Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 FAM234A-208ENST00000421000 739 ntTSL 318.36■□□□□ 0.535e-8■□□□□ 8.8
DDX3XO00571 RSF1-206ENST00000528095 2107 ntTSL 1 (best)18.36■□□□□ 0.535e-8■□□□□ 8.8
DDX3XO00571 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.471e-11■□□□□ 8.8
DDX3XO00571 TMEM135-204ENST00000526733 496 ntTSL 217.78■□□□□ 0.442e-14■□□□□ 8.8
DDX3XO00571 RSF1-208ENST00000530604 520 ntTSL 217.48■□□□□ 0.395e-8■□□□□ 8.8
DDX3XO00571 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.47■□□□□ 0.392e-14■□□□□ 8.8
DDX3XO00571 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.335e-8■□□□□ 8.8
DDX3XO00571 PCED1A-203ENST00000439542 1187 ntTSL 216.32■□□□□ 0.25e-8■□□□□ 8.8
DDX3XO00571 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.25e-8■□□□□ 8.8
DDX3XO00571 RSF1-203ENST00000467567 2982 ntTSL 216.06■□□□□ 0.165e-8■□□□□ 8.8
DDX3XO00571 GYG2-207ENST00000469234 566 ntTSL 315.67■□□□□ 0.15e-8■□□□□ 8.8
DDX3XO00571 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.25■□□□□ 0.034e-15■□□□□ 8.8
DDX3XO00571 PUM2-211ENST00000446940 525 ntTSL 415.24■□□□□ 0.035e-8■□□□□ 8.8
DDX3XO00571 SLC26A6-211ENST00000431739 588 ntTSL 314.84□□□□□ -0.034e-15■□□□□ 8.8
DDX3XO00571 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.6□□□□□ -0.074e-15■□□□□ 8.8
DDX3XO00571 SLC26A6-209ENST00000426599 555 ntTSL 414.45□□□□□ -0.14e-15■□□□□ 8.8
DDX3XO00571 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-11■□□□□ 8.8
DDX3XO00571 ERF-207ENST00000598965 264 ntTSL 314.34□□□□□ -0.115e-8■□□□□ 8.8
DDX3XO00571 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)14.31□□□□□ -0.124e-15■□□□□ 8.8
DDX3XO00571 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC14.03□□□□□ -0.164e-15■□□□□ 8.8
DDX3XO00571 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.184e-15■□□□□ 8.8
DDX3XO00571 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.214e-15■□□□□ 8.8
DDX3XO00571 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.214e-15■□□□□ 8.8
DDX3XO00571 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.374e-15■□□□□ 8.8
DDX3XO00571 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.431e-11■□□□□ 8.8
DDX3XO00571 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.551e-11■□□□□ 8.8
DDX3XO00571 RERE-213ENST00000480342 2710 ntTSL 210.76□□□□□ -0.694e-15■□□□□ 8.8
DDX3XO00571 COPS7B-212ENST00000436564 474 ntTSL 310.51□□□□□ -0.735e-8■□□□□ 8.8
DDX3XO00571 SMURF2P1-202ENST00000579301 570 ntTSL 5 BASIC10.51□□□□□ -0.734e-15■□□□□ 8.8
DDX3XO00571 EPAS1-209ENST00000475822 551 ntTSL 49.9□□□□□ -0.825e-8■□□□□ 8.8
DDX3XO00571 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.931e-11■□□□□ 8.8
DDX3XO00571 TMEM135-203ENST00000525018 753 ntTSL 59.24□□□□□ -0.932e-14■□□□□ 8.8
DDX3XO00571 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.095e-8■□□□□ 8.8
DDX3XO00571 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.94□□□□□ -1.142e-14■□□□□ 8.8
DDX3XO00571 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.161e-11■□□□□ 8.8
DDX3XO00571 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.242e-14■□□□□ 8.8
DDX3XO00571 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.77□□□□□ -1.335e-8■□□□□ 8.8
DDX3XO00571 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.56□□□□□ -1.365e-8■□□□□ 8.8
DDX3XO00571 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.45e-8■□□□□ 8.8
DDX3XO00571 TMEM135-206ENST00000529023 1095 ntTSL 26.25□□□□□ -1.412e-14■□□□□ 8.8
DDX3XO00571 SMURF2P1-201ENST00000514992 481 ntBASIC4.54□□□□□ -1.684e-15■□□□□ 8.8
DDX3XO00571 PPP4R4-206ENST00000556884 564 ntTSL 43.86□□□□□ -1.795e-8■□□□□ 8.8
DDX3XO00571 AHCY-206ENST00000606061 1170 ntTSL 220.7■□□□□ 0.91e-30■□□□□ 8.8
DDX3XO00571 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.361e-30■□□□□ 8.8
DDX3XO00571 AHCY-204ENST00000480653 2211 ntTSL 216.66■□□□□ 0.261e-30■□□□□ 8.8
DDX3XO00571 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.16■□□□□ 0.021e-30■□□□□ 8.8
DDX3XO00571 DARS-208ENST00000474184 431 ntTSL 26.36□□□□□ -1.392e-12■□□□□ 8.8
DDX3XO00571 SERPINA5-213ENST00000557598 607 ntTSL 28.89□□□□□ -0.992e-28■□□□□ 8.8
DDX3XO00571 FNTA-214ENST00000533998 581 ntTSL 325.99■■□□□ 1.754e-7■□□□□ 8.8
DDX3XO00571 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.684e-7■□□□□ 8.8
DDX3XO00571 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.474e-7■□□□□ 8.8
DDX3XO00571 SFSWAP-204ENST00000535399 778 ntTSL 223.62■■□□□ 1.374e-7■□□□□ 8.8
DDX3XO00571 FNTA-202ENST00000524546 750 ntTSL 323.6■■□□□ 1.374e-7■□□□□ 8.8
DDX3XO00571 FNTA-212ENST00000533383 982 ntTSL 523.6■■□□□ 1.374e-7■□□□□ 8.8
DDX3XO00571 LUC7L-219ENST00000494545 725 ntTSL 522.81■■□□□ 1.244e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.6■■□□□ 1.212e-13■□□□□ 8.8
DDX3XO00571 LUC7L-207ENST00000426094 2737 ntTSL 1 (best)21.33■■□□□ 14e-7■□□□□ 8.8
DDX3XO00571 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.864e-7■□□□□ 8.8
DDX3XO00571 FNTA-206ENST00000527153 582 ntTSL 320.35■□□□□ 0.854e-7■□□□□ 8.8
DDX3XO00571 SFSWAP-207ENST00000538548 2636 ntTSL 520.12■□□□□ 0.814e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-213ENST00000566426 283 ntTSL 519.79■□□□□ 0.762e-13■□□□□ 8.8
DDX3XO00571 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.63■□□□□ 0.734e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-207ENST00000562119 884 ntTSL 519.56■□□□□ 0.722e-13■□□□□ 8.8
DDX3XO00571 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.694e-7■□□□□ 8.8
DDX3XO00571 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.674e-7■□□□□ 8.8
DDX3XO00571 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.12■□□□□ 0.654e-7■□□□□ 8.8
DDX3XO00571 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.75■□□□□ 0.594e-7■□□□□ 8.8
DDX3XO00571 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)18.39■□□□□ 0.544e-7■□□□□ 8.8
DDX3XO00571 DNPEP-206ENST00000429013 896 ntTSL 518.29■□□□□ 0.524e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.92■□□□□ 0.462e-13■□□□□ 8.8
DDX3XO00571 FBXL18-202ENST00000415009 2526 ntTSL 216.59■□□□□ 0.254e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-209ENST00000563667 554 ntTSL 416.48■□□□□ 0.232e-13■□□□□ 8.8
DDX3XO00571 FNTA-205ENST00000526755 4676 ntTSL 1 (best)16.21■□□□□ 0.194e-7■□□□□ 8.8
DDX3XO00571 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.114e-7■□□□□ 8.8
DDX3XO00571 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.054e-7■□□□□ 8.8
DDX3XO00571 LUC7L-217ENST00000490762 2643 ntTSL 1 (best)14.92□□□□□ -0.024e-7■□□□□ 8.8
DDX3XO00571 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.084e-7■□□□□ 8.8
DDX3XO00571 LUC7L-206ENST00000419516 1211 ntTSL 514.51□□□□□ -0.094e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC14.49□□□□□ -0.092e-13■□□□□ 8.8
DDX3XO00571 DNPEP-207ENST00000430206 577 ntTSL 314.44□□□□□ -0.14e-7■□□□□ 8.8
DDX3XO00571 SFSWAP-209ENST00000540469 3536 ntTSL 313.85□□□□□ -0.194e-7■□□□□ 8.8
DDX3XO00571 LUC7L-205ENST00000418978 989 ntTSL 512.73□□□□□ -0.374e-7■□□□□ 8.8
DDX3XO00571 LUC7L-210ENST00000430864 695 ntTSL 512.69□□□□□ -0.384e-7■□□□□ 8.8
DDX3XO00571 FNTA-209ENST00000531266 590 ntTSL 512.57□□□□□ -0.44e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-217ENST00000570001 4828 ntTSL 212.52□□□□□ -0.412e-13■□□□□ 8.8
DDX3XO00571 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.412e-13■□□□□ 8.8
DDX3XO00571 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC12.39□□□□□ -0.434e-7■□□□□ 8.8
DDX3XO00571 FNTA-211ENST00000533368 534 ntTSL 212.33□□□□□ -0.444e-7■□□□□ 8.8
DDX3XO00571 SCG3-202ENST00000542355 2163 ntTSL 2 BASIC11.86□□□□□ -0.514e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-216ENST00000569715 3775 ntTSL 1 (best) BASIC11.79□□□□□ -0.522e-13■□□□□ 8.8
DDX3XO00571 PDXDC1-211ENST00000565362 720 ntTSL 510.82□□□□□ -0.682e-13■□□□□ 8.8
DDX3XO00571 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC10.81□□□□□ -0.682e-13■□□□□ 8.8
DDX3XO00571 ZNF830-201ENST00000361952 2246 ntAPPRIS P1 BASIC10.61□□□□□ -0.714e-7■□□□□ 8.8
DDX3XO00571 OOEP-203ENST00000441145 964 ntTSL 310.53□□□□□ -0.724e-7■□□□□ 8.8
DDX3XO00571 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.034e-7■□□□□ 8.8
DDX3XO00571 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.054e-7■□□□□ 8.8
DDX3XO00571 FNTA-213ENST00000533559 429 ntTSL 38.35□□□□□ -1.074e-7■□□□□ 8.8
DDX3XO00571 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.07□□□□□ -1.122e-13■□□□□ 8.8
DDX3XO00571 PDXDC1-208ENST00000563522 556 ntTSL 48.06□□□□□ -1.122e-13■□□□□ 8.8
DDX3XO00571 SCG3-203ENST00000558709 896 ntTSL 27.6□□□□□ -1.194e-7■□□□□ 8.8
Retrieved 100 of 47,714 protein–RNA pairs in 4192.7 ms