RNA–Protein interactions for RNA: ENST00000439542.1

PCED1A-203, Transcript of PC-esterase domain containing 1A, humanhuman

TSL 2

Gene PCED1A, Length 1,187 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1A-203ENST00000439542 NISCHQ9Y2I1 1504 aa39.61■■■■□ 3.93
PCED1A-203ENST00000439542 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
PCED1A-203ENST00000439542 ABCC9O60706 1549 aa35.48■■■■□ 3.27
PCED1A-203ENST00000439542 RB1CC1Q8TDY2 1594 aa33.82■■■■□ 3
PCED1A-203ENST00000439542 NACADO15069 1562 aa33.58■■■□□ 2.97
PCED1A-203ENST00000439542 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
PCED1A-203ENST00000439542 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
PCED1A-203ENST00000439542 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
PCED1A-203ENST00000439542 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
PCED1A-203ENST00000439542 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.871e-6■■□□□ 11.5
PCED1A-203ENST00000439542 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
PCED1A-203ENST00000439542 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
PCED1A-203ENST00000439542 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
PCED1A-203ENST00000439542 SCRIBQ14160 1630 aa32.45■■■□□ 2.79
PCED1A-203ENST00000439542 SHROOM4Q9ULL8 1493 aa32.38■■■□□ 2.77
PCED1A-203ENST00000439542 CC2D2AQ9P2K1 1620 aa32.07■■■□□ 2.72
PCED1A-203ENST00000439542 EIF4G1Q04637 1599 aaKnown RBP32.01■■■□□ 2.71
PCED1A-203ENST00000439542 CECR2Q9BXF3 1484 aa31.94■■■□□ 2.7
PCED1A-203ENST00000439542 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
PCED1A-203ENST00000439542 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
PCED1A-203ENST00000439542 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.54
PCED1A-203ENST00000439542 SMARCA2P51531 1590 aa30.85■■■□□ 2.53
PCED1A-203ENST00000439542 HMGXB3Q12766 1538 aa30.8■■■□□ 2.52
PCED1A-203ENST00000439542 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
PCED1A-203ENST00000439542 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
PCED1A-203ENST00000439542 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
PCED1A-203ENST00000439542 PEG3Q9GZU2 1588 aa30.6■■■□□ 2.49
PCED1A-203ENST00000439542 CUX2O14529 1486 aa30.54■■■□□ 2.48
PCED1A-203ENST00000439542 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
PCED1A-203ENST00000439542 NESP48681 1621 aa30.49■■■□□ 2.47
PCED1A-203ENST00000439542 DNAJC5Q9H3Z4 198 aa30.36■■■□□ 2.45
PCED1A-203ENST00000439542 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
PCED1A-203ENST00000439542 WIZO95785 1651 aa30.21■■■□□ 2.43
PCED1A-203ENST00000439542 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
PCED1A-203ENST00000439542 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
PCED1A-203ENST00000439542 PDS5BQ9NTI5 1447 aa30.09■■■□□ 2.41
PCED1A-203ENST00000439542 CADPSQ9ULU8 1353 aa30.02■■■□□ 2.4
PCED1A-203ENST00000439542 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
PCED1A-203ENST00000439542 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
PCED1A-203ENST00000439542 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
PCED1A-203ENST00000439542 WDR62O43379 1518 aa29.8■■■□□ 2.36
PCED1A-203ENST00000439542 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
PCED1A-203ENST00000439542 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
PCED1A-203ENST00000439542 CFTRP13569 1480 aa29.7■■■□□ 2.35
PCED1A-203ENST00000439542 PRDM2Q13029 1718 aa29.56■■■□□ 2.32
PCED1A-203ENST00000439542 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
PCED1A-203ENST00000439542 CCDC88BA6NC98 1476 aa29.44■■■□□ 2.3
PCED1A-203ENST00000439542 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
PCED1A-203ENST00000439542 IFT140Q96RY7 1462 aa29.15■■■□□ 2.26
PCED1A-203ENST00000439542 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
PCED1A-203ENST00000439542 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
PCED1A-203ENST00000439542 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
PCED1A-203ENST00000439542 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
PCED1A-203ENST00000439542 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
PCED1A-203ENST00000439542 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
PCED1A-203ENST00000439542 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
PCED1A-203ENST00000439542 POLA1P09884 1462 aaPredicted RBP28.87■■■□□ 2.21
PCED1A-203ENST00000439542 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.28e-15■■■■■ 113.6
PCED1A-203ENST00000439542 RIMBP3CA6NJZ7 1639 aa28.81■■■□□ 2.2
PCED1A-203ENST00000439542 RIMBP3BA6NNM3 1639 aa28.81■■■□□ 2.2
PCED1A-203ENST00000439542 RIMBP3Q9UFD9 1639 aa28.81■■■□□ 2.2
PCED1A-203ENST00000439542 CHD1O14646 1710 aa28.8■■■□□ 2.2
PCED1A-203ENST00000439542 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
PCED1A-203ENST00000439542 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
PCED1A-203ENST00000439542 SOGA1O94964 1423 aa28.71■■■□□ 2.19
PCED1A-203ENST00000439542 ARHGEF11O15085 1522 aa28.7■■■□□ 2.19
PCED1A-203ENST00000439542 CUX1P39880 1505 aa28.69■■■□□ 2.18
PCED1A-203ENST00000439542 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
PCED1A-203ENST00000439542 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
PCED1A-203ENST00000439542 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
PCED1A-203ENST00000439542 FBLN2P98095 1184 aa28.63■■■□□ 2.17
PCED1A-203ENST00000439542 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
PCED1A-203ENST00000439542 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
PCED1A-203ENST00000439542 GRIN2BQ13224 1484 aa28.48■■■□□ 2.15
PCED1A-203ENST00000439542 PBRM1Q86U86 1689 aa28.47■■■□□ 2.15
PCED1A-203ENST00000439542 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
PCED1A-203ENST00000439542 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
PCED1A-203ENST00000439542 ARAP1Q96P48 1450 aa28.41■■■□□ 2.14
PCED1A-203ENST00000439542 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
PCED1A-203ENST00000439542 CLASP1Q7Z460 1538 aa28.4■■■□□ 2.14
PCED1A-203ENST00000439542 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
PCED1A-203ENST00000439542 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
PCED1A-203ENST00000439542 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
PCED1A-203ENST00000439542 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
PCED1A-203ENST00000439542 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
PCED1A-203ENST00000439542 TOP2BQ02880 1626 aa28.27■■■□□ 2.12
PCED1A-203ENST00000439542 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.12
PCED1A-203ENST00000439542 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
PCED1A-203ENST00000439542 TRHP20396 242 aaPredicted RBP28.13■■■□□ 2.09
PCED1A-203ENST00000439542 GRIN2AQ12879 1464 aa28.13■■■□□ 2.09
PCED1A-203ENST00000439542 CEP170Q5SW79 1584 aa28.04■■■□□ 2.08
PCED1A-203ENST00000439542 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
PCED1A-203ENST00000439542 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
PCED1A-203ENST00000439542 NUP160Q12769 1436 aa28.01■■■□□ 2.07
PCED1A-203ENST00000439542 ERCC6L2Q5T890 1561 aa27.97■■■□□ 2.07
PCED1A-203ENST00000439542 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
PCED1A-203ENST00000439542 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
PCED1A-203ENST00000439542 PRG4Q92954 1404 aaPredicted RBP27.74■■■□□ 2.03
PCED1A-203ENST00000439542 CUL7Q14999 1698 aa27.69■■■□□ 2.02
PCED1A-203ENST00000439542 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms