144NL-AS1-201ENST00000417232 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
CCDC144NL-AS1-201ENST00000417232 MIER1Q8N108 512 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms